RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 SCFD1Q8WVM8 642 aa20.36■□□□□ 0.85
PRPF40B-206ENST00000547764 RIN2Q8WYP3 895 aaPredicted RBP20.36■□□□□ 0.85
PRPF40B-206ENST00000547764 SAAL1Q96ER3 474 aa20.36■□□□□ 0.85
PRPF40B-206ENST00000547764 TSPAN18Q96SJ8 248 aa20.36■□□□□ 0.85
PRPF40B-206ENST00000547764 FAM213AQ9BRX8 229 aa20.36■□□□□ 0.85
PRPF40B-206ENST00000547764 RXFP1Q9HBX9 757 aa20.36■□□□□ 0.85
PRPF40B-206ENST00000547764 CHMP5Q9NZZ3 219 aa20.36■□□□□ 0.85
PRPF40B-206ENST00000547764 UBQLN1Q9UMX0 589 aaKnown RBP20.36■□□□□ 0.85
PRPF40B-206ENST00000547764 PDCD11Q14690 1871 aaKnown RBP20.36■□□□□ 0.85
PRPF40B-206ENST00000547764 TEX28O15482 410 aa20.35■□□□□ 0.85
PRPF40B-206ENST00000547764 PRR29P0C7W0 189 aa20.35■□□□□ 0.85
PRPF40B-206ENST00000547764 IL9P15248 144 aa20.35■□□□□ 0.85
PRPF40B-206ENST00000547764 POU5F1Q01860 360 aaKnown RBP20.35■□□□□ 0.85
PRPF40B-206ENST00000547764 ANKRD54Q6NXT1 300 aa20.35■□□□□ 0.85
PRPF40B-206ENST00000547764 ARMCX5Q6P1M9 558 aa20.35■□□□□ 0.85
PRPF40B-206ENST00000547764 PPFIBP1Q86W92 1011 aa20.35■□□□□ 0.85
PRPF40B-206ENST00000547764 CEP57Q86XR8 500 aa20.35■□□□□ 0.85
PRPF40B-206ENST00000547764 GPR65Q8IYL9 337 aa20.35■□□□□ 0.85
PRPF40B-206ENST00000547764 FMR1NBQ8N0W7 255 aaPredicted RBP20.35■□□□□ 0.85
PRPF40B-206ENST00000547764 CASP10Q92851 521 aa20.35■□□□□ 0.85
PRPF40B-206ENST00000547764 TTPALQ9BTX7 342 aa20.35■□□□□ 0.85
PRPF40B-206ENST00000547764 PCIF1Q9H4Z3 704 aa20.35■□□□□ 0.85
PRPF40B-206ENST00000547764 ASB7Q9H672 318 aa20.35■□□□□ 0.85
PRPF40B-206ENST00000547764 EXOC1Q9NV70 894 aa20.35■□□□□ 0.85
PRPF40B-206ENST00000547764 UBE4BO95155 1302 aa20.34■□□□□ 0.85
PRPF40B-206ENST00000547764 GOLGA8IPA6NC78 632 aa20.34■□□□□ 0.85
PRPF40B-206ENST00000547764 GOLGA8JA6NMD2 632 aa20.34■□□□□ 0.85
PRPF40B-206ENST00000547764 I3L4J1 428 aa20.34■□□□□ 0.85
PRPF40B-206ENST00000547764 MBTPS2O43462 519 aa20.34■□□□□ 0.85
PRPF40B-206ENST00000547764 LDHAP00338 332 aaKnown RBP20.34■□□□□ 0.85
PRPF40B-206ENST00000547764 RPN1P04843 607 aaKnown RBP20.34■□□□□ 0.85
PRPF40B-206ENST00000547764 NFICP08651 508 aa20.34■□□□□ 0.85
PRPF40B-206ENST00000547764 EPCAMP16422 314 aa20.34■□□□□ 0.85
PRPF40B-206ENST00000547764 CYP3A5P20815 502 aa20.34■□□□□ 0.85
PRPF40B-206ENST00000547764 LRPAP1P30533 357 aa20.34■□□□□ 0.85
PRPF40B-206ENST00000547764 BRCC3P46736 316 aa20.34■□□□□ 0.85
PRPF40B-206ENST00000547764 STK4Q13043 487 aa20.34■□□□□ 0.85
PRPF40B-206ENST00000547764 SMAD4Q13485 552 aaKnown RBP20.34■□□□□ 0.85
PRPF40B-206ENST00000547764 PRSS55Q6UWB4 352 aaPredicted RBP20.34■□□□□ 0.85
PRPF40B-206ENST00000547764 NELFCDQ8IXH7 590 aa20.34■□□□□ 0.85
PRPF40B-206ENST00000547764 SMRP1Q8NCR6 262 aa20.34■□□□□ 0.85
PRPF40B-206ENST00000547764 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.34■□□□□ 0.85
PRPF40B-206ENST00000547764 TGFB1I1O43294 461 aa20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 XPOTO43592 962 aaKnown RBP20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 TRAPPC3O43617 180 aa20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 EXTL3O43909 919 aa20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 ADH1AP07327 375 aa20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 RPL17P18621 184 aaKnown RBP20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 FGFR3P22607 806 aa20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 CLCN4P51793 760 aa20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 GUCY2FP51841 1108 aa20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 DPYDQ12882 1025 aa20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 PSMD2Q13200 908 aa20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 SNW1Q13573 536 aaKnown RBP20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 TMEM132DQ14C87 1099 aa20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 BMT2Q1RMZ1 405 aa20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 SPATA1Q5VX52 437 aa20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 SYCE2Q6PIF2 218 aa20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 KIAA0895Q8NCT3 520 aa20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 ENGASEQ8NFI3 743 aa20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 LNX1Q8TBB1 728 aaPredicted RBP20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 PIK3R5Q8WYR1 880 aa20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 NECAB3Q96P71 396 aaPredicted RBP20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 FNIP2Q9P278 1114 aa20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 DERAQ9Y315 318 aa20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 NUB1Q9Y5A7 615 aa20.33■□□□□ 0.85
PRPF40B-206ENST00000547764 KIAA0391O15091 583 aaKnown RBP20.32■□□□□ 0.84
PRPF40B-206ENST00000547764 IL18RAPO95256 599 aa20.32■□□□□ 0.84
PRPF40B-206ENST00000547764 HOXB8P17481 243 aaPredicted RBP20.32■□□□□ 0.84
PRPF40B-206ENST00000547764 TKTP29401 623 aaKnown RBP20.32■□□□□ 0.84
PRPF40B-206ENST00000547764 KANK3Q6NY19 840 aa20.32■□□□□ 0.84
PRPF40B-206ENST00000547764 BRSK2Q8IWQ3 736 aa20.32■□□□□ 0.84
PRPF40B-206ENST00000547764 GPD1LQ8N335 351 aa20.32■□□□□ 0.84
PRPF40B-206ENST00000547764 BEST2Q8NFU1 509 aa20.32■□□□□ 0.84
PRPF40B-206ENST00000547764 NOC3LQ8WTT2 800 aaKnown RBP20.32■□□□□ 0.84
PRPF40B-206ENST00000547764 UHRF1Q96T88 793 aaPredicted RBP20.32■□□□□ 0.84
PRPF40B-206ENST00000547764 S1PR5Q9H228 398 aa20.32■□□□□ 0.84
PRPF40B-206ENST00000547764 AGPAT3Q9NRZ7 376 aa20.32■□□□□ 0.84
PRPF40B-206ENST00000547764 FAM50BQ9Y247 325 aa20.32■□□□□ 0.84
PRPF40B-206ENST00000547764 C2CD2Q9Y426 696 aa20.32■□□□□ 0.84
PRPF40B-206ENST00000547764 ANK1P16157 1881 aa20.32■□□□□ 0.84
PRPF40B-206ENST00000547764 TTC28Q96AY4 2481 aa20.32■□□□□ 0.84
PRPF40B-206ENST00000547764 VWA8A3KMH1 1905 aa20.31■□□□□ 0.84
PRPF40B-206ENST00000547764 DLL1O00548 723 aa20.31■□□□□ 0.84
PRPF40B-206ENST00000547764 WNT7BP56706 349 aa20.31■□□□□ 0.84
PRPF40B-206ENST00000547764 CREMQ03060 361 aa20.31■□□□□ 0.84
PRPF40B-206ENST00000547764 FAM160A1Q05DH4 1040 aa20.31■□□□□ 0.84
PRPF40B-206ENST00000547764 SMAD2Q15796 467 aaKnown RBP20.31■□□□□ 0.84
PRPF40B-206ENST00000547764 PSMD5Q16401 504 aa20.31■□□□□ 0.84
PRPF40B-206ENST00000547764 KNOP1Q1ED39 458 aaKnown RBP20.31■□□□□ 0.84
PRPF40B-206ENST00000547764 GLYCTKQ8IVS8 523 aa20.31■□□□□ 0.84
PRPF40B-206ENST00000547764 EFCAB13Q8IY85 973 aa20.31■□□□□ 0.84
PRPF40B-206ENST00000547764 CCDC34Q96HJ3 373 aa20.31■□□□□ 0.84
PRPF40B-206ENST00000547764 FBXL18Q96ME1 805 aa20.31■□□□□ 0.84
PRPF40B-206ENST00000547764 APOL5Q9BWW9 433 aa20.31■□□□□ 0.84
PRPF40B-206ENST00000547764 RBAKQ9NYW8 714 aaPredicted RBP20.31■□□□□ 0.84
PRPF40B-206ENST00000547764 HSPBP1Q9NZL4 362 aa20.31■□□□□ 0.84
PRPF40B-206ENST00000547764 TULP1O00294 542 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms