RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 PI4K2AQ9BTU6 479 aa14.84□□□□□ -0.03
SCARB1-209ENST00000545305 OSBPL7Q9BZF2 842 aa14.84□□□□□ -0.03
SCARB1-209ENST00000545305 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.84□□□□□ -0.037e-7■■■■■ 43.6
SCARB1-209ENST00000545305 UBQLN1Q9UMX0 589 aaKnown RBP14.84□□□□□ -0.03
SCARB1-209ENST00000545305 PLAGL2Q9UPG8 496 aa14.84□□□□□ -0.03
SCARB1-209ENST00000545305 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.84□□□□□ -0.03
SCARB1-209ENST00000545305 F8VZ95 297 aa14.83□□□□□ -0.04
SCARB1-209ENST00000545305 ITGB3P05106 788 aa14.83□□□□□ -0.04
SCARB1-209ENST00000545305 CLTBP09497 229 aa14.83□□□□□ -0.04
SCARB1-209ENST00000545305 CCDC172P0C7W6 258 aa14.83□□□□□ -0.04
SCARB1-209ENST00000545305 FERP16591 822 aa14.83□□□□□ -0.04
SCARB1-209ENST00000545305 TBXAS1P24557 533 aaPredicted RBP14.83□□□□□ -0.04
SCARB1-209ENST00000545305 JAM2P57087 298 aa14.83□□□□□ -0.04
SCARB1-209ENST00000545305 CDK17Q00537 523 aa14.83□□□□□ -0.04
SCARB1-209ENST00000545305 GCNT1Q02742 428 aa14.83□□□□□ -0.04
SCARB1-209ENST00000545305 DRAP1Q14919 205 aaPredicted RBP14.83□□□□□ -0.04
SCARB1-209ENST00000545305 ARHGAP44Q17R89 818 aa14.83□□□□□ -0.04
SCARB1-209ENST00000545305 SGSM1Q2NKQ1 1148 aa14.83□□□□□ -0.04
SCARB1-209ENST00000545305 TDRD12Q587J7 1177 aaKnown RBP14.83□□□□□ -0.04
SCARB1-209ENST00000545305 MRPL10Q7Z7H8 261 aaKnown RBP14.83□□□□□ -0.04
SCARB1-209ENST00000545305 TMEM139Q8IV31 216 aa14.83□□□□□ -0.04
SCARB1-209ENST00000545305 TAF4BQ92750 862 aa14.83□□□□□ -0.04
SCARB1-209ENST00000545305 APBB2Q92870 758 aa14.83□□□□□ -0.04
SCARB1-209ENST00000545305 PPP1R12CQ9BZL4 782 aa14.83□□□□□ -0.04
SCARB1-209ENST00000545305 UBN1Q9NPG3 1134 aa14.83□□□□□ -0.04
SCARB1-209ENST00000545305 TMEM39AQ9NV64 488 aa14.83□□□□□ -0.04
SCARB1-209ENST00000545305 DPP3Q9NY33 737 aa14.83□□□□□ -0.04
SCARB1-209ENST00000545305 KLK14Q9P0G3 267 aa14.83□□□□□ -0.04
SCARB1-209ENST00000545305 AJAP1Q9UKB5 411 aaPredicted RBP14.83□□□□□ -0.04
SCARB1-209ENST00000545305 GIT1Q9Y2X7 761 aa14.83□□□□□ -0.04
SCARB1-209ENST00000545305 A0A0U1RQF3 1178 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 ZNF623O75123 536 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 LRRN2O75325 713 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 ASS1P00966 412 aaKnown RBP14.82□□□□□ -0.04
SCARB1-209ENST00000545305 SERPING1P05155 500 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 KCNE1P15382 129 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 IBSPP21815 317 aaPredicted RBP14.82□□□□□ -0.04
SCARB1-209ENST00000545305 ATICP31939 592 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 CYLC1P35663 651 aaPredicted RBP14.82□□□□□ -0.04
SCARB1-209ENST00000545305 SOX5P35711 763 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 KCNJ6P48051 423 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 MYL6P60660 151 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 RBP5P82980 135 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 LRRC26Q2I0M4 334 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 XKR4Q5GH76 650 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 GLRA4Q5JXX5 417 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 ALKAL1Q6UXT8 129 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 C1orf127Q8N9H9 656 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 RNF169Q8NCN4 708 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 HELQQ8TDG4 1101 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 NIF3L1Q9GZT8 377 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 RNF39Q9H2S5 420 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 DEF6Q9H4E7 631 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 RGS18Q9NS28 235 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 SLC38A7Q9NVC3 462 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 AIPL1Q9NZN9 384 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 TBX21Q9UL17 535 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 PYCARDQ9ULZ3 195 aa14.82□□□□□ -0.04
SCARB1-209ENST00000545305 PDCD11Q14690 1871 aaKnown RBP14.81□□□□□ -0.04
SCARB1-209ENST00000545305 SMIM28A0A1B0GU29 152 aa14.81□□□□□ -0.04
SCARB1-209ENST00000545305 SOWAHDA6NJG2 315 aa14.81□□□□□ -0.04
SCARB1-209ENST00000545305 NBNO60934 754 aa14.81□□□□□ -0.04
SCARB1-209ENST00000545305 GFPT2O94808 682 aa14.81□□□□□ -0.04
SCARB1-209ENST00000545305 P4HA1P13674 534 aa14.81□□□□□ -0.04
SCARB1-209ENST00000545305 POLR2BP30876 1174 aaKnown RBP14.81□□□□□ -0.04
SCARB1-209ENST00000545305 CCL23P55773 120 aa14.81□□□□□ -0.04
SCARB1-209ENST00000545305 ARID5AQ03989 594 aa14.81□□□□□ -0.04
SCARB1-209ENST00000545305 KLHL30Q0D2K2 578 aa14.81□□□□□ -0.04
SCARB1-209ENST00000545305 PLEKHG4Q58EX7 1191 aa14.81□□□□□ -0.04
SCARB1-209ENST00000545305 E4F1Q66K89 784 aaPredicted RBP14.81□□□□□ -0.04
SCARB1-209ENST00000545305 WDR59Q6PJI9 974 aa14.81□□□□□ -0.04
SCARB1-209ENST00000545305 SLC24A5Q71RS6 500 aa14.81□□□□□ -0.04
SCARB1-209ENST00000545305 ECHDC2Q86YB7 292 aa14.81□□□□□ -0.04
SCARB1-209ENST00000545305 TATDN2Q93075 761 aa14.81□□□□□ -0.04
SCARB1-209ENST00000545305 TSPYL2Q9H2G4 693 aaPredicted RBP14.81□□□□□ -0.04
SCARB1-209ENST00000545305 RSAD1Q9HA92 442 aa14.81□□□□□ -0.04
SCARB1-209ENST00000545305 SIX4Q9UIU6 781 aa14.81□□□□□ -0.04
SCARB1-209ENST00000545305 AGAP1Q9UPQ3 857 aa14.81□□□□□ -0.04
SCARB1-209ENST00000545305 BZW2Q9Y6E2 419 aaKnown RBP14.81□□□□□ -0.04
SCARB1-209ENST00000545305 UMODL1Q5DID0 1318 aa14.81□□□□□ -0.04
SCARB1-209ENST00000545305 CCP110O43303 1012 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 OFD1O75665 1012 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 IPO7O95373 1038 aaKnown RBP14.8□□□□□ -0.04
SCARB1-209ENST00000545305 CST3P01034 146 aaPredicted RBP14.8□□□□□ -0.04
SCARB1-209ENST00000545305 ATF7P17544 494 aaPredicted RBP14.8□□□□□ -0.04
SCARB1-209ENST00000545305 CYP3A5P20815 502 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 CYP2C18P33260 490 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 RFC2P35250 354 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 MLH1P40692 756 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 USP8P40818 1118 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 YWHAEP62258 255 aaKnown RBP14.8□□□□□ -0.04
SCARB1-209ENST00000545305 MYO1EQ12965 1108 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 CUL2Q13617 745 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 ZNF667Q5HYK9 610 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 SPOPLQ6IQ16 392 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 GPIHBP1Q8IV16 184 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 CCDC170Q8IYT3 715 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 SHC3Q92529 594 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 LPPQ93052 612 aa14.8□□□□□ -0.04
SCARB1-209ENST00000545305 JAKMIP2Q96AA8 810 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms