RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 PIN4Q9Y237 131 aaKnown RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 FHOD1Q9Y613 1164 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 MROH7Q68CQ1 1323 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 COL4A6Q14031 1691 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 EIF3CLB5ME19 914 aaKnown RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 PITPNM1O00562 1244 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 P4HA2O15460 535 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 PQBP1O60828 265 aaKnown RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 TADA3O75528 432 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 LDHAP00338 332 aaKnown RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 TFRCP02786 760 aaKnown RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 CLTAP09496 248 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 DLATP10515 647 aaKnown RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 MCM3P25205 808 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 GTF2H1P32780 548 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 MXI1P50539 228 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 AFF1P51825 1210 aaKnown RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 ATN1P54259 1190 aaPredicted RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 JAM2P57087 298 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 SPA17Q15506 151 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 ELF2Q15723 593 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 ZBTB6Q15916 424 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 LRRC26Q2I0M4 334 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 DCAF4L1Q3SXM0 396 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 PHLDB3Q6NSJ2 640 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 TMCO3Q6UWJ1 677 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 ZNF598Q86UK7 904 aaKnown RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 GSTCDQ8NEC7 633 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 SYN2Q92777 582 aaPredicted RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 SNX27Q96L92 541 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 PCMTD1Q96MG8 357 aaPredicted RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 WDR24Q96S15 920 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 EIF3CQ99613 913 aaKnown RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 TCHPQ9BT92 498 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 LSM14BQ9BX40 385 aaKnown RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 CARD6Q9BX69 1037 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 APOBEC3GQ9HC16 384 aaKnown RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 TMEM8AQ9HCN3 771 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 LUC7LQ9NQ29 371 aaKnown RBP7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 LZTFL1Q9NQ48 299 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 GCNT4Q9P109 453 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 PLAGL2Q9UPG8 496 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 SQORQ9Y6N5 450 aa7.56□□□□□ -1.2
HMGCS2-204ENST00000544913 LACTBL1A8MY62 500 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 RPS6KA5O75582 802 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 KRT13P13646 458 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 UCHL3P15374 230 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 SELPP16109 830 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 ITGB8P26012 769 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 EXOC3L4Q17RC7 722 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 ZNF569Q5MCW4 686 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 KRT39Q6A163 491 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 IQCEQ6IPM2 695 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 LRRC8DQ7L1W4 858 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 RSRC2Q7L4I2 434 aaKnown RBP7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 WDR49Q8IV35 697 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 ARHGEF19Q8IW93 802 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 KRT222Q8N1A0 295 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 CRIPAKQ8N1N5 446 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 CAGE1Q8TC20 777 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 HELQQ8TDG4 1101 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 KAT5Q92993 513 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 PAWRQ96IZ0 340 aaKnown RBP7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 KREMEN1Q96MU8 473 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 DESI2Q9BSY9 194 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 MTMR12Q9C0I1 747 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 XYLT2Q9H1B5 865 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 MMRN2Q9H8L6 949 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 SNTG2Q9NY99 539 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 CNTN3Q9P232 1028 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 FBXL5Q9UKA1 691 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 IPPQ9Y573 584 aa7.55□□□□□ -1.2
HMGCS2-204ENST00000544913 ANO9A1A5B4 782 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 M0QZ92 97 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 PTGESO14684 152 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 RECQL4O94761 1208 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 HLA-DRAP01903 254 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 AKAP5P24588 427 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 MATR3P43243 847 aaKnown RBP eCLIP7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 GUCY2FP51841 1108 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 SOX4Q06945 474 aaPredicted RBP7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 MTF1Q14872 753 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 BRD3Q15059 726 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 NAB2Q15742 525 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 JADE1Q6IE81 842 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 PDXDC1Q6P996 788 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 GBP6Q6ZN66 633 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 MRPL10Q7Z7H8 261 aaKnown RBP7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 C1orf127Q8N9H9 656 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 CCDC42Q96M95 316 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 PI4K2AQ9BTU6 479 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 RNF19AQ9NV58 838 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 CEP72Q9P209 647 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 NOD1Q9Y239 953 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 PCDHB2Q9Y5E7 798 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 RANBP2P49792 3224 aaKnown RBP7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 SCN1AP35498 2009 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 SSU72P8A0A1W2PR75 194 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 CCDC151A5D8V7 595 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 C9IYK1 514 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms