RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 SERTAD1Q9UHV2 236 aa20.45■□□□□ 0.86
HDAC4-217ENST00000553145 AGO2Q9UKV8 859 aaKnown RBP20.45■□□□□ 0.86
HDAC4-217ENST00000553145 MUC3AQ02505 3323 aa20.45■□□□□ 0.86
HDAC4-217ENST00000553145 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.44■□□□□ 0.86
HDAC4-217ENST00000553145 A0A1B0GVL5 298 aa20.44■□□□□ 0.86
HDAC4-217ENST00000553145 PRPF6O94906 941 aaKnown RBP20.44■□□□□ 0.86
HDAC4-217ENST00000553145 GLUD1P00367 558 aa20.44■□□□□ 0.86
HDAC4-217ENST00000553145 TKTP29401 623 aaKnown RBP20.44■□□□□ 0.86
HDAC4-217ENST00000553145 AFMP43652 599 aa20.44■□□□□ 0.86
HDAC4-217ENST00000553145 GUCY2FP51841 1108 aa20.44■□□□□ 0.86
HDAC4-217ENST00000553145 ALCAMQ13740 583 aa20.44■□□□□ 0.86
HDAC4-217ENST00000553145 PSMD5Q16401 504 aa20.44■□□□□ 0.86
HDAC4-217ENST00000553145 SLFN12LQ6IEE8 588 aa20.44■□□□□ 0.86
HDAC4-217ENST00000553145 CRELD2Q6UXH1 353 aaPredicted RBP20.44■□□□□ 0.86
HDAC4-217ENST00000553145 PALB2Q86YC2 1186 aa20.44■□□□□ 0.86
HDAC4-217ENST00000553145 CLSTN3Q9BQT9 956 aa20.44■□□□□ 0.86
HDAC4-217ENST00000553145 PHF7Q9BWX1 381 aaPredicted RBP20.44■□□□□ 0.86
HDAC4-217ENST00000553145 MAN1C1Q9NR34 630 aa20.44■□□□□ 0.86
HDAC4-217ENST00000553145 EXOC7Q9UPT5 735 aa20.44■□□□□ 0.86
HDAC4-217ENST00000553145 HPSEQ9Y251 543 aa20.44■□□□□ 0.86
HDAC4-217ENST00000553145 PCDHB13Q9Y5F0 798 aa20.44■□□□□ 0.86
HDAC4-217ENST00000553145 ATP6V1DQ9Y5K8 247 aa20.44■□□□□ 0.86
HDAC4-217ENST00000553145 TCHHQ07283 1943 aa20.44■□□□□ 0.86
HDAC4-217ENST00000553145 NCOR1O75376 2440 aa20.44■□□□□ 0.86
HDAC4-217ENST00000553145 ADAM12O43184 909 aa20.43■□□□□ 0.86
HDAC4-217ENST00000553145 ACTN4O43707 911 aaKnown RBP20.43■□□□□ 0.86
HDAC4-217ENST00000553145 SPATA31D3P0C874 917 aa20.43■□□□□ 0.86
HDAC4-217ENST00000553145 CMA1P23946 247 aa20.43■□□□□ 0.86
HDAC4-217ENST00000553145 RPL9P32969 192 aaKnown RBP20.43■□□□□ 0.86
HDAC4-217ENST00000553145 ITIH3Q06033 890 aa20.43■□□□□ 0.86
HDAC4-217ENST00000553145 CUL4BQ13620 913 aa20.43■□□□□ 0.86
HDAC4-217ENST00000553145 JADE1Q6IE81 842 aa20.43■□□□□ 0.86
HDAC4-217ENST00000553145 TMC5Q6UXY8 1006 aa20.43■□□□□ 0.86
HDAC4-217ENST00000553145 SPATA31D4Q6ZUB0 917 aa20.43■□□□□ 0.86
HDAC4-217ENST00000553145 ZSWIM2Q8NEG5 633 aa20.43■□□□□ 0.86
HDAC4-217ENST00000553145 POMGNT1Q8WZA1 660 aa20.43■□□□□ 0.86
HDAC4-217ENST00000553145 FAM212AQ96EL1 285 aa20.43■□□□□ 0.86
HDAC4-217ENST00000553145 POP1Q99575 1024 aaKnown RBP20.43■□□□□ 0.86
HDAC4-217ENST00000553145 POMKQ9H5K3 350 aa20.43■□□□□ 0.86
HDAC4-217ENST00000553145 SFXN1Q9H9B4 322 aa20.43■□□□□ 0.86
HDAC4-217ENST00000553145 GDPD2Q9HCC8 539 aa20.43■□□□□ 0.86
HDAC4-217ENST00000553145 BDP1A6H8Y1 2624 aa20.43■□□□□ 0.86
HDAC4-217ENST00000553145 ANK1P16157 1881 aa20.43■□□□□ 0.86
HDAC4-217ENST00000553145 C5orf42Q9H799 3197 aa20.42■□□□□ 0.86
HDAC4-217ENST00000553145 LOC730098B7Z3J9 87 aa20.42■□□□□ 0.86
HDAC4-217ENST00000553145 TGM5O43548 720 aa20.42■□□□□ 0.86
HDAC4-217ENST00000553145 NFICP08651 508 aa20.42■□□□□ 0.86
HDAC4-217ENST00000553145 LRPAP1P30533 357 aa20.42■□□□□ 0.86
HDAC4-217ENST00000553145 CREMQ03060 361 aa20.42■□□□□ 0.86
HDAC4-217ENST00000553145 EHHADHQ08426 723 aa20.42■□□□□ 0.86
HDAC4-217ENST00000553145 CES5AQ6NT32 575 aa20.42■□□□□ 0.86
HDAC4-217ENST00000553145 LILRA6Q6PI73 481 aa20.42■□□□□ 0.86
HDAC4-217ENST00000553145 RSPO2Q6UXX9 243 aaPredicted RBP20.42■□□□□ 0.86
HDAC4-217ENST00000553145 UNC13DQ70J99 1090 aa20.42■□□□□ 0.86
HDAC4-217ENST00000553145 UBQLN1Q9UMX0 589 aaKnown RBP20.42■□□□□ 0.86
HDAC4-217ENST00000553145 PPEF2O14830 753 aa20.41■□□□□ 0.86
HDAC4-217ENST00000553145 TRAPPC3O43617 180 aa20.41■□□□□ 0.86
HDAC4-217ENST00000553145 SLFN14P0C7P3 912 aa20.41■□□□□ 0.86
HDAC4-217ENST00000553145 CYP3A5P20815 502 aa20.41■□□□□ 0.86
HDAC4-217ENST00000553145 HOXD13P35453 343 aa20.41■□□□□ 0.86
HDAC4-217ENST00000553145 WNT7BP56706 349 aa20.41■□□□□ 0.86
HDAC4-217ENST00000553145 POSTNQ15063 836 aa20.41■□□□□ 0.86
HDAC4-217ENST00000553145 FAM26FQ5R3K3 315 aa20.41■□□□□ 0.86
HDAC4-217ENST00000553145 EPM2AIP1Q7L775 607 aaPredicted RBP20.41■□□□□ 0.86
HDAC4-217ENST00000553145 CEP57L1Q8IYX8 460 aa20.41■□□□□ 0.86
HDAC4-217ENST00000553145 SYCP3Q8IZU3 236 aa20.41■□□□□ 0.86
HDAC4-217ENST00000553145 SAAL1Q96ER3 474 aa20.41■□□□□ 0.86
HDAC4-217ENST00000553145 RPGRIP1Q96KN7 1286 aa20.41■□□□□ 0.86
HDAC4-217ENST00000553145 PYM1Q9BRP8 204 aaKnown RBP20.41■□□□□ 0.86
HDAC4-217ENST00000553145 CBWD1Q9BRT8 395 aa20.41■□□□□ 0.86
HDAC4-217ENST00000553145 SCAND2PQ9GZW5 306 aaPredicted RBP20.41■□□□□ 0.86
HDAC4-217ENST00000553145 EPHX3Q9H6B9 360 aa20.41■□□□□ 0.86
HDAC4-217ENST00000553145 MTRRQ9UBK8 725 aa20.41■□□□□ 0.86
HDAC4-217ENST00000553145 NUB1Q9Y5A7 615 aa20.41■□□□□ 0.86
HDAC4-217ENST00000553145 FAM237AA0A1B0GTK4 181 aa20.4■□□□□ 0.86
HDAC4-217ENST00000553145 SPDYE4A6NLX3 237 aa20.4■□□□□ 0.86
HDAC4-217ENST00000553145 SP100P23497 879 aaPredicted RBP20.4■□□□□ 0.86
HDAC4-217ENST00000553145 MCM4P33991 863 aa20.4■□□□□ 0.86
HDAC4-217ENST00000553145 SPATA1Q5VX52 437 aa20.4■□□□□ 0.86
HDAC4-217ENST00000553145 GPR149Q86SP6 731 aa20.4■□□□□ 0.86
HDAC4-217ENST00000553145 CD302Q8IX05 232 aa20.4■□□□□ 0.86
HDAC4-217ENST00000553145 PAGE5Q96GU1 130 aa20.4■□□□□ 0.86
HDAC4-217ENST00000553145 SUSD3Q96L08 255 aa20.4■□□□□ 0.86
HDAC4-217ENST00000553145 FAM213AQ9BRX8 229 aa20.4■□□□□ 0.86
HDAC4-217ENST00000553145 GOLPH3LQ9H4A5 285 aa20.4■□□□□ 0.86
HDAC4-217ENST00000553145 TMEM206Q9H813 350 aa20.4■□□□□ 0.86
HDAC4-217ENST00000553145 C2orf16Q68DN1 1984 aa20.39■□□□□ 0.86
HDAC4-217ENST00000553145 DENND4AQ7Z401 1863 aa20.39■□□□□ 0.86
HDAC4-217ENST00000553145 KLRC4O43908 158 aa20.39■□□□□ 0.85
HDAC4-217ENST00000553145 RFPL2O75678 378 aa20.39■□□□□ 0.85
HDAC4-217ENST00000553145 C1RP00736 705 aa20.39■□□□□ 0.85
HDAC4-217ENST00000553145 GARTP22102 1010 aa20.39■□□□□ 0.85
HDAC4-217ENST00000553145 MTHFRP42898 656 aa20.39■□□□□ 0.85
HDAC4-217ENST00000553145 NDUFA8P51970 172 aa20.39■□□□□ 0.85
HDAC4-217ENST00000553145 PDXDC1Q6P996 788 aa20.39■□□□□ 0.85
HDAC4-217ENST00000553145 EFCAB13Q8IY85 973 aa20.39■□□□□ 0.85
HDAC4-217ENST00000553145 RIPOR3Q96MK2 946 aa20.39■□□□□ 0.85
HDAC4-217ENST00000553145 NECTIN4Q96NY8 510 aa20.39■□□□□ 0.85
HDAC4-217ENST00000553145 TSPAN18Q96SJ8 248 aa20.39■□□□□ 0.85
HDAC4-217ENST00000553145 PCIF1Q9H4Z3 704 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms