RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 PYGBP11216 843 aa20.43■□□□□ 0.86
SUDS3-204ENST00000543473 FNTAP49354 379 aa20.43■□□□□ 0.86
SUDS3-204ENST00000543473 MORF4L2Q15014 288 aa20.43■□□□□ 0.86
SUDS3-204ENST00000543473 PRPF31Q8WWY3 499 aaKnown RBP20.43■□□□□ 0.86
SUDS3-204ENST00000543473 TRIM15Q9C019 465 aa20.43■□□□□ 0.86
SUDS3-204ENST00000543473 PDP2Q9P2J9 529 aa20.43■□□□□ 0.86
SUDS3-204ENST00000543473 CHORDC1Q9UHD1 332 aaPredicted RBP20.43■□□□□ 0.86
SUDS3-204ENST00000543473 PHTF1Q9UMS5 762 aa20.43■□□□□ 0.86
SUDS3-204ENST00000543473 PSMC1P62191 440 aaKnown RBP20.43■□□□□ 0.86
SUDS3-204ENST00000543473 KCNMA1Q12791 1236 aa20.43■□□□□ 0.86
SUDS3-204ENST00000543473 COL5A2P05997 1499 aaPredicted RBP20.43■□□□□ 0.86
SUDS3-204ENST00000543473 TYK2P29597 1187 aa20.43■□□□□ 0.86
SUDS3-204ENST00000543473 CNGA1P29973 690 aa20.43■□□□□ 0.86
SUDS3-204ENST00000543473 BCAR1P56945 870 aa20.43■□□□□ 0.86
SUDS3-204ENST00000543473 CATSPER1Q8NEC5 780 aa20.43■□□□□ 0.86
SUDS3-204ENST00000543473 KRT82Q9NSB4 513 aa20.43■□□□□ 0.86
SUDS3-204ENST00000543473 FLT1P17948 1338 aa20.43■□□□□ 0.86
SUDS3-204ENST00000543473 MAGEA13PA6NCF6 341 aa20.43■□□□□ 0.86
SUDS3-204ENST00000543473 H3BRJ5 948 aa20.43■□□□□ 0.86
SUDS3-204ENST00000543473 PAX7P23759 505 aa20.43■□□□□ 0.86
SUDS3-204ENST00000543473 RCOR2Q8IZ40 523 aa20.43■□□□□ 0.86
SUDS3-204ENST00000543473 GFM2Q969S9 779 aaKnown RBP20.43■□□□□ 0.86
SUDS3-204ENST00000543473 L3MBTL1Q9Y468 752 aa20.43■□□□□ 0.86
SUDS3-204ENST00000543473 CCND2P30279 289 aa20.42■□□□□ 0.86
SUDS3-204ENST00000543473 THNSL1Q8IYQ7 743 aa20.42■□□□□ 0.86
SUDS3-204ENST00000543473 ZMAT2Q96NC0 199 aaKnown RBP20.42■□□□□ 0.86
SUDS3-204ENST00000543473 ZNF844Q08AG5 666 aa20.42■□□□□ 0.86
SUDS3-204ENST00000543473 SPP2Q13103 211 aa20.42■□□□□ 0.86
SUDS3-204ENST00000543473 ZKSCAN4Q969J2 545 aaPredicted RBP20.42■□□□□ 0.86
SUDS3-204ENST00000543473 ING2Q9H160 280 aa20.42■□□□□ 0.86
SUDS3-204ENST00000543473 PFDN6O15212 129 aa20.42■□□□□ 0.86
SUDS3-204ENST00000543473 ASAP2O43150 1006 aa20.42■□□□□ 0.86
SUDS3-204ENST00000543473 KLRK1P26718 216 aa20.42■□□□□ 0.86
SUDS3-204ENST00000543473 CPA2P48052 419 aa20.42■□□□□ 0.86
SUDS3-204ENST00000543473 CCNYL1Q8N7R7 359 aa20.42■□□□□ 0.86
SUDS3-204ENST00000543473 CPA5Q8WXQ8 436 aa20.42■□□□□ 0.86
SUDS3-204ENST00000543473 ZSWIM1Q9BR11 485 aa20.42■□□□□ 0.86
SUDS3-204ENST00000543473 NACA2Q9H009 215 aa20.42■□□□□ 0.86
SUDS3-204ENST00000543473 TBC1D22BQ9NU19 505 aa20.42■□□□□ 0.86
SUDS3-204ENST00000543473 LRRC10BA6NIK2 292 aa20.42■□□□□ 0.86
SUDS3-204ENST00000543473 SSTR3P32745 418 aaPredicted RBP20.42■□□□□ 0.86
SUDS3-204ENST00000543473 SLC12A1Q13621 1099 aa20.42■□□□□ 0.86
SUDS3-204ENST00000543473 TUFT1Q9NNX1 390 aa20.42■□□□□ 0.86
SUDS3-204ENST00000543473 PDE2AO00408 941 aaPredicted RBP20.41■□□□□ 0.86
SUDS3-204ENST00000543473 SRGAP2CP0DJJ0 459 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 ERVK-9P63128 1117 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 STX3Q13277 289 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 GRB10Q13322 594 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 EPHA7Q15375 998 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 KIF19Q2TAC6 998 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 BEGAINQ9BUH8 593 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 DCLRE1BQ9H816 532 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 ZNRF3Q9ULT6 936 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 TULP2O00295 520 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 TTMPQ5BVD1 217 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 MKNK1Q9BUB5 465 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 ZC2HC1CQ53FD0 456 aaPredicted RBP20.41■□□□□ 0.86
SUDS3-204ENST00000543473 C3orf62Q6ZUJ4 267 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 NLRP9Q7RTR0 991 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 ATP6V1E2Q96A05 226 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 MAGEB18Q96M61 343 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 MANSC1Q9H8J5 431 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 INPP5FQ9Y2H2 1132 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 PON1P27169 355 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 EIF3EP60228 445 aaKnown RBP20.41■□□□□ 0.86
SUDS3-204ENST00000543473 KLC3Q6P597 504 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 SLC10A4Q96EP9 437 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 RPF1Q9H9Y2 349 aaKnown RBP20.41■□□□□ 0.86
SUDS3-204ENST00000543473 PAPOLBQ9NRJ5 636 aaKnown RBP20.41■□□□□ 0.86
SUDS3-204ENST00000543473 MTMR4Q9NYA4 1195 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 GTSE1Q9NYZ3 720 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 HSPBP1Q9NZL4 362 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 C15orf41Q9Y2V0 281 aa20.41■□□□□ 0.86
SUDS3-204ENST00000543473 GSTA4O15217 222 aa20.4■□□□□ 0.86
SUDS3-204ENST00000543473 GNAT1P11488 350 aa20.4■□□□□ 0.86
SUDS3-204ENST00000543473 GYS1P13807 737 aa20.4■□□□□ 0.86
SUDS3-204ENST00000543473 BMP6P22004 513 aa20.4■□□□□ 0.86
SUDS3-204ENST00000543473 ZNF543Q08ER8 600 aa20.4■□□□□ 0.86
SUDS3-204ENST00000543473 KPNB1Q14974 876 aaKnown RBP20.4■□□□□ 0.86
SUDS3-204ENST00000543473 ZNF699Q32M78 642 aa20.4■□□□□ 0.86
SUDS3-204ENST00000543473 VPS39Q96JC1 886 aa20.4■□□□□ 0.86
SUDS3-204ENST00000543473 APOL6Q9BWW8 343 aa20.4■□□□□ 0.86
SUDS3-204ENST00000543473 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.4■□□□□ 0.86
SUDS3-204ENST00000543473 R3HDM1Q15032 1099 aaKnown RBP20.4■□□□□ 0.86
SUDS3-204ENST00000543473 MEA1Q16626 185 aa20.4■□□□□ 0.86
SUDS3-204ENST00000543473 YTHDF3Q7Z739 585 aaKnown RBP20.4■□□□□ 0.86
SUDS3-204ENST00000543473 AGR3Q8TD06 166 aa20.4■□□□□ 0.86
SUDS3-204ENST00000543473 RNF181Q9P0P0 153 aa20.4■□□□□ 0.86
SUDS3-204ENST00000543473 HERC5Q9UII4 1024 aaKnown RBP20.4■□□□□ 0.86
SUDS3-204ENST00000543473 WDR46O15213 610 aaKnown RBP20.4■□□□□ 0.86
SUDS3-204ENST00000543473 LRRC4Q9HBW1 653 aa20.4■□□□□ 0.86
SUDS3-204ENST00000543473 KLHL8Q9P2G9 620 aaPredicted RBP20.4■□□□□ 0.86
SUDS3-204ENST00000543473 A0A087X0B3 334 aa20.39■□□□□ 0.86
SUDS3-204ENST00000543473 TRAPPC3O43617 180 aa20.39■□□□□ 0.86
SUDS3-204ENST00000543473 ITGA4P13612 1032 aa20.39■□□□□ 0.86
SUDS3-204ENST00000543473 SMARCA1P28370 1054 aa20.39■□□□□ 0.86
SUDS3-204ENST00000543473 PPM1FP49593 454 aaPredicted RBP20.39■□□□□ 0.86
SUDS3-204ENST00000543473 DAGLBQ8NCG7 672 aa20.39■□□□□ 0.86
SUDS3-204ENST00000543473 SEMA4AQ9H3S1 761 aa20.39■□□□□ 0.86
SUDS3-204ENST00000543473 RAVER2Q9HCJ3 691 aaKnown RBP20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms