RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.6□□□□□ -0.23
CALCOCO1-217ENST00000549935 APBB1IPQ7Z5R6 666 aaPredicted RBP13.6□□□□□ -0.23
CALCOCO1-217ENST00000549935 VSIG1Q86XK7 387 aa13.6□□□□□ -0.23
CALCOCO1-217ENST00000549935 TDRPQ86YL5 185 aa13.6□□□□□ -0.23
CALCOCO1-217ENST00000549935 ARHGEF19Q8IW93 802 aa13.6□□□□□ -0.23
CALCOCO1-217ENST00000549935 NLGN1Q8N2Q7 840 aa13.6□□□□□ -0.23
CALCOCO1-217ENST00000549935 ATL2Q8NHH9 583 aa13.6□□□□□ -0.23
CALCOCO1-217ENST00000549935 PCIF1Q9H4Z3 704 aa13.6□□□□□ -0.23
CALCOCO1-217ENST00000549935 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.6□□□□□ -0.23
CALCOCO1-217ENST00000549935 ANAPC5Q9UJX4 755 aa13.6□□□□□ -0.23
CALCOCO1-217ENST00000549935 ATRNL1Q5VV63 1379 aa13.59□□□□□ -0.23
CALCOCO1-217ENST00000549935 MROH7Q68CQ1 1323 aa13.59□□□□□ -0.23
CALCOCO1-217ENST00000549935 CLDN3O15551 220 aa13.59□□□□□ -0.23
CALCOCO1-217ENST00000549935 MMP10P09238 476 aa13.59□□□□□ -0.23
CALCOCO1-217ENST00000549935 ATF2P15336 505 aa13.59□□□□□ -0.23
CALCOCO1-217ENST00000549935 CDC25CP30307 473 aa13.59□□□□□ -0.23
CALCOCO1-217ENST00000549935 INHBEP58166 350 aa13.59□□□□□ -0.23
CALCOCO1-217ENST00000549935 ZYXQ15942 572 aaKnown RBP13.59□□□□□ -0.23
CALCOCO1-217ENST00000549935 NOP9Q86U38 636 aaKnown RBP13.59□□□□□ -0.23
CALCOCO1-217ENST00000549935 SRRM1Q8IYB3 904 aaKnown RBP13.59□□□□□ -0.23
CALCOCO1-217ENST00000549935 FBXO41Q8TF61 875 aa13.59□□□□□ -0.23
CALCOCO1-217ENST00000549935 SLC7A6OSQ96CW6 309 aaPredicted RBP13.59□□□□□ -0.23
CALCOCO1-217ENST00000549935 ERP27Q96DN0 273 aa13.59□□□□□ -0.23
CALCOCO1-217ENST00000549935 PRMT6Q96LA8 375 aaPredicted RBP13.59□□□□□ -0.23
CALCOCO1-217ENST00000549935 DCLK3Q9C098 648 aa13.59□□□□□ -0.23
CALCOCO1-217ENST00000549935 PKD2L1Q9P0L9 805 aa13.59□□□□□ -0.23
CALCOCO1-217ENST00000549935 LNPEPQ9UIQ6 1025 aa13.59□□□□□ -0.23
CALCOCO1-217ENST00000549935 EMSYQ7Z589 1322 aa13.59□□□□□ -0.23
CALCOCO1-217ENST00000549935 EME2A4GXA9 379 aaPredicted RBP13.58□□□□□ -0.23
CALCOCO1-217ENST00000549935 IPO5O00410 1097 aaKnown RBP13.58□□□□□ -0.23
CALCOCO1-217ENST00000549935 T-ENOLP0DO92 83 aa13.58□□□□□ -0.23
CALCOCO1-217ENST00000549935 DLATP10515 647 aaKnown RBP13.58□□□□□ -0.23
CALCOCO1-217ENST00000549935 MAPTP10636 758 aaKnown RBP13.58□□□□□ -0.23
CALCOCO1-217ENST00000549935 NEFHP12036 1026 aa13.58□□□□□ -0.23
CALCOCO1-217ENST00000549935 PECAM1P16284 738 aaPredicted RBP13.58□□□□□ -0.23
CALCOCO1-217ENST00000549935 RAD23BP54727 409 aa13.58□□□□□ -0.23
CALCOCO1-217ENST00000549935 FKBP1AP62942 108 aaKnown RBP13.58□□□□□ -0.23
CALCOCO1-217ENST00000549935 AP1ARQ63HQ0 302 aa13.58□□□□□ -0.23
CALCOCO1-217ENST00000549935 DAW1Q8N136 415 aa13.58□□□□□ -0.23
CALCOCO1-217ENST00000549935 ZNF398Q8TD17 642 aa13.58□□□□□ -0.23
CALCOCO1-217ENST00000549935 C1orf54Q8WWF1 131 aa13.58□□□□□ -0.23
CALCOCO1-217ENST00000549935 WDR11Q9BZH6 1224 aa13.58□□□□□ -0.23
CALCOCO1-217ENST00000549935 SENP1Q9P0U3 644 aa13.58□□□□□ -0.23
CALCOCO1-217ENST00000549935 CHORDC1Q9UHD1 332 aaPredicted RBP13.58□□□□□ -0.23
CALCOCO1-217ENST00000549935 PHTF1Q9UMS5 762 aa13.58□□□□□ -0.23
CALCOCO1-217ENST00000549935 DPPA5A6NC42 116 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 RASA4BC9J798 803 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 RASA4O43374 803 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 EDF1O60869 148 aaKnown RBP13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 ENTPD3O75355 529 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 SGPL1O95470 568 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 VIL1P09327 827 aaKnown RBP13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 GM2AP17900 193 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 PEX19P40855 299 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 CTCFP49711 727 aaPredicted RBP13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 VAMP7P51809 220 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 FMO1Q01740 532 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 PTP4A2Q12974 167 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 ALCAMQ13740 583 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 SPARCL1Q14515 664 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 RASA3Q14644 834 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 RASA2Q15283 850 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 RBBP5Q15291 538 aaKnown RBP13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 PDK4Q16654 411 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 AOC3Q16853 763 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 ZNF746Q6NUN9 644 aaPredicted RBP13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 TRABD2AQ86V40 505 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 SPDYE1Q8NFV5 336 aaPredicted RBP13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 KCNV2Q8TDN2 545 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 NUDCD1Q96RS6 583 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 FAM167BQ9BTA0 163 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 TEKT3Q9BXF9 490 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 TBC1D10AQ9BXI6 508 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 DCLRE1BQ9H816 532 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 SAR1AQ9NR31 198 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 CHST7Q9NS84 486 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 SMG5Q9UPR3 1016 aaKnown RBP13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 ASB3Q9Y575 518 aa13.58□□□□□ -0.24
CALCOCO1-217ENST00000549935 LRRD1A4D1F6 860 aa13.57□□□□□ -0.24
CALCOCO1-217ENST00000549935 TCP10L2B9ZVM9 353 aa13.57□□□□□ -0.24
CALCOCO1-217ENST00000549935 CNGA1P29973 690 aa13.57□□□□□ -0.24
CALCOCO1-217ENST00000549935 SLC1A1P43005 524 aa13.57□□□□□ -0.24
CALCOCO1-217ENST00000549935 GCLMP48507 274 aa13.57□□□□□ -0.24
CALCOCO1-217ENST00000549935 PPP3CAQ08209 521 aa13.57□□□□□ -0.24
CALCOCO1-217ENST00000549935 TRAF1Q13077 416 aa13.57□□□□□ -0.24
CALCOCO1-217ENST00000549935 TSNAXIP1Q2TAA8 658 aa13.57□□□□□ -0.24
CALCOCO1-217ENST00000549935 SLC45A4Q5BKX6 768 aa13.57□□□□□ -0.24
CALCOCO1-217ENST00000549935 CC2D2BQ6DHV5 1058 aa13.57□□□□□ -0.24
CALCOCO1-217ENST00000549935 SLC30A9Q6PML9 568 aa13.57□□□□□ -0.24
CALCOCO1-217ENST00000549935 PADI6Q6TGC4 694 aa13.57□□□□□ -0.24
CALCOCO1-217ENST00000549935 MFN1Q8IWA4 741 aa13.57□□□□□ -0.24
CALCOCO1-217ENST00000549935 CCDC89Q8N998 374 aa13.57□□□□□ -0.24
CALCOCO1-217ENST00000549935 RBBP8NLQ8NC74 664 aaPredicted RBP13.57□□□□□ -0.24
CALCOCO1-217ENST00000549935 ZFAND2BQ8WV99 257 aa13.57□□□□□ -0.24
CALCOCO1-217ENST00000549935 SHC3Q92529 594 aa13.57□□□□□ -0.24
CALCOCO1-217ENST00000549935 ZNF653Q96CK0 615 aa13.57□□□□□ -0.24
CALCOCO1-217ENST00000549935 YIPF3Q9GZM5 350 aa13.57□□□□□ -0.24
CALCOCO1-217ENST00000549935 KIAA1683Q9H0B3 1180 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms