RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 CASP1P29466 404 aa21■□□□□ 0.95
PTCH1-227ENST00000553256 AARSP49588 968 aaKnown RBP eCLIP21■□□□□ 0.95
PTCH1-227ENST00000553256 WNT7BP56706 349 aa21■□□□□ 0.95
PTCH1-227ENST00000553256 SPAG1Q07617 926 aa21■□□□□ 0.95
PTCH1-227ENST00000553256 ALCAMQ13740 583 aa21■□□□□ 0.95
PTCH1-227ENST00000553256 MRPL58Q14197 206 aaKnown RBP21■□□□□ 0.95
PTCH1-227ENST00000553256 TPRNQ4KMQ1 711 aa21■□□□□ 0.95
PTCH1-227ENST00000553256 SLFN12LQ6IEE8 588 aa21■□□□□ 0.95
PTCH1-227ENST00000553256 HDAC7Q8WUI4 952 aa21■□□□□ 0.95
PTCH1-227ENST00000553256 TSPAN18Q96SJ8 248 aa21■□□□□ 0.95
PTCH1-227ENST00000553256 MSTO1Q9BUK6 570 aa21■□□□□ 0.95
PTCH1-227ENST00000553256 APOL5Q9BWW9 433 aa21■□□□□ 0.95
PTCH1-227ENST00000553256 I3L4J1 428 aa20.99■□□□□ 0.95
PTCH1-227ENST00000553256 KLRC4O43908 158 aa20.99■□□□□ 0.95
PTCH1-227ENST00000553256 CA8P35219 290 aa20.99■□□□□ 0.95
PTCH1-227ENST00000553256 KRT85P78386 507 aa20.99■□□□□ 0.95
PTCH1-227ENST00000553256 KIAA1841Q6NSI8 718 aa20.99■□□□□ 0.95
PTCH1-227ENST00000553256 GPR149Q86SP6 731 aa20.99■□□□□ 0.95
PTCH1-227ENST00000553256 ZNF707Q96C28 371 aaPredicted RBP20.99■□□□□ 0.95
PTCH1-227ENST00000553256 ACCSQ96QU6 501 aa20.99■□□□□ 0.95
PTCH1-227ENST00000553256 LRRC27Q9C0I9 530 aa20.99■□□□□ 0.95
PTCH1-227ENST00000553256 POMKQ9H5K3 350 aa20.99■□□□□ 0.95
PTCH1-227ENST00000553256 EPHX3Q9H6B9 360 aa20.99■□□□□ 0.95
PTCH1-227ENST00000553256 C11orf16Q9NQ32 467 aa20.99■□□□□ 0.95
PTCH1-227ENST00000553256 MTRRQ9UBK8 725 aa20.99■□□□□ 0.95
PTCH1-227ENST00000553256 AGO2Q9UKV8 859 aaKnown RBP20.99■□□□□ 0.95
PTCH1-227ENST00000553256 PCDHB13Q9Y5F0 798 aa20.99■□□□□ 0.95
PTCH1-227ENST00000553256 ANK1P16157 1881 aa20.98■□□□□ 0.95
PTCH1-227ENST00000553256 PRPF6O94906 941 aaKnown RBP20.98■□□□□ 0.95
PTCH1-227ENST00000553256 GCNT3O95395 438 aa20.98■□□□□ 0.95
PTCH1-227ENST00000553256 SLFN14P0C7P3 912 aa20.98■□□□□ 0.95
PTCH1-227ENST00000553256 PFKFB1P16118 471 aa20.98■□□□□ 0.95
PTCH1-227ENST00000553256 TKTP29401 623 aaKnown RBP20.98■□□□□ 0.95
PTCH1-227ENST00000553256 ACOT2P49753 483 aa20.98■□□□□ 0.95
PTCH1-227ENST00000553256 CUL4BQ13620 913 aa20.98■□□□□ 0.95
PTCH1-227ENST00000553256 RARS2Q5T160 578 aaKnown RBP20.98■□□□□ 0.95
PTCH1-227ENST00000553256 SPATA1Q5VX52 437 aa20.98■□□□□ 0.95
PTCH1-227ENST00000553256 UNC13DQ70J99 1090 aa20.98■□□□□ 0.95
PTCH1-227ENST00000553256 CD302Q8IX05 232 aa20.98■□□□□ 0.95
PTCH1-227ENST00000553256 CCDC65Q8IXS2 484 aa20.98■□□□□ 0.95
PTCH1-227ENST00000553256 ZNF507Q8TCN5 953 aa20.98■□□□□ 0.95
PTCH1-227ENST00000553256 SUSD3Q96L08 255 aa20.98■□□□□ 0.95
PTCH1-227ENST00000553256 SFXN1Q9H9B4 322 aa20.98■□□□□ 0.95
PTCH1-227ENST00000553256 MAN1C1Q9NR34 630 aa20.98■□□□□ 0.95
PTCH1-227ENST00000553256 FAM13BQ9NYF5 915 aa20.98■□□□□ 0.95
PTCH1-227ENST00000553256 SERTAD1Q9UHV2 236 aa20.98■□□□□ 0.95
PTCH1-227ENST00000553256 BACE2Q9Y5Z0 518 aa20.98■□□□□ 0.95
PTCH1-227ENST00000553256 TCHHQ07283 1943 aa20.98■□□□□ 0.95
PTCH1-227ENST00000553256 DENND4AQ7Z401 1863 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 A0A1B0GVL5 298 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 PPEF2O14830 753 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 GLUD1P00367 558 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 NFICP08651 508 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 WEE2P0C1S8 567 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 GARTP22102 1010 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 GUCY2FP51841 1108 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 AMPD3Q01432 767 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 CREMQ03060 361 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 RAB33AQ14088 237 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 BECN1Q14457 450 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 PSMD5Q16401 504 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 C15orf39Q6ZRI6 1047 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 GRAMD1CQ8IYS0 662 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 SPATA32Q96LK8 384 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 POP1Q99575 1024 aaKnown RBP20.97■□□□□ 0.95
PTCH1-227ENST00000553256 CBWD1Q9BRT8 395 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 BLZF1Q9H2G9 400 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 ASB7Q9H672 318 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 RPF1Q9H9Y2 349 aaKnown RBP20.97■□□□□ 0.95
PTCH1-227ENST00000553256 FBXW11Q9UKB1 542 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 UBQLN1Q9UMX0 589 aaKnown RBP20.97■□□□□ 0.95
PTCH1-227ENST00000553256 DERAQ9Y315 318 aa20.97■□□□□ 0.95
PTCH1-227ENST00000553256 PVALEFA0A1B0GWK0 134 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 A0A1W2PQ27 194 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 A0A1W2PQ64 194 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 A0A1W2PQD8 194 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 ANO9A1A5B4 782 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 M0QZQ0 153 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 SYN3O14994 580 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 EIF3DO15371 548 aaKnown RBP eCLIP20.96■□□□□ 0.95
PTCH1-227ENST00000553256 TGFB1I1O43294 461 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 MATR3P43243 847 aaKnown RBP eCLIP20.96■□□□□ 0.95
PTCH1-227ENST00000553256 PPP2R3AQ06190 1150 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 POSTNQ15063 836 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 JADE1Q6IE81 842 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 TMC5Q6UXY8 1006 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 PALB2Q86YC2 1186 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 EFCAB13Q8IY85 973 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 CXorf38Q8TB03 319 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 SCFD1Q8WVM8 642 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 KIF12Q96FN5 646 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 PAGE5Q96GU1 130 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 NECTIN4Q96NY8 510 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 SCAND2PQ9GZW5 306 aaPredicted RBP20.96■□□□□ 0.95
PTCH1-227ENST00000553256 PLEKHA4Q9H4M7 779 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 EXOC7Q9UPT5 735 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 C2CD2Q9Y426 696 aa20.96■□□□□ 0.95
PTCH1-227ENST00000553256 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.96■□□□□ 0.95
PTCH1-227ENST00000553256 PIRO00625 290 aa20.95■□□□□ 0.94
PTCH1-227ENST00000553256 RFPL2O75678 378 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms