RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 ANKRD27Q96NW4 1050 aa18.66■□□□□ 0.58
SYNE3-202ENST00000553340 HEMGNQ9BXL5 484 aa18.66■□□□□ 0.58
SYNE3-202ENST00000553340 TMX4Q9H1E5 349 aaPredicted RBP18.66■□□□□ 0.58
SYNE3-202ENST00000553340 MYLK2Q9H1R3 596 aa18.66■□□□□ 0.58
SYNE3-202ENST00000553340 TOM1O60784 492 aa18.65■□□□□ 0.58
SYNE3-202ENST00000553340 ABHD2P08910 425 aa18.65■□□□□ 0.58
SYNE3-202ENST00000553340 KLF1Q13351 362 aaPredicted RBP18.65■□□□□ 0.58
SYNE3-202ENST00000553340 TAS1R2Q8TE23 839 aa18.65■□□□□ 0.58
SYNE3-202ENST00000553340 MAML1Q92585 1016 aa18.65■□□□□ 0.58
SYNE3-202ENST00000553340 SAAL1Q96ER3 474 aa18.65■□□□□ 0.58
SYNE3-202ENST00000553340 TRIM11Q96F44 468 aa18.65■□□□□ 0.58
SYNE3-202ENST00000553340 FOXP3Q9BZS1 431 aa18.65■□□□□ 0.58
SYNE3-202ENST00000553340 LRMDAQ9H2I8 198 aa18.65■□□□□ 0.58
SYNE3-202ENST00000553340 RANBP17Q9H2T7 1088 aaKnown RBP18.65■□□□□ 0.58
SYNE3-202ENST00000553340 EXOC7Q9UPT5 735 aa18.65■□□□□ 0.58
SYNE3-202ENST00000553340 USH1CQ9Y6N9 552 aa18.65■□□□□ 0.58
SYNE3-202ENST00000553340 MAGEB2O15479 319 aa18.65■□□□□ 0.58
SYNE3-202ENST00000553340 MYBL1P10243 752 aa18.65■□□□□ 0.58
SYNE3-202ENST00000553340 UNGP13051 313 aaPredicted RBP18.65■□□□□ 0.58
SYNE3-202ENST00000553340 ITGB5P18084 799 aa18.65■□□□□ 0.58
SYNE3-202ENST00000553340 MAGEA4P43358 317 aa18.65■□□□□ 0.58
SYNE3-202ENST00000553340 YARSP54577 528 aaKnown RBP18.65■□□□□ 0.58
SYNE3-202ENST00000553340 PTP4A2Q12974 167 aa18.65■□□□□ 0.58
SYNE3-202ENST00000553340 CHURC1Q8WUH1 139 aa18.65■□□□□ 0.58
SYNE3-202ENST00000553340 ERP27Q96DN0 273 aa18.65■□□□□ 0.58
SYNE3-202ENST00000553340 SPDL1Q96EA4 605 aa18.65■□□□□ 0.58
SYNE3-202ENST00000553340 LRRC37BQ96QE4 947 aa18.65■□□□□ 0.58
SYNE3-202ENST00000553340 RBM15Q96T37 977 aaKnown RBP eCLIP18.65■□□□□ 0.58
SYNE3-202ENST00000553340 UBN1Q9NPG3 1134 aa18.65■□□□□ 0.58
SYNE3-202ENST00000553340 ZNF536O15090 1300 aa18.64■□□□□ 0.58
SYNE3-202ENST00000553340 CCDC189A1A4V9 331 aa18.64■□□□□ 0.57
SYNE3-202ENST00000553340 LUC7L3O95232 432 aaKnown RBP18.64■□□□□ 0.57
SYNE3-202ENST00000553340 ASMTLO95671 621 aa18.64■□□□□ 0.57
SYNE3-202ENST00000553340 QARSP47897 775 aaKnown RBP18.64■□□□□ 0.57
SYNE3-202ENST00000553340 CYP4F22Q6NT55 531 aa18.64■□□□□ 0.57
SYNE3-202ENST00000553340 AGGF1Q8N302 714 aaeCLIP18.64■□□□□ 0.57
SYNE3-202ENST00000553340 UTP4Q969X6 686 aaKnown RBP18.64■□□□□ 0.57
SYNE3-202ENST00000553340 CFAP57Q96MR6 1250 aa18.64■□□□□ 0.57
SYNE3-202ENST00000553340 KCNH7Q9NS40 1196 aa18.64■□□□□ 0.57
SYNE3-202ENST00000553340 PHTF1Q9UMS5 762 aa18.64■□□□□ 0.57
SYNE3-202ENST00000553340 ATRNL1Q5VV63 1379 aa18.64■□□□□ 0.57
SYNE3-202ENST00000553340 EXOC1LA0A1B0GW35 172 aa18.64■□□□□ 0.57
SYNE3-202ENST00000553340 SKAP2O75563 359 aaPredicted RBP18.64■□□□□ 0.57
SYNE3-202ENST00000553340 ADSSP30520 456 aa18.64■□□□□ 0.57
SYNE3-202ENST00000553340 NCKAP1LP55160 1127 aa18.64■□□□□ 0.57
SYNE3-202ENST00000553340 DNAJC3Q13217 504 aa18.64■□□□□ 0.57
SYNE3-202ENST00000553340 TBC1D10BQ4KMP7 808 aaPredicted RBP18.64■□□□□ 0.57
SYNE3-202ENST00000553340 TRABD2AQ86V40 505 aa18.64■□□□□ 0.57
SYNE3-202ENST00000553340 SLC17A8Q8NDX2 589 aa18.64■□□□□ 0.57
SYNE3-202ENST00000553340 TIPINQ9BVW5 301 aa18.64■□□□□ 0.57
SYNE3-202ENST00000553340 ZBTB21Q9ULJ3 1066 aa18.64■□□□□ 0.57
SYNE3-202ENST00000553340 UBR3Q6ZT12 1888 aa18.63■□□□□ 0.57
SYNE3-202ENST00000553340 LIN7AO14910 233 aaPredicted RBP18.63■□□□□ 0.57
SYNE3-202ENST00000553340 ALDH3A1P30838 453 aa18.63■□□□□ 0.57
SYNE3-202ENST00000553340 SPARCL1Q14515 664 aa18.63■□□□□ 0.57
SYNE3-202ENST00000553340 STRIP1Q5VSL9 837 aa18.63■□□□□ 0.57
SYNE3-202ENST00000553340 ENOSF1Q7L5Y1 443 aa18.63■□□□□ 0.57
SYNE3-202ENST00000553340 GSTA5Q7RTV2 222 aa18.63■□□□□ 0.57
SYNE3-202ENST00000553340 USP37Q86T82 979 aa18.63■□□□□ 0.57
SYNE3-202ENST00000553340 ZCCHC9Q8N567 271 aaKnown RBP18.63■□□□□ 0.57
SYNE3-202ENST00000553340 MICAL1Q8TDZ2 1067 aa18.63■□□□□ 0.57
SYNE3-202ENST00000553340 CSRNP1Q96S65 589 aa18.63■□□□□ 0.57
SYNE3-202ENST00000553340 SH2D3AQ9BRG2 576 aa18.63■□□□□ 0.57
SYNE3-202ENST00000553340 TAF11Q15544 211 aa18.63■□□□□ 0.57
SYNE3-202ENST00000553340 PHLDB2Q86SQ0 1253 aa18.63■□□□□ 0.57
SYNE3-202ENST00000553340 TMC2Q8TDI7 906 aa18.63■□□□□ 0.57
SYNE3-202ENST00000553340 ACER1Q8TDN7 264 aa18.63■□□□□ 0.57
SYNE3-202ENST00000553340 FAM118BQ9BPY3 351 aa18.63■□□□□ 0.57
SYNE3-202ENST00000553340 GPRC5CQ9NQ84 441 aa18.63■□□□□ 0.57
SYNE3-202ENST00000553340 TOPORSQ9NS56 1045 aaPredicted RBP18.63■□□□□ 0.57
SYNE3-202ENST00000553340 TMX2Q9Y320 296 aa18.63■□□□□ 0.57
SYNE3-202ENST00000553340 PSTPIP1O43586 416 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 ENTPD3O75355 529 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 SPAG7O75391 227 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 DCTN3O75935 186 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 SMNDC1O75940 238 aaKnown RBP eCLIP18.62■□□□□ 0.57
SYNE3-202ENST00000553340 PROSCO94903 275 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 CNGA1P29973 690 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 YWHABP31946 246 aaKnown RBP18.62■□□□□ 0.57
SYNE3-202ENST00000553340 P3H1Q32P28 736 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 CAPRIN2Q6IMN6 1127 aaKnown RBP18.62■□□□□ 0.57
SYNE3-202ENST00000553340 PRUNE1Q86TP1 453 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 RHOT1Q8IXI2 618 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 CPA5Q8WXQ8 436 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 INPP5DQ92835 1189 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 OSBPL8Q9BZF1 889 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 TDRD3Q9H7E2 651 aaKnown RBP18.62■□□□□ 0.57
SYNE3-202ENST00000553340 SERPINA10Q9UK55 444 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 TBX20Q9UMR3 447 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 CHKBQ9Y259 395 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 NRXN2Q9P2S2 1712 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 PRPF4O43172 522 aaKnown RBP eCLIP18.62■□□□□ 0.57
SYNE3-202ENST00000553340 CALCAP01258 141 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 NPR1P16066 1061 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 GTF2H1P32780 548 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 NSFP46459 744 aaKnown RBP18.62■□□□□ 0.57
SYNE3-202ENST00000553340 SLC18A1P54219 525 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 FKBP1AP62942 108 aaKnown RBP18.62■□□□□ 0.57
SYNE3-202ENST00000553340 GCNT1Q02742 428 aa18.62■□□□□ 0.57
SYNE3-202ENST00000553340 SAMD1Q6SPF0 538 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms