RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 FERMT2Q96AC1 680 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 PAWRQ96IZ0 340 aaKnown RBP3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 HIRIP3Q9BW71 556 aaPredicted RBP3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 REXO4Q9GZR2 422 aaKnown RBP3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 POFUT1Q9H488 388 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 INTS7Q9NVH2 962 aaKnown RBP3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 POGKQ9P215 609 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 B4GALT6Q9UBX8 382 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 ATP11BQ9Y2G3 1177 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 TBX22Q9Y458 520 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 NOX1Q9Y5S8 564 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 PLEKHG1Q9ULL1 1385 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 CCDC141Q6ZP82 1450 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 USP19O94966 1318 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 MYPNQ86TC9 1320 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 SLIT2O94813 1529 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 COL11A2P13942 1736 aaPredicted RBP3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 NALCNQ8IZF0 1738 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 MYOM1P52179 1685 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 ADGRB2O60241 1585 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 NRKQ7Z2Y5 1582 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 COL3A1P02461 1466 aaPredicted RBP3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 CCNB3Q8WWL7 1395 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 PIK3R4Q99570 1358 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 TBKBP1A7MCY6 615 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 PLD2O14939 933 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 ORC4O43929 436 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 PCDH8O95206 1070 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 MATN4O95460 622 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 GASTP01350 101 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 CLEC2LP0C7M8 214 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 SIM1P81133 766 aaPredicted RBP3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 MRPS35P82673 323 aaKnown RBP3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 CD69Q07108 199 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 IDI1Q13907 227 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 SF3A1Q15459 793 aaKnown RBP3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 GPR162Q16538 588 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 NBPF8Q3BBV2 869 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 FAM102AQ5T9C2 384 aaPredicted RBP3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 ESRP1Q6NXG1 681 aaKnown RBP3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 Q6ZNX1 250 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 UBE2R2Q712K3 238 aaPredicted RBP3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 SYT12Q8IV01 421 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 PASD1Q8IV76 773 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 SREK1Q8WXA9 508 aaKnown RBP3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 TFAP2CQ92754 450 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 CAMKK2Q96RR4 588 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 WNT8AQ9H1J5 351 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 NCOA5Q9HCD5 579 aaKnown RBP3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 TBCCD1Q9NVR7 557 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 ZNF70Q9UC06 446 aaPredicted RBP3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 DMTF1Q9Y222 760 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 NWD2Q9ULI1 1742 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 PTPN23Q9H3S7 1636 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 TRPM2O94759 1503 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 EHBP1L1Q8N3D4 1523 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 ZFYVE9O95405 1425 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 CASKIN1Q8WXD9 1431 aa3.44□□□□□ -1.86
DEPDC4-204ENST00000547823 CASZ1Q86V15 1759 aa3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 PLCH1Q4KWH8 1693 aa3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 MTUS2Q5JR59 1369 aa3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 A0A1W2PR48 441 aa3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 PLA2G5P39877 138 aa3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 LRRC32Q14392 662 aa3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 BMT2Q1RMZ1 405 aa3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 C19orf54Q5BKX5 351 aa3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 GJC2Q5T442 439 aaPredicted RBP3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 AGAP9Q5VTM2 703 aa3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 NPM2Q86SE8 214 aaKnown RBP3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 ARHGEF25Q86VW2 580 aa3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 XYLT1Q86Y38 959 aa3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 RHOT2Q8IXI1 618 aa3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 FAM43AQ8N2R8 423 aa3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 DEPDC7Q96QD5 511 aa3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 ELF4Q99607 663 aaPredicted RBP3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 TOMM22Q9NS69 142 aa3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 USP15Q9Y4E8 981 aaPredicted RBP3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 XRN1Q8IZH2 1706 aaKnown RBP3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 ADAMTS13Q76LX8 1427 aa3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 PTPRUQ92729 1446 aa3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 GCC2Q8IWJ2 1684 aa3.43□□□□□ -1.86
DEPDC4-204ENST00000547823 RPRD2Q5VT52 1461 aaKnown RBP3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 PARD3Q8TEW0 1356 aa3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 TMEM131LA2VDJ0 1609 aa3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 FAM221BA6H8Z2 402 aa3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 CBX4O00257 560 aa3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 PJA2O43164 708 aa3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 KCNAB3O43448 404 aa3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 OPA1O60313 960 aa3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 ONECUT2O95948 504 aa3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 LTA4HP09960 611 aaKnown RBP3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 HSPA1AP0DMV8 641 aaKnown RBP3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 HSPA1BP0DMV9 641 aaKnown RBP3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 PTTG1IPP53801 180 aa3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 SRSF4Q08170 494 aaKnown RBP3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 FNDC3BQ53EP0 1204 aaKnown RBP3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 UNQ6494/PRO21346Q6UXR6 183 aa3.42□□□□□ -1.86
DEPDC4-204ENST00000547823 GRASPQ7Z6J2 395 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms