RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 C15orf39Q6ZRI6 1047 aa16.09■□□□□ 0.17
CCDC38-205ENST00000546947 C3orf58Q8NDZ4 430 aa16.09■□□□□ 0.17
CCDC38-205ENST00000546947 CMASQ8NFW8 434 aaPredicted RBP16.09■□□□□ 0.17
CCDC38-205ENST00000546947 STAMQ92783 540 aa16.09■□□□□ 0.17
CCDC38-205ENST00000546947 KHSRPQ92945 711 aaKnown RBP eCLIP16.09■□□□□ 0.17
CCDC38-205ENST00000546947 C18orf25Q96B23 403 aaPredicted RBP16.09■□□□□ 0.17
CCDC38-205ENST00000546947 ACCSQ96QU6 501 aa16.09■□□□□ 0.17
CCDC38-205ENST00000546947 C1QTNF1Q9BXJ1 281 aa16.09■□□□□ 0.17
CCDC38-205ENST00000546947 PLEKHA4Q9H4M7 779 aa16.09■□□□□ 0.17
CCDC38-205ENST00000546947 MAN1C1Q9NR34 630 aa16.09■□□□□ 0.17
CCDC38-205ENST00000546947 TBC1D7Q9P0N9 293 aa16.09■□□□□ 0.17
CCDC38-205ENST00000546947 CPSF3Q9UKF6 684 aaKnown RBP16.09■□□□□ 0.17
CCDC38-205ENST00000546947 UBQLN1Q9UMX0 589 aaKnown RBP16.09■□□□□ 0.17
CCDC38-205ENST00000546947 ATP6V1DQ9Y5K8 247 aa16.09■□□□□ 0.17
CCDC38-205ENST00000546947 LACTBL1A8MY62 500 aa16.08■□□□□ 0.16
CCDC38-205ENST00000546947 POLR2DO15514 142 aaKnown RBP16.08■□□□□ 0.16
CCDC38-205ENST00000546947 TGM5O43548 720 aa16.08■□□□□ 0.16
CCDC38-205ENST00000546947 ALADP13716 330 aa16.08■□□□□ 0.16
CCDC38-205ENST00000546947 CYP3A5P20815 502 aa16.08■□□□□ 0.16
CCDC38-205ENST00000546947 ENOX2Q16206 610 aaKnown RBP16.08■□□□□ 0.16
CCDC38-205ENST00000546947 ADALQ6DHV7 355 aa16.08■□□□□ 0.16
CCDC38-205ENST00000546947 CNNM4Q6P4Q7 775 aa16.08■□□□□ 0.16
CCDC38-205ENST00000546947 TMC5Q6UXY8 1006 aa16.08■□□□□ 0.16
CCDC38-205ENST00000546947 CYP26C1Q6V0L0 522 aa16.08■□□□□ 0.16
CCDC38-205ENST00000546947 PALB2Q86YC2 1186 aa16.08■□□□□ 0.16
CCDC38-205ENST00000546947 KIF12Q96FN5 646 aa16.08■□□□□ 0.16
CCDC38-205ENST00000546947 TRIM9Q9C026 710 aa16.08■□□□□ 0.16
CCDC38-205ENST00000546947 POMKQ9H5K3 350 aa16.08■□□□□ 0.16
CCDC38-205ENST00000546947 AGO2Q9UKV8 859 aaKnown RBP16.08■□□□□ 0.16
CCDC38-205ENST00000546947 NR2E1Q9Y466 385 aa16.08■□□□□ 0.16
CCDC38-205ENST00000546947 DCXO43602 365 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 MYBP10242 640 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 RPL17P18621 184 aaKnown RBP16.07■□□□□ 0.16
CCDC38-205ENST00000546947 IGFBP6P24592 240 aaPredicted RBP16.07■□□□□ 0.16
CCDC38-205ENST00000546947 LRPAP1P30533 357 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 BRCC3P46736 316 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 CASP5P51878 434 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 ZBTB6Q15916 424 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 ZBTB41Q5SVQ8 909 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 LILRA6Q6PI73 481 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 ANKS3Q6ZW76 656 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 STXBP4Q6ZWJ1 553 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 GPR149Q86SP6 731 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 RNF135Q8IUD6 432 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 GLYCTKQ8IVS8 523 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 POMGNT1Q8WZA1 660 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 RPGRIP1Q96KN7 1286 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 SPATA32Q96LK8 384 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 C7orf25Q9BPX7 421 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 CLSTN3Q9BQT9 956 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 RHOBTB2Q9BYZ6 727 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 EPHX3Q9H6B9 360 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 TMEM206Q9H813 350 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 MTRRQ9UBK8 725 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 TUBGCP4Q9UGJ1 667 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 DERAQ9Y315 318 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 NUB1Q9Y5A7 615 aa16.07■□□□□ 0.16
CCDC38-205ENST00000546947 TISP43B9A030 160 aa16.06■□□□□ 0.16
CCDC38-205ENST00000546947 SYN3O14994 580 aa16.06■□□□□ 0.16
CCDC38-205ENST00000546947 PAPLNO95428 1278 aa16.06■□□□□ 0.16
CCDC38-205ENST00000546947 TKTP29401 623 aaKnown RBP16.06■□□□□ 0.16
CCDC38-205ENST00000546947 ASIC1P78348 528 aa16.06■□□□□ 0.16
CCDC38-205ENST00000546947 SPAG1Q07617 926 aa16.06■□□□□ 0.16
CCDC38-205ENST00000546947 KCNA1Q09470 495 aa16.06■□□□□ 0.16
CCDC38-205ENST00000546947 KANK3Q6NY19 840 aa16.06■□□□□ 0.16
CCDC38-205ENST00000546947 SYCP3Q8IZU3 236 aa16.06■□□□□ 0.16
CCDC38-205ENST00000546947 KREMEN2Q8NCW0 462 aa16.06■□□□□ 0.16
CCDC38-205ENST00000546947 LEO1Q8WVC0 666 aaPredicted RBP16.06■□□□□ 0.16
CCDC38-205ENST00000546947 SUSD3Q96L08 255 aa16.06■□□□□ 0.16
CCDC38-205ENST00000546947 FGFBP2Q9BYJ0 223 aa16.06■□□□□ 0.16
CCDC38-205ENST00000546947 ASB7Q9H672 318 aa16.06■□□□□ 0.16
CCDC38-205ENST00000546947 ZDHHC7Q9NXF8 308 aa16.06■□□□□ 0.16
CCDC38-205ENST00000546947 CDH22Q9UJ99 828 aa16.06■□□□□ 0.16
CCDC38-205ENST00000546947 KCNH3Q9ULD8 1083 aa16.06■□□□□ 0.16
CCDC38-205ENST00000546947 BACE2Q9Y5Z0 518 aa16.06■□□□□ 0.16
CCDC38-205ENST00000546947 CCDC195A0A1B0GUA6 201 aa16.05■□□□□ 0.16
CCDC38-205ENST00000546947 I3L4J1 428 aa16.05■□□□□ 0.16
CCDC38-205ENST00000546947 LDHAP00338 332 aaKnown RBP16.05■□□□□ 0.16
CCDC38-205ENST00000546947 WEE2P0C1S8 567 aa16.05■□□□□ 0.16
CCDC38-205ENST00000546947 GARTP22102 1010 aa16.05■□□□□ 0.16
CCDC38-205ENST00000546947 CMA1P23946 247 aa16.05■□□□□ 0.16
CCDC38-205ENST00000546947 ADSSP30520 456 aa16.05■□□□□ 0.16
CCDC38-205ENST00000546947 MCM4P33991 863 aa16.05■□□□□ 0.16
CCDC38-205ENST00000546947 ACOT2P49753 483 aa16.05■□□□□ 0.16
CCDC38-205ENST00000546947 SPATA1Q5VX52 437 aa16.05■□□□□ 0.16
CCDC38-205ENST00000546947 UNC13DQ70J99 1090 aa16.05■□□□□ 0.16
CCDC38-205ENST00000546947 CEP57L1Q8IYX8 460 aa16.05■□□□□ 0.16
CCDC38-205ENST00000546947 BEST2Q8NFU1 509 aa16.05■□□□□ 0.16
CCDC38-205ENST00000546947 FAM212AQ96EL1 285 aa16.05■□□□□ 0.16
CCDC38-205ENST00000546947 SCAND2PQ9GZW5 306 aaPredicted RBP16.05■□□□□ 0.16
CCDC38-205ENST00000546947 IKZF4Q9H2S9 585 aa16.05■□□□□ 0.16
CCDC38-205ENST00000546947 FBXW11Q9UKB1 542 aa16.05■□□□□ 0.16
CCDC38-205ENST00000546947 BDP1A6H8Y1 2624 aa16.05■□□□□ 0.16
CCDC38-205ENST00000546947 H7C4K7 107 aa16.04■□□□□ 0.16
CCDC38-205ENST00000546947 EIF3DO15371 548 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCDC38-205ENST00000546947 PRPF6O94906 941 aaKnown RBP16.04■□□□□ 0.16
CCDC38-205ENST00000546947 SPATA31D3P0C874 917 aa16.04■□□□□ 0.16
CCDC38-205ENST00000546947 PAX3P23760 479 aa16.04■□□□□ 0.16
CCDC38-205ENST00000546947 RAB33AQ14088 237 aa16.04■□□□□ 0.16
CCDC38-205ENST00000546947 TMEM132DQ14C87 1099 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms