RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 PNPLA4P41247 253 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 MFAP3P55082 362 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 WNT7BP56706 349 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 GCNT1Q02742 428 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 MYO1EQ12965 1108 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 ARID5BQ14865 1188 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 GLB1LQ6UWU2 654 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 CCDC186Q7Z3E2 898 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 ZNF598Q86UK7 904 aaKnown RBP11.21□□□□□ -0.61
NEK3-203ENST00000551355 EFCAB13Q8IY85 973 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 LRRC52Q8N7C0 313 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 CCDC112Q8NEF3 446 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 OR5B17Q8NGF7 314 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 OR8K1Q8NGG5 319 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 TAS1R2Q8TE23 839 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 TRIM44Q96DX7 344 aaPredicted RBP11.21□□□□□ -0.61
NEK3-203ENST00000551355 SCLYQ96I15 445 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 NAA15Q9BXJ9 866 aaKnown RBP11.21□□□□□ -0.61
NEK3-203ENST00000551355 STK33Q9BYT3 514 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 OSBPL7Q9BZF2 842 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 VRTNQ9H8Y1 702 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 PRDM5Q9NQX1 630 aaPredicted RBP11.21□□□□□ -0.61
NEK3-203ENST00000551355 DPP3Q9NY33 737 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 PCDHB7Q9Y5E2 793 aa11.21□□□□□ -0.61
NEK3-203ENST00000551355 TRIP12Q14669 1992 aaPredicted RBP11.21□□□□□ -0.62
NEK3-203ENST00000551355 PTPRJQ12913 1337 aa11.2□□□□□ -0.62
NEK3-203ENST00000551355 TRIM43BA6NCK2 446 aa11.2□□□□□ -0.62
NEK3-203ENST00000551355 ARL5CA6NH57 179 aa11.2□□□□□ -0.62
NEK3-203ENST00000551355 MEFVO15553 781 aaPredicted RBP11.2□□□□□ -0.62
NEK3-203ENST00000551355 MFAP3LO75121 409 aa11.2□□□□□ -0.62
NEK3-203ENST00000551355 BAIAP3O94812 1187 aa11.2□□□□□ -0.62
NEK3-203ENST00000551355 NOL4O94818 638 aa11.2□□□□□ -0.62
NEK3-203ENST00000551355 ASS1P00966 412 aaKnown RBP11.2□□□□□ -0.62
NEK3-203ENST00000551355 RPL9P32969 192 aaKnown RBP11.2□□□□□ -0.62
NEK3-203ENST00000551355 KRT9P35527 623 aa11.2□□□□□ -0.62
NEK3-203ENST00000551355 POLR2FP61218 127 aaKnown RBP11.2□□□□□ -0.62
NEK3-203ENST00000551355 YWHAEP62258 255 aaKnown RBP11.2□□□□□ -0.62
NEK3-203ENST00000551355 GRIK3Q13003 919 aa11.2□□□□□ -0.62
NEK3-203ENST00000551355 PPIGQ13427 754 aaKnown RBP eCLIP11.2□□□□□ -0.622e-7■■■■□ 19.4
NEK3-203ENST00000551355 LMBRD2Q68DH5 695 aaPredicted RBP11.2□□□□□ -0.62
NEK3-203ENST00000551355 AGMOQ6ZNB7 445 aa11.2□□□□□ -0.62
NEK3-203ENST00000551355 RTN4RL1Q86UN2 441 aaPredicted RBP11.2□□□□□ -0.62
NEK3-203ENST00000551355 NPAS4Q8IUM7 802 aa11.2□□□□□ -0.62
NEK3-203ENST00000551355 TTC39CQ8N584 583 aa11.2□□□□□ -0.62
NEK3-203ENST00000551355 C1orf127Q8N9H9 656 aa11.2□□□□□ -0.62
NEK3-203ENST00000551355 URGCPQ8TCY9 931 aa11.2□□□□□ -0.62
NEK3-203ENST00000551355 CPLX3Q8WVH0 158 aa11.2□□□□□ -0.62
NEK3-203ENST00000551355 TRIM43Q96BQ3 446 aaPredicted RBP11.2□□□□□ -0.62
NEK3-203ENST00000551355 DDX27Q96GQ7 796 aaKnown RBP11.2□□□□□ -0.62
NEK3-203ENST00000551355 UROC1Q96N76 676 aa11.2□□□□□ -0.62
NEK3-203ENST00000551355 SPAG5Q96R06 1193 aa11.2□□□□□ -0.62
NEK3-203ENST00000551355 DNAJC7Q99615 494 aa11.2□□□□□ -0.62
NEK3-203ENST00000551355 GANQ9H2C0 597 aa11.2□□□□□ -0.62
NEK3-203ENST00000551355 SIX2Q9NPC8 291 aa11.2□□□□□ -0.62
NEK3-203ENST00000551355 LRFN2Q9ULH4 789 aa11.2□□□□□ -0.62
NEK3-203ENST00000551355 CARNS1A5YM72 827 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 VNN1O95497 513 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 KRT19P08727 400 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 LRPAP1P30533 357 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 HNRNPH3P31942 346 aaKnown RBP11.19□□□□□ -0.62
NEK3-203ENST00000551355 MLH1P40692 756 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 STAT1P42224 750 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 KLK7P49862 253 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 FXR1P51114 621 aaKnown RBP eCLIP11.19□□□□□ -0.62
NEK3-203ENST00000551355 NOP14P78316 857 aaKnown RBP11.19□□□□□ -0.62
NEK3-203ENST00000551355 CDK17Q00537 523 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 ZNF699Q32M78 642 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 DPY19L2P1Q6NXN4 242 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 DEFB128Q7Z7B8 93 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 LRRC8AQ8IWT6 810 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 ABI1Q8IZP0 508 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 TC2NQ8N9U0 490 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 RNF169Q8NCN4 708 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 SEMA4DQ92854 862 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 ABHD8Q96I13 439 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 ZNF560Q96MR9 790 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 ZMAT2Q96NC0 199 aaKnown RBP11.19□□□□□ -0.62
NEK3-203ENST00000551355 PPP1R10Q96QC0 940 aaKnown RBP11.19□□□□□ -0.62
NEK3-203ENST00000551355 GAD1Q99259 594 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 DNAI2Q9GZS0 605 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 UBE2TQ9NPD8 197 aaPredicted RBP11.19□□□□□ -0.62
NEK3-203ENST00000551355 IL23AQ9NPF7 189 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 ABHD10Q9NUJ1 306 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 KLK14Q9P0G3 267 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 DNAJC12Q9UKB3 198 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 PLAGL2Q9UPG8 496 aa11.19□□□□□ -0.62
NEK3-203ENST00000551355 BZW2Q9Y6E2 419 aaKnown RBP11.19□□□□□ -0.62
NEK3-203ENST00000551355 ANO9A1A5B4 782 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 PTGESO14684 152 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 EVI5O60447 810 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 OFD1O75665 1012 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 CST3P01034 146 aaPredicted RBP11.18□□□□□ -0.62
NEK3-203ENST00000551355 AMHP03971 560 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 ITGB3P05106 788 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 FAM163BP0C2L3 166 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 ADKP55263 362 aaKnown RBP11.18□□□□□ -0.62
NEK3-203ENST00000551355 MYL6P60660 151 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 RAPGEF1Q13905 1077 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 PTPN21Q16825 1174 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 ZNF667Q5HYK9 610 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms