RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 KCNE1P15382 129 aa25.25■■□□□ 1.63
SMARCD1-209ENST00000550477 NBR1Q14596 966 aa25.25■■□□□ 1.63
SMARCD1-209ENST00000550477 VARS2Q5ST30 1063 aaKnown RBP25.25■■□□□ 1.63
SMARCD1-209ENST00000550477 ZBTB41Q5SVQ8 909 aa25.25■■□□□ 1.63
SMARCD1-209ENST00000550477 RINT1Q6NUQ1 792 aa25.25■■□□□ 1.63
SMARCD1-209ENST00000550477 CEP120Q8N960 986 aa25.25■■□□□ 1.63
SMARCD1-209ENST00000550477 MCRS1Q96EZ8 462 aa25.25■■□□□ 1.63
SMARCD1-209ENST00000550477 KXD1Q9BQD3 176 aa25.25■■□□□ 1.63
SMARCD1-209ENST00000550477 AVENQ9NQS1 362 aaPredicted RBP25.25■■□□□ 1.63
SMARCD1-209ENST00000550477 PCDHB6Q9Y5E3 794 aa25.25■■□□□ 1.63
SMARCD1-209ENST00000550477 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.25■■□□□ 1.63
SMARCD1-209ENST00000550477 CFAP54Q96N23 3096 aa25.24■■□□□ 1.63
SMARCD1-209ENST00000550477 ARHGEF37A1IGU5 675 aa25.24■■□□□ 1.63
SMARCD1-209ENST00000550477 FAM170BA6NMN3 283 aa25.24■■□□□ 1.63
SMARCD1-209ENST00000550477 I3L4J1 428 aa25.24■■□□□ 1.63
SMARCD1-209ENST00000550477 ABLIM3O94929 683 aa25.24■■□□□ 1.63
SMARCD1-209ENST00000550477 ATF2P15336 505 aa25.24■■□□□ 1.63
SMARCD1-209ENST00000550477 MARCKSP29966 332 aaPredicted RBP25.24■■□□□ 1.63
SMARCD1-209ENST00000550477 ARPP19P56211 112 aa25.24■■□□□ 1.63
SMARCD1-209ENST00000550477 ROR1Q01973 937 aa25.24■■□□□ 1.63
SMARCD1-209ENST00000550477 TPGS2Q68CL5 300 aa25.24■■□□□ 1.63
SMARCD1-209ENST00000550477 CD300LGQ6UXG3 332 aa25.24■■□□□ 1.63
SMARCD1-209ENST00000550477 C3orf58Q8NDZ4 430 aa25.24■■□□□ 1.63
SMARCD1-209ENST00000550477 APPL2Q8NEU8 664 aa25.24■■□□□ 1.63
SMARCD1-209ENST00000550477 ING5Q8WYH8 240 aa25.24■■□□□ 1.63
SMARCD1-209ENST00000550477 NTPCRQ9BSD7 190 aaKnown RBP25.24■■□□□ 1.63
SMARCD1-209ENST00000550477 CYP4F11Q9HBI6 524 aa25.24■■□□□ 1.63
SMARCD1-209ENST00000550477 SPATA6Q9NWH7 488 aaPredicted RBP25.24■■□□□ 1.63
SMARCD1-209ENST00000550477 MAFFQ9ULX9 164 aa25.24■■□□□ 1.63
SMARCD1-209ENST00000550477 MIA3Q5JRA6 1907 aa25.24■■□□□ 1.63
SMARCD1-209ENST00000550477 SEC24BO95487 1268 aa25.23■■□□□ 1.63
SMARCD1-209ENST00000550477 MCM4P33991 863 aa25.23■■□□□ 1.63
SMARCD1-209ENST00000550477 SOX4Q06945 474 aaPredicted RBP25.23■■□□□ 1.63
SMARCD1-209ENST00000550477 ZRSR1Q15695 479 aaKnown RBP25.23■■□□□ 1.63
SMARCD1-209ENST00000550477 CYP4A22Q5TCH4 519 aa25.23■■□□□ 1.63
SMARCD1-209ENST00000550477 IQCEQ6IPM2 695 aa25.23■■□□□ 1.63
SMARCD1-209ENST00000550477 C1orf186Q6ZWK4 172 aa25.23■■□□□ 1.63
SMARCD1-209ENST00000550477 TCEAL8Q8IYN2 117 aa25.23■■□□□ 1.63
SMARCD1-209ENST00000550477 DDX23Q9BUQ8 820 aaKnown RBP25.23■■□□□ 1.63
SMARCD1-209ENST00000550477 CNTN3Q9P232 1028 aa25.23■■□□□ 1.63
SMARCD1-209ENST00000550477 FBXO4Q9UKT5 387 aa25.23■■□□□ 1.63
SMARCD1-209ENST00000550477 CITO14578 2027 aa25.23■■□□□ 1.63
SMARCD1-209ENST00000550477 CACNA1IQ9P0X4 2223 aa25.22■■□□□ 1.63
SMARCD1-209ENST00000550477 H0YCG3 227 aa25.22■■□□□ 1.63
SMARCD1-209ENST00000550477 SLC16A4O15374 487 aa25.22■■□□□ 1.63
SMARCD1-209ENST00000550477 KINO60870 393 aaKnown RBP25.22■■□□□ 1.63
SMARCD1-209ENST00000550477 TOM1L1O75674 476 aa25.22■■□□□ 1.63
SMARCD1-209ENST00000550477 HARSP12081 509 aaKnown RBP25.22■■□□□ 1.63
SMARCD1-209ENST00000550477 GUCY2CP25092 1073 aa25.22■■□□□ 1.63
SMARCD1-209ENST00000550477 MATR3P43243 847 aaKnown RBP eCLIP25.22■■□□□ 1.63
SMARCD1-209ENST00000550477 ZNF528Q3MIS6 628 aa25.22■■□□□ 1.63
SMARCD1-209ENST00000550477 CTXN3Q4LDR2 81 aa25.22■■□□□ 1.63
SMARCD1-209ENST00000550477 RILPL1Q5EBL4 403 aa25.22■■□□□ 1.63
SMARCD1-209ENST00000550477 ZNF280DQ6N043 979 aa25.22■■□□□ 1.63
SMARCD1-209ENST00000550477 ZNF852Q6ZMS4 543 aa25.22■■□□□ 1.63
SMARCD1-209ENST00000550477 CDK5RAP3Q96JB5 506 aa25.22■■□□□ 1.63
SMARCD1-209ENST00000550477 ZNF512Q96ME7 567 aaPredicted RBP25.22■■□□□ 1.63
SMARCD1-209ENST00000550477 CORO1BQ9BR76 489 aa25.22■■□□□ 1.63
SMARCD1-209ENST00000550477 KCND2Q9NZV8 630 aa25.22■■□□□ 1.63
SMARCD1-209ENST00000550477 MYO15AQ9UKN7 3530 aa25.22■■□□□ 1.63
SMARCD1-209ENST00000550477 SPTBN4Q9H254 2564 aa25.21■■□□□ 1.63
SMARCD1-209ENST00000550477 WDR27A2RRH5 827 aa25.21■■□□□ 1.63
SMARCD1-209ENST00000550477 CLDN3O15551 220 aa25.21■■□□□ 1.63
SMARCD1-209ENST00000550477 MICAL2O94851 1124 aa25.21■■□□□ 1.63
SMARCD1-209ENST00000550477 PROZP22891 400 aa25.21■■□□□ 1.63
SMARCD1-209ENST00000550477 TOB1P50616 345 aaPredicted RBP25.21■■□□□ 1.63
SMARCD1-209ENST00000550477 MCTP1Q6DN14 999 aa25.21■■□□□ 1.63
SMARCD1-209ENST00000550477 PDZD4Q76G19 769 aaPredicted RBP25.21■■□□□ 1.63
SMARCD1-209ENST00000550477 DAW1Q8N136 415 aa25.21■■□□□ 1.63
SMARCD1-209ENST00000550477 SPIRE2Q8WWL2 714 aa25.21■■□□□ 1.63
SMARCD1-209ENST00000550477 RUBCNQ92622 972 aa25.21■■□□□ 1.63
SMARCD1-209ENST00000550477 ELSPBP1Q96BH3 223 aa25.21■■□□□ 1.63
SMARCD1-209ENST00000550477 RUSC1Q9BVN2 902 aa25.21■■□□□ 1.63
SMARCD1-209ENST00000550477 ZFP14Q9HCL3 533 aa25.21■■□□□ 1.63
SMARCD1-209ENST00000550477 LTB4R2Q9NPC1 389 aa25.21■■□□□ 1.63
SMARCD1-209ENST00000550477 ANKFY1Q9P2R3 1169 aa25.21■■□□□ 1.63
SMARCD1-209ENST00000550477 PLS3P13797 630 aa25.2■■□□□ 1.62
SMARCD1-209ENST00000550477 IGFBP6P24592 240 aaPredicted RBP25.2■■□□□ 1.62
SMARCD1-209ENST00000550477 NOLC1Q14978 699 aaKnown RBP eCLIP25.2■■□□□ 1.62
SMARCD1-209ENST00000550477 TPRG1Q6ZUI0 275 aa25.2■■□□□ 1.62
SMARCD1-209ENST00000550477 LEMD2Q8NC56 503 aa25.2■■□□□ 1.62
SMARCD1-209ENST00000550477 ATRIPQ8WXE1 791 aa25.2■■□□□ 1.62
SMARCD1-209ENST00000550477 SUSD3Q96L08 255 aa25.2■■□□□ 1.62
SMARCD1-209ENST00000550477 ZMAT2Q96NC0 199 aaKnown RBP25.2■■□□□ 1.62
SMARCD1-209ENST00000550477 OXCT2Q9BYC2 517 aaPredicted RBP25.2■■□□□ 1.62
SMARCD1-209ENST00000550477 PLEKHA5Q9HAU0 1116 aa25.2■■□□□ 1.62
SMARCD1-209ENST00000550477 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.2■■□□□ 1.62
SMARCD1-209ENST00000550477 LARSQ9P2J5 1176 aaKnown RBP25.2■■□□□ 1.62
SMARCD1-209ENST00000550477 FBXL5Q9UKA1 691 aa25.2■■□□□ 1.62
SMARCD1-209ENST00000550477 SFI1A8K8P3 1242 aa25.19■■□□□ 1.62
SMARCD1-209ENST00000550477 GLULP15104 373 aa25.19■■□□□ 1.62
SMARCD1-209ENST00000550477 CDC25AP30304 524 aa25.19■■□□□ 1.62
SMARCD1-209ENST00000550477 MRPL58Q14197 206 aaKnown RBP25.19■■□□□ 1.62
SMARCD1-209ENST00000550477 KYAT1Q16773 422 aa25.19■■□□□ 1.62
SMARCD1-209ENST00000550477 ZPBP2Q6X784 338 aa25.19■■□□□ 1.62
SMARCD1-209ENST00000550477 TAS1R3Q7RTX0 852 aa25.19■■□□□ 1.62
SMARCD1-209ENST00000550477 DNASE1L2Q92874 299 aa25.19■■□□□ 1.62
SMARCD1-209ENST00000550477 AFF4Q9UHB7 1163 aaKnown RBP25.19■■□□□ 1.62
SMARCD1-209ENST00000550477 INSL5Q9Y5Q6 135 aa25.19■■□□□ 1.62
SMARCD1-209ENST00000550477 EP300Q09472 2414 aaPredicted RBP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms