RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 FAM193BQ96PV7 902 aaPredicted RBP10.54□□□□□ -0.72
CHD8-204ENST00000553622 PI4K2AQ9BTU6 479 aa10.54□□□□□ -0.72
CHD8-204ENST00000553622 IMPG2Q9BZV3 1241 aa10.54□□□□□ -0.72
CHD8-204ENST00000553622 SLC38A7Q9NVC3 462 aa10.54□□□□□ -0.72
CHD8-204ENST00000553622 UBQLN1Q9UMX0 589 aaKnown RBP10.54□□□□□ -0.72
CHD8-204ENST00000553622 DERAQ9Y315 318 aa10.54□□□□□ -0.72
CHD8-204ENST00000553622 C2CD2Q9Y426 696 aa10.54□□□□□ -0.72
CHD8-204ENST00000553622 GTPBP10A4D1E9 387 aaKnown RBP10.53□□□□□ -0.72
CHD8-204ENST00000553622 CASTOR2A6NHX0 329 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 TBKBP1A7MCY6 615 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 PTGESO14684 152 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 P4HA2O15460 535 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 HOXA2O43364 376 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 EFCAB14O75071 495 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 OFD1O75665 1012 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 CAPN15O75808 1086 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 BAIAP3O94812 1187 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 PTMAP06454 111 aaKnown RBP10.53□□□□□ -0.72
CHD8-204ENST00000553622 TPM1P09493 284 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 KCNE1P15382 129 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 TRIM21P19474 475 aaKnown RBP10.53□□□□□ -0.72
CHD8-204ENST00000553622 SLC9A1P19634 815 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 PON1P27169 355 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 POLR2BP30876 1174 aaKnown RBP10.53□□□□□ -0.72
CHD8-204ENST00000553622 AFF1P51825 1210 aaKnown RBP10.53□□□□□ -0.72
CHD8-204ENST00000553622 WDR5P61964 334 aaKnown RBP10.53□□□□□ -0.72
CHD8-204ENST00000553622 CLDN10P78369 228 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 FAM189BP81408 668 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 DEFB103AP81534 67 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 APBA1Q02410 837 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 KCNMA1Q12791 1236 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 ZACNQ401N2 412 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 PAN2Q504Q3 1202 aaKnown RBP10.53□□□□□ -0.72
CHD8-204ENST00000553622 NOMO2Q5JPE7 1267 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 CLLU1OSQ5K130 101 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 SPECC1LQ69YQ0 1117 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 PSRC1Q6PGN9 363 aaPredicted RBP10.53□□□□□ -0.72
CHD8-204ENST00000553622 ALKAL1Q6UXT8 129 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 FAM43BQ6ZT52 329 aaPredicted RBP10.53□□□□□ -0.72
CHD8-204ENST00000553622 TMCO2Q7Z6W1 182 aaPredicted RBP10.53□□□□□ -0.72
CHD8-204ENST00000553622 PPFIBP1Q86W92 1011 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 NT5DC4Q86YG4 428 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 C1orf127Q8N9H9 656 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 SEMA4DQ92854 862 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 VWCEQ96DN2 955 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 ERGIC2Q96RQ1 377 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 ELAC1Q9H777 363 aaKnown RBP10.53□□□□□ -0.72
CHD8-204ENST00000553622 GOLGA2P5Q9HBQ8 144 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 RAB20Q9NX57 234 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 MIOSQ9NXC5 875 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 CACNG4Q9UBN1 327 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 PLAGL2Q9UPG8 496 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 AGAP1Q9UPQ3 857 aa10.53□□□□□ -0.72
CHD8-204ENST00000553622 A0A1W2PQC6 194 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 LRRN2O75325 713 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 VNN1O95497 513 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 CDC25BP30305 580 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 EPHB4P54760 987 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 MYL6P60660 151 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 RBP5P82980 135 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 SOX4Q06945 474 aaPredicted RBP10.52□□□□□ -0.73
CHD8-204ENST00000553622 GRIK3Q13003 919 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 ZNF699Q32M78 642 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 EPC2Q52LR7 807 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 XKR4Q5GH76 650 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 SPOPLQ6IQ16 392 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 TRIM65Q6PJ69 517 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 C15orf39Q6ZRI6 1047 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 C16orf59Q7L2K0 433 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 CACNA2D4Q7Z3S7 1137 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.52□□□□□ -0.73
CHD8-204ENST00000553622 EHBP1Q8NDI1 1231 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 RABGGTAQ92696 567 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 NT5C1BQ96P26 610 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 PPP1R10Q96QC0 940 aaKnown RBP10.52□□□□□ -0.73
CHD8-204ENST00000553622 TSPAN18Q96SJ8 248 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.52□□□□□ -0.73
CHD8-204ENST00000553622 ITGA11Q9UKX5 1188 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 SIK3Q9Y2K2 1263 aa10.52□□□□□ -0.73
CHD8-204ENST00000553622 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.52□□□□□ -0.73
CHD8-204ENST00000553622 MKI67P46013 3256 aaKnown RBP10.52□□□□□ -0.73
CHD8-204ENST00000553622 CST3P01034 146 aaPredicted RBP10.51□□□□□ -0.73
CHD8-204ENST00000553622 PBX1P40424 430 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 POLR2FP61218 127 aaKnown RBP10.51□□□□□ -0.73
CHD8-204ENST00000553622 NOP14P78316 857 aaKnown RBP10.51□□□□□ -0.73
CHD8-204ENST00000553622 GOLGA8FQ08AF8 430 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 GOLGA8DPQ0D2H9 430 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 MYO1EQ12965 1108 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 RAPGEF1Q13905 1077 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 ARHGAP44Q17R89 818 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 SGSM1Q2NKQ1 1148 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 TMEM240Q5SV17 173 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 SPOUT1Q5T280 376 aaKnown RBP10.51□□□□□ -0.73
CHD8-204ENST00000553622 C9orf57Q5W0N0 161 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 SCARA3Q6AZY7 606 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 GJB7Q6PEY0 223 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 SCARA5Q6ZMJ2 495 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 RRAGAQ7L523 313 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 GPIHBP1Q8IV16 184 aa10.51□□□□□ -0.73
CHD8-204ENST00000553622 PPM1KQ8N3J5 372 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms