RNA–Protein interactions for RNA: ENST00000550190.1

CACNB3-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 424 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-215ENST00000550190 CACNG4Q9UBN1 327 aa9.73□□□□□ -0.85
CACNB3-215ENST00000550190 LIMA1Q9UHB6 759 aaKnown RBP9.73□□□□□ -0.85
CACNB3-215ENST00000550190 DERAQ9Y315 318 aa9.73□□□□□ -0.85
CACNB3-215ENST00000550190 INSL6Q9Y581 213 aa9.73□□□□□ -0.85
CACNB3-215ENST00000550190 ZC3H11AO75152 810 aaKnown RBP eCLIP9.72□□□□□ -0.85
CACNB3-215ENST00000550190 C4BPAP04003 597 aaKnown RBP9.72□□□□□ -0.85
CACNB3-215ENST00000550190 ITGB3P05106 788 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 POLR2BP30876 1174 aaKnown RBP9.72□□□□□ -0.85
CACNB3-215ENST00000550190 BMP8BP34820 402 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 PIK3CAP42336 1068 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 OR1G1P47890 313 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 FMO5P49326 533 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 MXI1P50539 228 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 AP3M2P53677 418 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 FANCCQ00597 558 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 MYL7Q01449 175 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 SOX4Q06945 474 aaPredicted RBP9.72□□□□□ -0.85
CACNB3-215ENST00000550190 TRPC3Q13507 836 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 ZBTB6Q15916 424 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 KRT39Q6A163 491 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 SV2AQ7L0J3 742 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 TRAPPC11Q7Z392 1133 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 CMTR2Q8IYT2 770 aaKnown RBP9.72□□□□□ -0.85
CACNB3-215ENST00000550190 LRRC43Q8N309 656 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 FIBCD1Q8N539 461 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 ZNF689Q96CS4 500 aaPredicted RBP9.72□□□□□ -0.85
CACNB3-215ENST00000550190 TSPAN18Q96SJ8 248 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 RAD9AQ99638 391 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 NDST4Q9H3R1 872 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 NRDE2Q9H7Z3 1164 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 TMEM8AQ9HCN3 771 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.72□□□□□ -0.85
CACNB3-215ENST00000550190 DNAJB4Q9UDY4 337 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 AGAP1Q9UPQ3 857 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 C2CD2Q9Y426 696 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 SCN1AP35498 2009 aa9.72□□□□□ -0.85
CACNB3-215ENST00000550190 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.71□□□□□ -0.86
CACNB3-215ENST00000550190 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.71□□□□□ -0.86
CACNB3-215ENST00000550190 NT5C1B-RDH14C9J2C7 533 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 INPPL1O15357 1258 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 N4BP1O75113 896 aaKnown RBP9.71□□□□□ -0.86
CACNB3-215ENST00000550190 CST3P01034 146 aaPredicted RBP9.71□□□□□ -0.86
CACNB3-215ENST00000550190 HLA-DRAP01903 254 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 ALDH2P05091 517 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 MYOGP15173 224 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 CYP3A5P20815 502 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 GTF2H1P32780 548 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 CLCNKBP51801 687 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 UBASH3AP57075 661 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 CLDN10P78369 228 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 RBP5P82980 135 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 HTRA4P83105 476 aaPredicted RBP9.71□□□□□ -0.86
CACNB3-215ENST00000550190 UBXN1Q04323 297 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 ENPEPQ07075 957 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 CETN1Q12798 172 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 TUSC3Q13454 348 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 NAB2Q15742 525 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 CBWD6Q4V339 395 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 CBWD3Q5JTY5 395 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 MIIPQ5JXC2 388 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 CBWD5Q5RIA9 395 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 FKBP15Q5T1M5 1219 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 TDRD10Q5VZ19 366 aaKnown RBP9.71□□□□□ -0.86
CACNB3-215ENST00000550190 C9orf57Q5W0N0 161 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 SCARA3Q6AZY7 606 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 FAM109BQ6ICB4 259 aaPredicted RBP9.71□□□□□ -0.86
CACNB3-215ENST00000550190 COLGALT2Q8IYK4 626 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 TDHQ8IZJ6 230 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 C1orf127Q8N9H9 656 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 ELMO3Q96BJ8 720 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 PCMTD1Q96MG8 357 aaPredicted RBP9.71□□□□□ -0.86
CACNB3-215ENST00000550190 NAP1L5Q96NT1 182 aaPredicted RBP9.71□□□□□ -0.86
CACNB3-215ENST00000550190 PAAF1Q9BRP4 392 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 CWH43Q9H720 699 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 IFNKQ9P0W0 207 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 ITGA11Q9UKX5 1188 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 FAN1Q9Y2M0 1017 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 PRG3Q9Y2Y8 225 aaPredicted RBP9.71□□□□□ -0.86
CACNB3-215ENST00000550190 MRPL42Q9Y6G3 142 aaKnown RBP9.71□□□□□ -0.86
CACNB3-215ENST00000550190 COL4A6Q14031 1691 aa9.71□□□□□ -0.86
CACNB3-215ENST00000550190 LCHNA4D1U4 455 aa9.7□□□□□ -0.86
CACNB3-215ENST00000550190 PODXLO00592 558 aa9.7□□□□□ -0.86
CACNB3-215ENST00000550190 NRP1O14786 923 aa9.7□□□□□ -0.86
CACNB3-215ENST00000550190 PPEF2O14830 753 aa9.7□□□□□ -0.86
CACNB3-215ENST00000550190 AP5Z1O43299 807 aa9.7□□□□□ -0.86
CACNB3-215ENST00000550190 B4GALT3O60512 393 aa9.7□□□□□ -0.86
CACNB3-215ENST00000550190 VNN1O95497 513 aa9.7□□□□□ -0.86
CACNB3-215ENST00000550190 PBX2P40425 430 aa9.7□□□□□ -0.86
CACNB3-215ENST00000550190 PBX3P40426 434 aa9.7□□□□□ -0.86
CACNB3-215ENST00000550190 SLC11A1P49279 550 aa9.7□□□□□ -0.86
CACNB3-215ENST00000550190 ALDH7A1P49419 539 aaKnown RBP9.7□□□□□ -0.86
CACNB3-215ENST00000550190 BCAR1P56945 870 aa9.7□□□□□ -0.86
CACNB3-215ENST00000550190 MYL6P60660 151 aa9.7□□□□□ -0.86
CACNB3-215ENST00000550190 LRMPQ12912 555 aa9.7□□□□□ -0.86
CACNB3-215ENST00000550190 NCOA4Q13772 614 aa9.7□□□□□ -0.86
CACNB3-215ENST00000550190 PTPN21Q16825 1174 aa9.7□□□□□ -0.86
CACNB3-215ENST00000550190 ZACNQ401N2 412 aa9.7□□□□□ -0.86
CACNB3-215ENST00000550190 GBP6Q6ZN66 633 aa9.7□□□□□ -0.86
CACNB3-215ENST00000550190 CCDC150Q8NCX0 1101 aa9.7□□□□□ -0.86
CACNB3-215ENST00000550190 FBXL13Q8NEE6 735 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms