RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 UNGP13051 313 aaPredicted RBP17.68■□□□□ 0.42
KDM2B-216ENST00000543025 SFNP31947 248 aa17.68■□□□□ 0.42
KDM2B-216ENST00000543025 SF3A3Q12874 501 aaKnown RBP eCLIP17.68■□□□□ 0.422e-6■■■■■ 47.8
KDM2B-216ENST00000543025 PREPLQ4J6C6 727 aaPredicted RBP17.68■□□□□ 0.42
KDM2B-216ENST00000543025 OTUD6AQ7L8S5 288 aa17.68■□□□□ 0.42
KDM2B-216ENST00000543025 FAM228AQ86W67 206 aa17.68■□□□□ 0.42
KDM2B-216ENST00000543025 POMGNT1Q8WZA1 660 aa17.68■□□□□ 0.42
KDM2B-216ENST00000543025 TEPSINQ96N21 525 aa17.68■□□□□ 0.42
KDM2B-216ENST00000543025 KMT5AQ9NQR1 393 aa17.68■□□□□ 0.42
KDM2B-216ENST00000543025 AVENQ9NQS1 362 aaPredicted RBP17.68■□□□□ 0.42
KDM2B-216ENST00000543025 MAP3K20Q9NYL2 800 aaKnown RBP17.68■□□□□ 0.42
KDM2B-216ENST00000543025 TMEM120BA0PK00 339 aa17.68■□□□□ 0.42
KDM2B-216ENST00000543025 EIF2AK2P19525 551 aaKnown RBP17.68■□□□□ 0.42
KDM2B-216ENST00000543025 IVDP26440 423 aa17.68■□□□□ 0.42
KDM2B-216ENST00000543025 CYP24A1Q07973 514 aa17.68■□□□□ 0.42
KDM2B-216ENST00000543025 PGM5Q15124 567 aa17.68■□□□□ 0.42
KDM2B-216ENST00000543025 WLSQ5T9L3 541 aa17.68■□□□□ 0.42
KDM2B-216ENST00000543025 MCOLN2Q8IZK6 566 aa17.68■□□□□ 0.42
KDM2B-216ENST00000543025 CPXCR1Q8N123 301 aa17.68■□□□□ 0.42
KDM2B-216ENST00000543025 ATG4AQ8WYN0 398 aa17.68■□□□□ 0.42
KDM2B-216ENST00000543025 SCLT1Q96NL6 688 aa17.68■□□□□ 0.42
KDM2B-216ENST00000543025 TRAIPQ9BWF2 469 aa17.68■□□□□ 0.42
KDM2B-216ENST00000543025 MROH7Q68CQ1 1323 aa17.68■□□□□ 0.42
KDM2B-216ENST00000543025 ZC3H11AO75152 810 aaKnown RBP eCLIP17.67■□□□□ 0.42
KDM2B-216ENST00000543025 MYBL1P10243 752 aa17.67■□□□□ 0.42
KDM2B-216ENST00000543025 ITGA8P53708 1063 aa17.67■□□□□ 0.42
KDM2B-216ENST00000543025 ELF3P78545 371 aaPredicted RBP17.67■□□□□ 0.42
KDM2B-216ENST00000543025 KRT76Q01546 638 aa17.67■□□□□ 0.42
KDM2B-216ENST00000543025 LRRC14Q15048 493 aa17.67■□□□□ 0.42
KDM2B-216ENST00000543025 HIBCHQ6NVY1 386 aaPredicted RBP17.67■□□□□ 0.42
KDM2B-216ENST00000543025 CCDC63Q8NA47 563 aa17.67■□□□□ 0.42
KDM2B-216ENST00000543025 TRIM11Q96F44 468 aa17.67■□□□□ 0.42
KDM2B-216ENST00000543025 DCLK3Q9C098 648 aa17.67■□□□□ 0.42
KDM2B-216ENST00000543025 ATP9AO75110 1047 aa17.67■□□□□ 0.42
KDM2B-216ENST00000543025 OAS1P00973 400 aaKnown RBP17.67■□□□□ 0.42
KDM2B-216ENST00000543025 ATF2P15336 505 aa17.67■□□□□ 0.42
KDM2B-216ENST00000543025 SLC39A4Q6P5W5 647 aa17.67■□□□□ 0.42
KDM2B-216ENST00000543025 RPAINQ86UA6 219 aa17.67■□□□□ 0.42
KDM2B-216ENST00000543025 MGARPQ8TDB4 240 aa17.67■□□□□ 0.42
KDM2B-216ENST00000543025 ELMO3Q96BJ8 720 aa17.67■□□□□ 0.42
KDM2B-216ENST00000543025 TAAR1Q96RJ0 339 aa17.67■□□□□ 0.42
KDM2B-216ENST00000543025 ZNF341Q9BYN7 854 aa17.67■□□□□ 0.42
KDM2B-216ENST00000543025 HOMER2Q9NSB8 354 aa17.67■□□□□ 0.42
KDM2B-216ENST00000543025 THAP12O43422 761 aa17.66■□□□□ 0.42
KDM2B-216ENST00000543025 SLC8A1P32418 973 aa17.66■□□□□ 0.42
KDM2B-216ENST00000543025 VSTM1Q6UX27 236 aa17.66■□□□□ 0.42
KDM2B-216ENST00000543025 ANO5Q75V66 913 aa17.66■□□□□ 0.42
KDM2B-216ENST00000543025 ZNF677Q86XU0 584 aa17.66■□□□□ 0.42
KDM2B-216ENST00000543025 GPD1LQ8N335 351 aa17.66■□□□□ 0.42
KDM2B-216ENST00000543025 ATL2Q8NHH9 583 aa17.66■□□□□ 0.42
KDM2B-216ENST00000543025 SPIRE2Q8WWL2 714 aa17.66■□□□□ 0.42
KDM2B-216ENST00000543025 NTPCRQ9BSD7 190 aaKnown RBP17.66■□□□□ 0.42
KDM2B-216ENST00000543025 TRIM7Q9C029 511 aa17.66■□□□□ 0.42
KDM2B-216ENST00000543025 C17orf75Q9HAS0 396 aa17.66■□□□□ 0.42
KDM2B-216ENST00000543025 C1orf112Q9NSG2 853 aa17.66■□□□□ 0.42
KDM2B-216ENST00000543025 USP15Q9Y4E8 981 aaPredicted RBP17.66■□□□□ 0.42
KDM2B-216ENST00000543025 CFAP73A6NFT4 308 aa17.66■□□□□ 0.42
KDM2B-216ENST00000543025 CCNE2O96020 404 aa17.66■□□□□ 0.42
KDM2B-216ENST00000543025 MYCLP12524 364 aaPredicted RBP17.66■□□□□ 0.42
KDM2B-216ENST00000543025 RRM1P23921 792 aa17.66■□□□□ 0.42
KDM2B-216ENST00000543025 RPS6P62753 249 aaKnown RBP17.66■□□□□ 0.42
KDM2B-216ENST00000543025 CENPCQ03188 943 aa17.66■□□□□ 0.42
KDM2B-216ENST00000543025 ENPEPQ07075 957 aa17.66■□□□□ 0.42
KDM2B-216ENST00000543025 TRIP13Q15645 432 aaPredicted RBP17.66■□□□□ 0.42
KDM2B-216ENST00000543025 EAPPQ56P03 285 aaPredicted RBP17.66■□□□□ 0.42
KDM2B-216ENST00000543025 CEP57Q86XR8 500 aa17.66■□□□□ 0.42
KDM2B-216ENST00000543025 PI4K2AQ9BTU6 479 aa17.66■□□□□ 0.42
KDM2B-216ENST00000543025 ABCF3Q9NUQ8 709 aa17.66■□□□□ 0.42
KDM2B-216ENST00000543025 TCP11X1B4DZS4 312 aa17.65■□□□□ 0.42
KDM2B-216ENST00000543025 WDR46O15213 610 aaKnown RBP17.65■□□□□ 0.42
KDM2B-216ENST00000543025 SORBS3O60504 671 aa17.65■□□□□ 0.42
KDM2B-216ENST00000543025 TCEA3O75764 348 aa17.65■□□□□ 0.42
KDM2B-216ENST00000543025 CREB1P16220 341 aa17.65■□□□□ 0.42
KDM2B-216ENST00000543025 ADCY8P40145 1251 aa17.65■□□□□ 0.42
KDM2B-216ENST00000543025 NEDD9Q14511 834 aa17.65■□□□□ 0.42
KDM2B-216ENST00000543025 KYNUQ16719 465 aa17.65■□□□□ 0.42
KDM2B-216ENST00000543025 FAM133BQ5BKY9 247 aaKnown RBP17.65■□□□□ 0.42
KDM2B-216ENST00000543025 SAMD3Q8N6K7 520 aa17.65■□□□□ 0.42
KDM2B-216ENST00000543025 DDX27Q96GQ7 796 aaKnown RBP17.65■□□□□ 0.42
KDM2B-216ENST00000543025 HERPUD2Q9BSE4 406 aa17.65■□□□□ 0.42
KDM2B-216ENST00000543025 RAVER2Q9HCJ3 691 aaKnown RBP17.65■□□□□ 0.42
KDM2B-216ENST00000543025 CTNNAL1Q9UBT7 734 aa17.65■□□□□ 0.42
KDM2B-216ENST00000543025 ANAPC5Q9UJX4 755 aa17.65■□□□□ 0.42
KDM2B-216ENST00000543025 PCDHB2Q9Y5E7 798 aa17.65■□□□□ 0.42
KDM2B-216ENST00000543025 MYPNQ86TC9 1320 aa17.65■□□□□ 0.42
KDM2B-216ENST00000543025 HNRNPDLO14979 420 aaKnown RBP17.65■□□□□ 0.42
KDM2B-216ENST00000543025 NSFP46459 744 aaKnown RBP17.65■□□□□ 0.42
KDM2B-216ENST00000543025 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.65■□□□□ 0.428e-7■■■■■ 52
KDM2B-216ENST00000543025 CPA5Q8WXQ8 436 aa17.65■□□□□ 0.42
KDM2B-216ENST00000543025 BSNDQ8WZ55 320 aa17.65■□□□□ 0.42
KDM2B-216ENST00000543025 KCNK9Q9NPC2 374 aa17.65■□□□□ 0.42
KDM2B-216ENST00000543025 FGFR1OP2Q9NVK5 253 aa17.65■□□□□ 0.42
KDM2B-216ENST00000543025 SUN1O94901 812 aa17.64■□□□□ 0.41
KDM2B-216ENST00000543025 ATP6V1G2O95670 118 aa17.64■□□□□ 0.41
KDM2B-216ENST00000543025 CALCAP01258 141 aa17.64■□□□□ 0.41
KDM2B-216ENST00000543025 PTP4A2Q12974 167 aa17.64■□□□□ 0.41
KDM2B-216ENST00000543025 NUGGCQ68CJ6 796 aa17.64■□□□□ 0.41
KDM2B-216ENST00000543025 DCPSQ96C86 337 aaKnown RBP17.64■□□□□ 0.41
KDM2B-216ENST00000543025 RRAGCQ9HB90 399 aa17.64■□□□□ 0.41
KDM2B-216ENST00000543025 SLC38A10Q9HBR0 1119 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms