RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 CLTAP09496 248 aa12.88□□□□□ -0.35
LTBR-214ENST00000545445 NBL1P41271 181 aa12.88□□□□□ -0.35
LTBR-214ENST00000545445 ID4P47928 161 aa12.88□□□□□ -0.35
LTBR-214ENST00000545445 KLHL10Q6JEL2 608 aa12.88□□□□□ -0.35
LTBR-214ENST00000545445 FRMD5Q7Z6J6 570 aa12.88□□□□□ -0.35
LTBR-214ENST00000545445 CDR2LQ86X02 465 aaPredicted RBP12.88□□□□□ -0.35
LTBR-214ENST00000545445 CRIPAKQ8N1N5 446 aa12.88□□□□□ -0.35
LTBR-214ENST00000545445 XXYLT1Q8NBI6 393 aa12.88□□□□□ -0.35
LTBR-214ENST00000545445 KREMEN2Q8NCW0 462 aa12.88□□□□□ -0.35
LTBR-214ENST00000545445 EIF2AQ9BY44 585 aaKnown RBP12.88□□□□□ -0.35
LTBR-214ENST00000545445 TOPORSQ9NS56 1045 aaPredicted RBP12.88□□□□□ -0.35
LTBR-214ENST00000545445 DMAC2Q9NW81 257 aa12.88□□□□□ -0.35
LTBR-214ENST00000545445 HSPBP1Q9NZL4 362 aa12.88□□□□□ -0.35
LTBR-214ENST00000545445 LRFN2Q9ULH4 789 aa12.88□□□□□ -0.35
LTBR-214ENST00000545445 GIT1Q9Y2X7 761 aa12.88□□□□□ -0.35
LTBR-214ENST00000545445 IPPQ9Y573 584 aa12.88□□□□□ -0.35
LTBR-214ENST00000545445 PCDHB7Q9Y5E2 793 aa12.88□□□□□ -0.35
LTBR-214ENST00000545445 RIF1Q5UIP0 2472 aaKnown RBP12.87□□□□□ -0.35
LTBR-214ENST00000545445 CETN3O15182 167 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 MAPK13O15264 365 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 EXTL3O43909 919 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 NR3C1P04150 777 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 ITGA4P13612 1032 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 NR2F2P24468 414 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 NUBP1P53384 320 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 YARSP54577 528 aaKnown RBP12.87□□□□□ -0.35
LTBR-214ENST00000545445 ADAM9Q13443 819 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 DUSP6Q16828 381 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 ANKRD40Q6AI12 368 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 TTI2Q6NXR4 508 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 ZNF598Q86UK7 904 aaKnown RBP12.87□□□□□ -0.35
LTBR-214ENST00000545445 CD302Q8IX05 232 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 GPD1LQ8N335 351 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 SMG8Q8ND04 991 aaKnown RBP12.87□□□□□ -0.35
LTBR-214ENST00000545445 CEP63Q96MT8 703 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 ACAP3Q96P50 834 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 TSPAN18Q96SJ8 248 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 CBWD1Q9BRT8 395 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 FUCA2Q9BTY2 467 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 SMOC2Q9H3U7 446 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 PLEKHA5Q9HAU0 1116 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 CDH22Q9UJ99 828 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 CTNND2Q9UQB3 1225 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 FRMD4BQ9Y2L6 1034 aa12.87□□□□□ -0.35
LTBR-214ENST00000545445 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.87□□□□□ -0.35
LTBR-214ENST00000545445 GVINP1Q7Z2Y8 2422 aa12.86□□□□□ -0.35
LTBR-214ENST00000545445 ZNF233A6NK53 670 aa12.86□□□□□ -0.35
LTBR-214ENST00000545445 TISP43B9A030 160 aa12.86□□□□□ -0.35
LTBR-214ENST00000545445 CLIC2O15247 247 aa12.86□□□□□ -0.35
LTBR-214ENST00000545445 FAM189A1O60320 539 aa12.86□□□□□ -0.35
LTBR-214ENST00000545445 EXOC3O60645 756 aa12.86□□□□□ -0.35
LTBR-214ENST00000545445 HARSP12081 509 aaKnown RBP12.86□□□□□ -0.35
LTBR-214ENST00000545445 CYP2J2P51589 502 aa12.86□□□□□ -0.35
LTBR-214ENST00000545445 ENPEPQ07075 957 aa12.86□□□□□ -0.35
LTBR-214ENST00000545445 LLGL2Q6P1M3 1020 aa12.86□□□□□ -0.35
LTBR-214ENST00000545445 USP37Q86T82 979 aa12.86□□□□□ -0.35
LTBR-214ENST00000545445 ZC3H3Q8IXZ2 948 aaKnown RBP12.86□□□□□ -0.35
LTBR-214ENST00000545445 THNSL1Q8IYQ7 743 aa12.86□□□□□ -0.35
LTBR-214ENST00000545445 ENOX1Q8TC92 643 aaKnown RBP12.86□□□□□ -0.35
LTBR-214ENST00000545445 NOC3LQ8WTT2 800 aaKnown RBP12.86□□□□□ -0.35
LTBR-214ENST00000545445 NKD2Q969F2 451 aaPredicted RBP12.86□□□□□ -0.35
LTBR-214ENST00000545445 BPIFA3Q9BQP9 254 aa12.86□□□□□ -0.35
LTBR-214ENST00000545445 MKNK1Q9BUB5 465 aa12.86□□□□□ -0.35
LTBR-214ENST00000545445 HAPLN2Q9GZV7 340 aa12.86□□□□□ -0.35
LTBR-214ENST00000545445 S1PR5Q9H228 398 aa12.86□□□□□ -0.35
LTBR-214ENST00000545445 IKZF4Q9H2S9 585 aa12.86□□□□□ -0.35
LTBR-214ENST00000545445 NXF3Q9H4D5 531 aaKnown RBP12.86□□□□□ -0.35
LTBR-214ENST00000545445 PCIF1Q9H4Z3 704 aa12.86□□□□□ -0.35
LTBR-214ENST00000545445 RPF1Q9H9Y2 349 aaKnown RBP12.86□□□□□ -0.35
LTBR-214ENST00000545445 HCSTQ9UBK5 93 aa12.86□□□□□ -0.35
LTBR-214ENST00000545445 CPSF3Q9UKF6 684 aaKnown RBP12.86□□□□□ -0.35
LTBR-214ENST00000545445 TTC3P53804 2025 aa12.86□□□□□ -0.35
LTBR-214ENST00000545445 FAM186AA6NE01 2351 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 GNA14O95837 355 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 PMS1P54277 932 aaKnown RBP12.85□□□□□ -0.35
LTBR-214ENST00000545445 ZNF445P59923 1031 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 ERVFC1P60507 584 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 MTMR3Q13615 1198 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 SURF1Q15526 300 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 SNRNP35Q16560 246 aaKnown RBP12.85□□□□□ -0.35
LTBR-214ENST00000545445 TPD52L1Q16890 204 aaPredicted RBP12.85□□□□□ -0.35
LTBR-214ENST00000545445 SPOUT1Q5T280 376 aaKnown RBP12.85□□□□□ -0.35
LTBR-214ENST00000545445 PLPP4Q5VZY2 271 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 ANKRD54Q6NXT1 300 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 SYCE2Q6PIF2 218 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 LRSAM1Q6UWE0 723 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 GLB1LQ6UWU2 654 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 FILIP1Q7Z7B0 1213 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 ABI1Q8IZP0 508 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 CSGALNACT2Q8N6G5 542 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 CDCA3Q99618 268 aaPredicted RBP12.85□□□□□ -0.35
LTBR-214ENST00000545445 FAM213AQ9BRX8 229 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 DNAJC25Q9H1X3 360 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 ASB7Q9H672 318 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 RSAD1Q9HA92 442 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 SNTG2Q9NY99 539 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 KANSL3Q9P2N6 904 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 PARP2Q9UGN5 583 aa12.85□□□□□ -0.35
LTBR-214ENST00000545445 TRIM49BA6NDI0 452 aa12.84□□□□□ -0.35
LTBR-214ENST00000545445 SMTNL1A8MU46 457 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms