RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 C2CD4DB7Z1M9 353 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 F8W810 466 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 K7ENM7 598 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 M0R296 226 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 HNRNPDLO14979 420 aaKnown RBP11.39□□□□□ -0.59
CCDC38-207ENST00000549752 TGM5O43548 720 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 TRAK2O60296 914 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 CLTAP09496 248 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 HARSP12081 509 aaKnown RBP11.39□□□□□ -0.59
CCDC38-207ENST00000549752 CLCNKBP51801 687 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 ZNF131P52739 623 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 OSTNP61366 133 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 MCL1Q07820 350 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 RESTQ13127 1097 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 UPP1Q16831 310 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 ARSHQ5FYA8 562 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 GLRA4Q5JXX5 417 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 RRAGBQ5VZM2 374 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 CCDC73Q6ZRK6 1079 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 ANKS3Q6ZW76 656 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 TAS1R3Q7RTX0 852 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 METTL3Q86U44 580 aaKnown RBP11.39□□□□□ -0.59
CCDC38-207ENST00000549752 PALB2Q86YC2 1186 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 SUGP1Q8IWZ8 645 aaKnown RBP11.39□□□□□ -0.59
CCDC38-207ENST00000549752 KREMEN2Q8NCW0 462 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 HASPINQ8TF76 798 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 SMG7Q92540 1137 aaKnown RBP11.39□□□□□ -0.59
CCDC38-207ENST00000549752 ZDHHC16Q969W1 377 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 FAM122AQ96E09 287 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 ZNF396Q96N95 335 aaPredicted RBP11.39□□□□□ -0.59
CCDC38-207ENST00000549752 PRRX2Q99811 253 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 PAAF1Q9BRP4 392 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 ZHX3Q9H4I2 956 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 BLOC1S4Q9NUP1 217 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 CNTN3Q9P232 1028 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 SEL1LQ9UBV2 794 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 CLIC4Q9Y696 253 aa11.39□□□□□ -0.59
CCDC38-207ENST00000549752 ZNF638Q14966 1978 aaKnown RBP11.38□□□□□ -0.59
CCDC38-207ENST00000549752 XYLBO75191 536 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 PAPLNO95428 1278 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 PIGRP01833 764 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 HNRNPA1P09651 372 aaKnown RBP eCLIP11.38□□□□□ -0.59
CCDC38-207ENST00000549752 WEE2P0C1S8 567 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 FGFR3P22607 806 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 SP100P23497 879 aaPredicted RBP11.38□□□□□ -0.59
CCDC38-207ENST00000549752 MARCKSP29966 332 aaPredicted RBP11.38□□□□□ -0.59
CCDC38-207ENST00000549752 HOXA9P31269 272 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 MCM6Q14566 821 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 PTPAQ15257 358 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 UVSSAQ2YD98 709 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 RTP2Q5QGT7 225 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 SV2BQ7L1I2 683 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 GLYCTKQ8IVS8 523 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 CD302Q8IX05 232 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 CEP120Q8N960 986 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 LNX1Q8TBB1 728 aaPredicted RBP11.38□□□□□ -0.59
CCDC38-207ENST00000549752 RABGGTAQ92696 567 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 NXPE3Q969Y0 559 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 PBXIP1Q96AQ6 731 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 HVCN1Q96D96 273 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 B3GALT6Q96L58 329 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 REPIN1Q9BWE0 567 aaKnown RBP11.38□□□□□ -0.59
CCDC38-207ENST00000549752 PRKD2Q9BZL6 878 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 WDR6Q9NNW5 1121 aaKnown RBP11.38□□□□□ -0.59
CCDC38-207ENST00000549752 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.38□□□□□ -0.59
CCDC38-207ENST00000549752 TBX20Q9UMR3 447 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 MTMR6Q9Y217 621 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 NUB1Q9Y5A7 615 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 ZFP37Q9Y6Q3 630 aaPredicted RBP11.38□□□□□ -0.59
CCDC38-207ENST00000549752 SCN1AP35498 2009 aa11.38□□□□□ -0.59
CCDC38-207ENST00000549752 CLUHO75153 1309 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 MIA3Q5JRA6 1907 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 NOTCH4Q99466 2003 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 NPHP3-ACAD11A0A0J9YXS1 232 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 H7C4K7 107 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 PODXLO00592 558 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 ABLIM1O14639 778 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 SYN3O14994 580 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 OGTO15294 1046 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 GAP43P17677 238 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 PAX3P23760 479 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 PLA2G5P39877 138 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 CEBPZQ03701 1054 aaKnown RBP11.37□□□□□ -0.59
CCDC38-207ENST00000549752 PPP2R3AQ06190 1150 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 RAB33AQ14088 237 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 SLC39A14Q15043 492 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 STK38Q15208 465 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 PPM1LQ5SGD2 360 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 C6orf132Q5T0Z8 1188 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 SLFN12LQ6IEE8 588 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 LILRA6Q6PI73 481 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 PRSS55Q6UWB4 352 aaPredicted RBP11.37□□□□□ -0.59
CCDC38-207ENST00000549752 HFE2Q6ZVN8 426 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 APPL2Q8NEU8 664 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 EPSTI1Q96J88 318 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 ZBTB45Q96K62 511 aaPredicted RBP11.37□□□□□ -0.59
CCDC38-207ENST00000549752 CLSTN3Q9BQT9 956 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 OXCT2Q9BYC2 517 aaPredicted RBP11.37□□□□□ -0.59
CCDC38-207ENST00000549752 LRRC27Q9C0I9 530 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 ST6GALNAC4Q9H4F1 302 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms