RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 FGFR3P22607 806 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 DNM1Q05193 864 aaKnown RBP12.85□□□□□ -0.35
HDAC4-216ENST00000544989 PKP1Q13835 747 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 FOXD4L6Q3SYB3 417 aaPredicted RBP12.85□□□□□ -0.35
HDAC4-216ENST00000544989 RTP2Q5QGT7 225 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 RESP18Q5W5W9 173 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 ADALQ6DHV7 355 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 SHC4Q6S5L8 630 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 FOXD4L3Q6VB84 417 aaPredicted RBP12.85□□□□□ -0.35
HDAC4-216ENST00000544989 GPR149Q86SP6 731 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 CEP57Q86XR8 500 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 CEP57L1Q8IYX8 460 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 SYCP3Q8IZU3 236 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 PLCD3Q8N3E9 789 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 APPL2Q8NEU8 664 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 BEST2Q8NFU1 509 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 HASPINQ8TF76 798 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 POMGNT1Q8WZA1 660 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 RABGGTAQ92696 567 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 STAMQ92783 540 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 DHX58Q96C10 678 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 KIF12Q96FN5 646 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 ZMAT2Q96NC0 199 aaKnown RBP12.85□□□□□ -0.35
HDAC4-216ENST00000544989 OXCT2Q9BYC2 517 aaPredicted RBP12.85□□□□□ -0.35
HDAC4-216ENST00000544989 TRIM9Q9C026 710 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 ASB7Q9H672 318 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 MAN1C1Q9NR34 630 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 USP25Q9UHP3 1055 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 AGO2Q9UKV8 859 aaKnown RBP12.85□□□□□ -0.35
HDAC4-216ENST00000544989 USTQ9Y2C2 406 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 BACE2Q9Y5Z0 518 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 POLR2DO15514 142 aaKnown RBP12.84□□□□□ -0.35
HDAC4-216ENST00000544989 TGM5O43548 720 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 FAM189A1O60320 539 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 IL18RAPO95256 599 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 PAPLNO95428 1278 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 GARTP22102 1010 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 LRPAP1P30533 357 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 ASIC1P78348 528 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 SOX4Q06945 474 aaPredicted RBP12.84□□□□□ -0.35
HDAC4-216ENST00000544989 ENOX2Q16206 610 aaKnown RBP12.84□□□□□ -0.35
HDAC4-216ENST00000544989 ZC2HC1CQ53FD0 456 aaPredicted RBP12.84□□□□□ -0.35
HDAC4-216ENST00000544989 LIN9Q5TKA1 542 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 NT5DC4Q86YG4 428 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 LNX1Q8TBB1 728 aaPredicted RBP12.84□□□□□ -0.35
HDAC4-216ENST00000544989 ACSF2Q96CM8 615 aaPredicted RBP12.84□□□□□ -0.35
HDAC4-216ENST00000544989 RPGRIP1Q96KN7 1286 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 SPATA32Q96LK8 384 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 C7orf25Q9BPX7 421 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 APOL5Q9BWW9 433 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 HAPLN2Q9GZV7 340 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 CXCL16Q9H2A7 254 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 GOLGA2P5Q9HBQ8 144 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 CD320Q9NPF0 282 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 MTRRQ9UBK8 725 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 CACNG4Q9UBN1 327 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 CPSF3Q9UKF6 684 aaKnown RBP12.84□□□□□ -0.35
HDAC4-216ENST00000544989 KCNH3Q9ULD8 1083 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 C2CD2Q9Y426 696 aa12.84□□□□□ -0.35
HDAC4-216ENST00000544989 TRIP11Q15643 1979 aa12.83□□□□□ -0.35
HDAC4-216ENST00000544989 C5orf42Q9H799 3197 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 PVALEFA0A1B0GWK0 134 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 LACTBL1A8MY62 500 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 PRR33A8MZF0 331 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 EIF3DO15371 548 aaKnown RBP eCLIP12.83□□□□□ -0.361e-6■■□□□ 13.9
HDAC4-216ENST00000544989 MYL1P05976 194 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 HNRNPA1P09651 372 aaKnown RBP eCLIP12.83□□□□□ -0.36
HDAC4-216ENST00000544989 CMA1P23946 247 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 MCM4P33991 863 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 TMEM132DQ14C87 1099 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 ZBTB6Q15916 424 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 UVSSAQ2YD98 709 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 SEZ6Q53EL9 994 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 SLC39A4Q6P5W5 647 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 LILRA6Q6PI73 481 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 PRSS55Q6UWB4 352 aaPredicted RBP12.83□□□□□ -0.36
HDAC4-216ENST00000544989 TMC5Q6UXY8 1006 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 CCDC149Q6ZUS6 474 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 OTOP3Q7RTS5 596 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 PALB2Q86YC2 1186 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 RNF135Q8IUD6 432 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 KREMEN2Q8NCW0 462 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 C18orf25Q96B23 403 aaPredicted RBP12.83□□□□□ -0.36
HDAC4-216ENST00000544989 SUSD3Q96L08 255 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 B3GALT6Q96L58 329 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 CLSTN3Q9BQT9 956 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 KCNH6Q9H252 994 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 TBC1D7Q9P0N9 293 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 MAFFQ9ULX9 164 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 UBE4BO95155 1302 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 ZDBF2Q9HCK1 2354 aa12.83□□□□□ -0.36
HDAC4-216ENST00000544989 CACNA1AO00555 2505 aa12.82□□□□□ -0.36
HDAC4-216ENST00000544989 CCDC195A0A1B0GUA6 201 aa12.82□□□□□ -0.36
HDAC4-216ENST00000544989 ANKRD63C9JTQ0 380 aa12.82□□□□□ -0.36
HDAC4-216ENST00000544989 XYLBO75191 536 aa12.82□□□□□ -0.36
HDAC4-216ENST00000544989 POU2F2P09086 479 aa12.82□□□□□ -0.36
HDAC4-216ENST00000544989 SLFN14P0C7P3 912 aa12.82□□□□□ -0.36
HDAC4-216ENST00000544989 TKTP29401 623 aaKnown RBP12.82□□□□□ -0.36
HDAC4-216ENST00000544989 HOXA9P31269 272 aa12.82□□□□□ -0.36
HDAC4-216ENST00000544989 TNFSF9P41273 254 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms