RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 EXOSC9Q06265 439 aaKnown RBP4.55□□□□□ -1.68
SCFD1-207ENST00000544052 ZNF543Q08ER8 600 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 MESP2Q0VG99 397 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 TRIM14Q14142 442 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 CNGA2Q16280 664 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 INO80DQ53TQ3 878 aaPredicted RBP4.55□□□□□ -1.68
SCFD1-207ENST00000544052 LCE4AQ5TA78 99 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 KLHDC7AQ5VTJ3 777 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 ATG14Q6ZNE5 492 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 ZNF572Q7Z3I7 529 aaPredicted RBP4.55□□□□□ -1.68
SCFD1-207ENST00000544052 DEPTORQ8TB45 409 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 SLC35B2Q8TB61 432 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 CDC5LQ99459 802 aaKnown RBP4.55□□□□□ -1.68
SCFD1-207ENST00000544052 BTBD1Q9H0C5 482 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 SLC6A15Q9H2J7 730 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 WDCPQ9H6R7 721 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 CERS4Q9HA82 394 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 SLAMF7Q9NQ25 335 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 CNOT6Q9ULM6 557 aaKnown RBP4.55□□□□□ -1.68
SCFD1-207ENST00000544052 SNAPC4Q5SXM2 1469 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 SH3D21A4FU49 640 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 PIP5K1CO60331 668 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 SASH1O94885 1247 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 IL6STP40189 918 aaPredicted RBP4.55□□□□□ -1.68
SCFD1-207ENST00000544052 STT3AP46977 705 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 FLT3LGP49771 235 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 SOX8P57073 446 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 APBA1Q02410 837 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 ANO1Q5XXA6 986 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 DPP9Q86TI2 863 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 PLXDC1Q8IUK5 500 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 CARFQ8N187 725 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 KLHL36Q8N4N3 616 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 BRIX1Q8TDN6 353 aaKnown RBP4.55□□□□□ -1.68
SCFD1-207ENST00000544052 ADAMTS17Q8TE56 1095 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 CASKIN2Q8WXE0 1202 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 MBD6Q96DN6 1003 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 KCNH6Q9H252 994 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 VPS11Q9H270 941 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 PIH1D1Q9NWS0 290 aaKnown RBP4.55□□□□□ -1.68
SCFD1-207ENST00000544052 KCTD3Q9Y597 815 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 BIVM-ERCC5R4GMW8 1640 aa4.55□□□□□ -1.68
SCFD1-207ENST00000544052 SYNJ1O43426 1573 aa4.54□□□□□ -1.68
SCFD1-207ENST00000544052 TDRD9Q8NDG6 1382 aaKnown RBP4.54□□□□□ -1.68
SCFD1-207ENST00000544052 CCDC189A1A4V9 331 aa4.54□□□□□ -1.68
SCFD1-207ENST00000544052 KLRG2A4D1S0 409 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-207ENST00000544052 PRSS29PA6NIE9 313 aa4.54□□□□□ -1.68
SCFD1-207ENST00000544052 GRM6O15303 877 aa4.54□□□□□ -1.68
SCFD1-207ENST00000544052 MTSS1O43312 755 aa4.54□□□□□ -1.68
SCFD1-207ENST00000544052 STC2O76061 302 aa4.54□□□□□ -1.68
SCFD1-207ENST00000544052 MATN4O95460 622 aa4.54□□□□□ -1.68
SCFD1-207ENST00000544052 IL2RBP14784 551 aa4.54□□□□□ -1.68
SCFD1-207ENST00000544052 TSHRP16473 764 aa4.54□□□□□ -1.68
SCFD1-207ENST00000544052 ZMAT1Q5H9K5 638 aa4.54□□□□□ -1.68
SCFD1-207ENST00000544052 C3orf38Q5JPI3 329 aa4.54□□□□□ -1.68
SCFD1-207ENST00000544052 HIBCHQ6NVY1 386 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-207ENST00000544052 CMTM4Q8IZR5 234 aa4.54□□□□□ -1.68
SCFD1-207ENST00000544052 CCDC33Q8N5R6 958 aa4.54□□□□□ -1.68
SCFD1-207ENST00000544052 PCSK9Q8NBP7 692 aaKnown RBP4.54□□□□□ -1.68
SCFD1-207ENST00000544052 LPPQ93052 612 aa4.54□□□□□ -1.68
SCFD1-207ENST00000544052 C11orf54Q9H0W9 315 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-207ENST00000544052 ADAM7Q9H2U9 754 aa4.54□□□□□ -1.68
SCFD1-207ENST00000544052 SACM1LQ9NTJ5 587 aa4.54□□□□□ -1.68
SCFD1-207ENST00000544052 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.54□□□□□ -1.68
SCFD1-207ENST00000544052 SOGA1O94964 1423 aa4.54□□□□□ -1.68
SCFD1-207ENST00000544052 TCRBV7S2A1N4TA0A589 114 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 FTH1P19P0C7X4 201 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 MED14OSP0DP75 135 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 SLC6A4P31645 630 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 PIK3CGP48736 1102 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 SP140Q13342 867 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 ZRSR2Q15696 482 aaKnown RBP4.53□□□□□ -1.68
SCFD1-207ENST00000544052 CCDC93Q567U6 631 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 FAM47AQ5JRC9 791 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 UBE3BQ7Z3V4 1068 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 ADGRE4PQ86SQ3 457 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 ZNF761Q86XN6 746 aaPredicted RBP4.53□□□□□ -1.68
SCFD1-207ENST00000544052 RNF152Q8N8N0 203 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 CFHR4Q92496 578 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 WDR12Q9GZL7 423 aaKnown RBP4.53□□□□□ -1.68
SCFD1-207ENST00000544052 CNNM1Q9NRU3 951 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 GJB4Q9NTQ9 266 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 TRMT13Q9NUP7 481 aaKnown RBP4.53□□□□□ -1.68
SCFD1-207ENST00000544052 MOCS1Q9NZB8 636 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 COL20A1Q9P218 1284 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 SMG5Q9UPR3 1016 aaKnown RBP4.53□□□□□ -1.68
SCFD1-207ENST00000544052 NR2E1Q9Y466 385 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 PCDHGB2Q9Y5G2 931 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 ERCC6L2Q5T890 1561 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 PNPLA7Q6ZV29 1317 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 ISM1B1AKI9 464 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 MATN2O00339 956 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 KIAA0391O15091 583 aaKnown RBP4.53□□□□□ -1.68
SCFD1-207ENST00000544052 ARHGAP6O43182 974 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 B4GALT4O60513 344 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 C1QTNF9P0C862 333 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 PAX3P23760 479 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 PPM1AP35813 382 aa4.53□□□□□ -1.68
SCFD1-207ENST00000544052 HALP42357 657 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms