RNA–Protein interactions for RNA: ENST00000544382.5

CLPB-213, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, human

TSL 5

Gene CLPB, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPB-213	ENST00000544382	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.75	□□□□□ -0.21
CLPB-213	ENST00000544382	AGO2	Q9UKV8	859 aa	Known RBP	13.75	□□□□□ -0.21
CLPB-213	ENST00000544382	KCNH3	Q9ULD8	1083 aa		13.75	□□□□□ -0.21
CLPB-213	ENST00000544382	UBQLN1	Q9UMX0	589 aa	Known RBP	13.75	□□□□□ -0.21
CLPB-213	ENST00000544382	LACTBL1	A8MY62	500 aa		13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	LOC730098	B7Z3J9	87 aa		13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	FGFR3	P22607	806 aa		13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	MCM4	P33991	863 aa		13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	TNFSF9	P41273	254 aa		13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	SOX4	Q06945	474 aa	Predicted RBP	13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	ENOX2	Q16206	610 aa	Known RBP	13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	LIN9	Q5TKA1	542 aa		13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	CNNM4	Q6P4Q7	775 aa		13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	SLC39A4	Q6P5W5	647 aa		13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	TMC5	Q6UXY8	1006 aa		13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	C15orf39	Q6ZRI6	1047 aa		13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	PALB2	Q86YC2	1186 aa		13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	GLYCTK	Q8IVS8	523 aa		13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	C12orf76	Q8N812	135 aa	Predicted RBP	13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	BEST2	Q8NFU1	509 aa		13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	CMAS	Q8NFW8	434 aa	Predicted RBP	13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	LEO1	Q8WVC0	666 aa	Predicted RBP	13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	STAM	Q92783	540 aa		13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	C7orf25	Q9BPX7	421 aa		13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	CD320	Q9NPF0	282 aa		13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	TSHZ2	Q9NRE2	1034 aa		13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	USP25	Q9UHP3	1055 aa		13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	CPSF3	Q9UKF6	684 aa	Known RBP	13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	DERA	Q9Y315	318 aa		13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	STYXL1	Q9Y6J8	313 aa		13.74	□□□□□ -0.21
CLPB-213	ENST00000544382	ANKRD63	C9JTQ0	380 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	PI4K2B	G5E9Z4	385 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382		H7C4K7	107 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	SYN3	O14994	580 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	TGM5	O43548	720 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	DCX	O43602	365 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	FAM189A1	O60320	539 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	LDHA	P00338	332 aa	Known RBP	13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	MYB	P10242	640 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	RPL17	P18621	184 aa	Known RBP	13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	GART	P22102	1010 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	PAX3	P23760	479 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	LRPAP1	P30533	357 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	ACOT2	P49753	483 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	TMEM132D	Q14C87	1099 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	GPR149	Q86SP6	731 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	APPL2	Q8NEU8	664 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	LNX1	Q8TBB1	728 aa	Predicted RBP	13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	STRA6	Q9BX79	667 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	POMK	Q9H5K3	350 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	ASB7	Q9H672	318 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	ZDHHC7	Q9NXF8	308 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	MTRR	Q9UBK8	725 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	TUBGCP4	Q9UGJ1	667 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	BACE2	Q9Y5Z0	518 aa		13.73	□□□□□ -0.21
CLPB-213	ENST00000544382	C2orf16	Q68DN1	1984 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	ANK1	P16157	1881 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	CCDC195	A0A1B0GUA6	201 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	ARHGEF37	A1IGU5	675 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	KIAA0391	O15091	583 aa	Known RBP	13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	EIF3D	O15371	548 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	MEFV	O15553	781 aa	Predicted RBP	13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	IL18RAP	O95256	599 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	ADRB2	P07550	413 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	CMA1	P23946	247 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	TKT	P29401	623 aa	Known RBP	13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	BRCC3	P46736	316 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	CASP5	P51878	434 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	NUCB2	P80303	420 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	SPAG1	Q07617	926 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	FAM26F	Q5R3K3	315 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	ZBTB41	Q5SVQ8	909 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	CCDC149	Q6ZUS6	474 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	UNC13D	Q70J99	1090 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	RNF135	Q8IUD6	432 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	TDRD5	Q8NAT2	981 aa	Known RBP	13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	KREMEN2	Q8NCW0	462 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	C3orf58	Q8NDZ4	430 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	SUSD3	Q96L08	255 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	CLSTN3	Q9BQT9	956 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	RHOBTB2	Q9BYZ6	727 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	PIDD1	Q9HB75	910 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	ZDHHC9	Q9Y397	364 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	C2CD2	Q9Y426	696 aa		13.72	□□□□□ -0.21
CLPB-213	ENST00000544382	UBE4B	O95155	1302 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	TISP43	B9A030	160 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382		I3L4J1	428 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	WEE2	P0C1S8	567 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	SLFN14	P0C7P3	912 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	SPATA31D3	P0C874	917 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	COL9A1	P20849	921 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	OR1D2	P34982	312 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	RAB33A	Q14088	237 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	ZBTB6	Q15916	424 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	VARS2	Q5ST30	1063 aa	Known RBP	13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	SPATA1	Q5VX52	437 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	JADE1	Q6IE81	842 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	ARMCX5	Q6P1M9	558 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	LILRA6	Q6PI73	481 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms