RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 KRI1Q8N9T8 703 aaKnown RBP14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 LINC00301Q8NCQ3 95 aa14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 RASSF8Q8NHQ8 419 aa14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 PLEKHA5Q9HAU0 1116 aa14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 CCDC39Q9UFE4 941 aa14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 SORCS3Q9UPU3 1222 aa14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 HCN4Q9Y3Q4 1203 aa14.31□□□□□ -0.12
TNFRSF1A-215ENST00000543359 LACTBL1A8MY62 500 aa14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 ANKRD63C9JTQ0 380 aa14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 K7ENM7 598 aa14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 HNRNPDLO14979 420 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 TRAPPC3O43617 180 aa14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 KRT18P05783 430 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 OR1D2P34982 312 aa14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 ENOX2Q16206 610 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 ZC2HC1CQ53FD0 456 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 PDXDC1Q6P996 788 aa14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 UBALD2Q8IYN6 164 aa14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 SMG7Q92540 1137 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 DDX12PQ92771 950 aa14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 PBXIP1Q96AQ6 731 aa14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 MFSD14AQ96MC6 490 aa14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 MYADMQ96S97 322 aa14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 PANK2Q9BZ23 570 aa14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 IKZF4Q9H2S9 585 aa14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 TUBGCP4Q9UGJ1 667 aa14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 CPSF3Q9UKF6 684 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 GTF3C3Q9Y5Q9 886 aa14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 STYXL1Q9Y6J8 313 aa14.3□□□□□ -0.12
TNFRSF1A-215ENST00000543359 FRMD3A2A2Y4 597 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 SPDYE4A6NLX3 237 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 TISP43B9A030 160 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 OGTO15294 1046 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 TBCAO75347 108 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 CYP3A5P20815 502 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 ADSSP30520 456 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 LRPAP1P30533 357 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 PLA2G5P39877 138 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 LIG4P49917 911 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 SPAG1Q07617 926 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 VARS2Q5ST30 1063 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 SLC8B1Q6J4K2 584 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 ELMSAN1Q6PJG2 1045 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 SV2BQ7L1I2 683 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 DYMQ7RTS9 669 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 SFR1Q86XK3 245 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 ACSF2Q96CM8 615 aaPredicted RBP14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 BICD1Q96G01 975 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 ZHX3Q9H4I2 956 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 TFIP11Q9UBB9 837 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 EPS15L1Q9UBC2 864 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 CDY1Q9Y6F8 540 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 CLUHO75153 1309 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 ANK1P16157 1881 aa14.29□□□□□ -0.12
TNFRSF1A-215ENST00000543359 SYN3O14994 580 aa14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 ABLIM3O94929 683 aa14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 PDGFBP01127 241 aaPredicted RBP14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 C8AP07357 584 aa14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 POU2F2P09086 479 aa14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 HNRNPA1P09651 372 aaKnown RBP eCLIP14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 HOXA9P31269 272 aa14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 AARSP49588 968 aaKnown RBP eCLIP14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 KCNA1Q09470 495 aa14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 MTMR3Q13615 1198 aa14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 E2F4Q16254 413 aa14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 KYAT1Q16773 422 aa14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 UVSSAQ2YD98 709 aa14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 AXDND1Q5T1B0 1012 aaPredicted RBP14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 CCDC73Q6ZRK6 1079 aa14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 ANKS3Q6ZW76 656 aa14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 KMT2EQ8IZD2 1858 aa14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 FBXL6Q8N531 539 aa14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 SUSD3Q96L08 255 aa14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 MSTO1Q9BUK6 570 aa14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 KCNK12Q9HB15 430 aa14.28□□□□□ -0.12
TNFRSF1A-215ENST00000543359 M0QZQ0 153 aa14.27□□□□□ -0.13
TNFRSF1A-215ENST00000543359 SPTLC2O15270 562 aa14.27□□□□□ -0.13
TNFRSF1A-215ENST00000543359 PPP6R2O75170 966 aa14.27□□□□□ -0.13
TNFRSF1A-215ENST00000543359 ABCD1P33897 745 aa14.27□□□□□ -0.13
TNFRSF1A-215ENST00000543359 TXLNAP40222 546 aa14.27□□□□□ -0.13
TNFRSF1A-215ENST00000543359 MATR3P43243 847 aaKnown RBP eCLIP14.27□□□□□ -0.13
TNFRSF1A-215ENST00000543359 GUCY2FP51841 1108 aa14.27□□□□□ -0.13
TNFRSF1A-215ENST00000543359 PKP1Q13835 747 aa14.27□□□□□ -0.13
TNFRSF1A-215ENST00000543359 STK38Q15208 465 aa14.27□□□□□ -0.13
TNFRSF1A-215ENST00000543359 IER5LQ5T953 404 aa14.27□□□□□ -0.13
TNFRSF1A-215ENST00000543359 CRELD2Q6UXH1 353 aaPredicted RBP14.27□□□□□ -0.13
TNFRSF1A-215ENST00000543359 RTL10Q7L3V2 364 aa14.27□□□□□ -0.13
TNFRSF1A-215ENST00000543359 ZNF461Q8TAF7 563 aa14.27□□□□□ -0.13
TNFRSF1A-215ENST00000543359 KIF12Q96FN5 646 aa14.27□□□□□ -0.13
TNFRSF1A-215ENST00000543359 TSPAN18Q96SJ8 248 aa14.27□□□□□ -0.13
TNFRSF1A-215ENST00000543359 FGFBP2Q9BYJ0 223 aa14.27□□□□□ -0.13
TNFRSF1A-215ENST00000543359 SEL1LQ9UBV2 794 aa14.27□□□□□ -0.13
TNFRSF1A-215ENST00000543359 WDR27A2RRH5 827 aa14.26□□□□□ -0.13
TNFRSF1A-215ENST00000543359 PPEF2O14830 753 aa14.26□□□□□ -0.13
TNFRSF1A-215ENST00000543359 CCL16O15467 120 aa14.26□□□□□ -0.13
TNFRSF1A-215ENST00000543359 ZSCAN22P10073 491 aaPredicted RBP14.26□□□□□ -0.13
TNFRSF1A-215ENST00000543359 LAMP2P13473 410 aa14.26□□□□□ -0.13
TNFRSF1A-215ENST00000543359 GAP43P17677 238 aa14.26□□□□□ -0.13
TNFRSF1A-215ENST00000543359 ACOT2P49753 483 aa14.26□□□□□ -0.13
TNFRSF1A-215ENST00000543359 CASP5P51878 434 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms