RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-217	ENST00000543449		F8W810	466 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	TGM5	O43548	720 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	XYLB	O75191	536 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	ZMYND10	O75800	440 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	IL18RAP	O95256	599 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	GCNT3	O95395	438 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	CXCL8	P10145	99 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	GART	P22102	1010 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	MCM4	P33991	863 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	RAB33A	Q14088	237 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	ZNF280D	Q6N043	979 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	LILRA6	Q6PI73	481 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	TMC5	Q6UXY8	1006 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	PALB2	Q86YC2	1186 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	UBALD2	Q8IYN6	164 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	CEP57L1	Q8IYX8	460 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	SYCP3	Q8IZU3	236 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	PDILT	Q8N807	584 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	POMGNT1	Q8WZA1	660 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	RABGGTA	Q92696	567 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	EDA	Q92838	391 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	SUSD3	Q96L08	255 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	POMK	Q9H5K3	350 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	TSHZ2	Q9NRE2	1034 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	KBTBD4	Q9NVX7	518 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	FBXW11	Q9UKB1	542 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	CPSF3	Q9UKF6	684 aa	Known RBP	11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	HCN4	Q9Y3Q4	1203 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	C2CD2	Q9Y426	696 aa		11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	11.18	□□□□□ -0.62
NPIPB4-217	ENST00000543449	PPP1R37	O75864	691 aa		11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	MYL1	P05976	194 aa		11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	ELF1	P32519	619 aa		11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	SNRPF	P62306	86 aa	Known RBP	11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	PTPN21	Q16825	1174 aa		11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	PPM1L	Q5SGD2	360 aa		11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	C12orf76	Q8N812	135 aa	Predicted RBP	11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	SMG7	Q92540	1137 aa	Known RBP	11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	NXPE3	Q969Y0	559 aa		11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	DHX58	Q96C10	678 aa		11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	CCDC34	Q96HJ3	373 aa		11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	MFSD14A	Q96MC6	490 aa		11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	ZMAT2	Q96NC0	199 aa	Known RBP	11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	CLSTN3	Q9BQT9	956 aa		11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	STRA6	Q9BX79	667 aa		11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	PANK2	Q9BZ23	570 aa		11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	PRKD2	Q9BZL6	878 aa		11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	GOLGA2P5	Q9HBQ8	144 aa		11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	WDR6	Q9NNW5	1121 aa	Known RBP	11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	MUTYH	Q9UIF7	546 aa		11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	RCOR1	Q9UKL0	485 aa		11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	PCDHB8	Q9UN66	801 aa		11.17	□□□□□ -0.62
NPIPB4-217	ENST00000543449	CLUH	O75153	1309 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	UBE4B	O95155	1302 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	PVALEF	A0A1B0GWK0	134 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	LACTBL1	A8MY62	500 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	EIF3D	O15371	548 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	FAM189A1	O60320	539 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	TKT	P29401	623 aa	Known RBP	11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	PNPLA4	P41247	253 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	ASIC1	P78348	528 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	ZXDA	P98168	799 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	DNM1	Q05193	864 aa	Known RBP	11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	SOX4	Q06945	474 aa	Predicted RBP	11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	SIGLEC14	Q08ET2	396 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	MTMR3	Q13615	1198 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	TMEM132D	Q14C87	1099 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	ZBTB6	Q15916	424 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	ENOX2	Q16206	610 aa	Known RBP	11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	E2F4	Q16254	413 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	VARS2	Q5ST30	1063 aa	Known RBP	11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	SPATA1	Q5VX52	437 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	RESP18	Q5W5W9	173 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	TPGS2	Q68CL5	300 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	SLC8B1	Q6J4K2	584 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	SHC4	Q6S5L8	630 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	BMP8A	Q7Z5Y6	402 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	USP37	Q86T82	979 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	GLYCTK	Q8IVS8	523 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	ZNF461	Q8TAF7	563 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	CACTIN	Q8WUQ7	758 aa	Known RBP	11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	C18orf25	Q96B23	403 aa	Predicted RBP	11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	FAM212A	Q96EL1	285 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	B3GALT6	Q96L58	329 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	SPATA32	Q96LK8	384 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	C7orf25	Q9BPX7	421 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	LRFN3	Q9BTN0	628 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	TRIM9	Q9C026	710 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	KCNH6	Q9H252	994 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	CXCL16	Q9H2A7	254 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	KIAA1586	Q9HCI6	787 aa		11.16	□□□□□ -0.62
NPIPB4-217	ENST00000543449	IGSF9	Q9P2J2	1179 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms