RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 MFSD5Q6N075 450 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 KRBA2Q6ZNG9 492 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 TSHZ1Q6ZSZ6 1077 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 MAP4K3Q8IVH8 894 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 KSR1Q8IVT5 923 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 GRAMD1CQ8IYS0 662 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 NME8Q8N427 588 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 IL22RA1Q8N6P7 574 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 RNF149Q8NC42 400 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 CNNM3Q8NE01 707 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 TTC16Q8NEE8 873 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 ENGASEQ8NFI3 743 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 TMEM40Q8WWA1 233 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 PRPF31Q8WWY3 499 aaKnown RBP6.98□□□□□ -1.29
PRKDC-211ENST00000546304 BSNDQ8WZ55 320 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 STAMQ92783 540 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 CCDC34Q96HJ3 373 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 SCLYQ96I15 445 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 ZNF668Q96K58 619 aaPredicted RBP6.98□□□□□ -1.29
PRKDC-211ENST00000546304 IFT74Q96LB3 600 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 KIFC3Q9BVG8 833 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 CELF4Q9BZC1 486 aaKnown RBP6.98□□□□□ -1.29
PRKDC-211ENST00000546304 MUC3BQ9H195 1237 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 ADAMTS10Q9H324 1103 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 POLIQ9UNA4 740 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 TRIM33Q9UPN9 1127 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 PHLPP2Q6ZVD8 1323 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 ADGRA3Q8IWK6 1321 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 CITO14578 2027 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 TTC3P53804 2025 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 A0A087WZ62 844 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 FRMD3A2A2Y4 597 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 K7ENM7 598 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 DLL1O00548 723 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 ICMTO60725 284 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 NBNO60934 754 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 SMNDC1O75940 238 aaKnown RBP eCLIP6.97□□□□□ -1.29
PRKDC-211ENST00000546304 ZNF202O95125 648 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 ABL1P00519 1130 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 CXCL10P02778 98 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 MYL1P05976 194 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 PFKMP08237 780 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 PLS3P13797 630 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 IDEP14735 1019 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 DARSP14868 501 aaKnown RBP6.97□□□□□ -1.29
PRKDC-211ENST00000546304 CSF2RAP15509 400 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 SFPQP23246 707 aaKnown RBP eCLIP6.97□□□□□ -1.29
PRKDC-211ENST00000546304 CASP1P29466 404 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 MAGEA10P43363 369 aaPredicted RBP6.97□□□□□ -1.29
PRKDC-211ENST00000546304 AFMP43652 599 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 NPTX2P47972 431 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 CRYBB1P53674 252 aaPredicted RBP6.97□□□□□ -1.29
PRKDC-211ENST00000546304 ATP11AP98196 1134 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 CDC42EP1Q00587 391 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 AMPD3Q01432 767 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 FPGSQ05932 587 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 EHHADHQ08426 723 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 PAK2Q13177 524 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 ZNF211Q13398 564 aaPredicted RBP6.97□□□□□ -1.29
PRKDC-211ENST00000546304 PPIGQ13427 754 aaKnown RBP eCLIP6.97□□□□□ -1.29
PRKDC-211ENST00000546304 SNW1Q13573 536 aaKnown RBP6.97□□□□□ -1.29
PRKDC-211ENST00000546304 GIT2Q14161 759 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 DOC2BQ14184 412 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 LPIN1Q14693 890 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 LONRF3Q496Y0 759 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 ODR4Q5SWX8 454 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 CNNM4Q6P4Q7 775 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 IGF2-ASQ6U949 168 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 SHISA2Q6UWI4 295 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 DYMQ7RTS9 669 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 SFR1Q86XK3 245 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 ZBTB8OSQ8IWT0 167 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 TMEM199Q8N511 208 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 DEPTORQ8TB45 409 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 BADQ92934 168 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 PMEPA1Q969W9 287 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 DNAJC19Q96DA6 116 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 LBHD1Q9BQE6 289 aaPredicted RBP6.97□□□□□ -1.29
PRKDC-211ENST00000546304 FDXACB1Q9BRP7 624 aaPredicted RBP6.97□□□□□ -1.29
PRKDC-211ENST00000546304 NFKBIZQ9BYH8 718 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 PBX4Q9BYU1 374 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 IFIH1Q9BYX4 1025 aaKnown RBP6.97□□□□□ -1.29
PRKDC-211ENST00000546304 GCOM2Q9BZD3 368 aaPredicted RBP6.97□□□□□ -1.29
PRKDC-211ENST00000546304 LRRC27Q9C0I9 530 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 ZHX3Q9H4I2 956 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 C17orf75Q9HAS0 396 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 PARVGQ9HBI0 331 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 LMBRD1Q9NUN5 540 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 DACT1Q9NYF0 836 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 LARSQ9P2J5 1176 aaKnown RBP6.97□□□□□ -1.29
PRKDC-211ENST00000546304 ARHGAP28Q9P2N2 729 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 SALL4Q9UJQ4 1053 aa6.97□□□□□ -1.29
PRKDC-211ENST00000546304 PDCD11Q14690 1871 aaKnown RBP6.96□□□□□ -1.29
PRKDC-211ENST00000546304 TRANK1O15050 2925 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 CCDC169A6NNP5 214 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 H0YGN5 161 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 INO80B-WBP1J3KQ70 363 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 ASAP2O43150 1006 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 RPS6KA5O75582 802 aa6.96□□□□□ -1.3
PRKDC-211ENST00000546304 ERLIN2O94905 339 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms