RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 ELF1P32519 619 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 THBS2P35442 1172 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 KRT9P35527 623 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 SERPINF1P36955 418 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 SLC6A9P48067 706 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 RPS16P62249 146 aaKnown RBP4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 CYP4F8P98187 520 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 CHRNEQ04844 493 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 NFATC3Q12968 1075 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 SPARCL1Q14515 664 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 KCNA10Q16322 511 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 C3orf38Q5JPI3 329 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 KHDC1LQ5JSQ8 128 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 GADL1Q6ZQY3 521 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 TTLL10Q6ZVT0 673 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 BEND5Q7L4P6 421 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 BMP8AQ7Z5Y6 402 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 ESX1Q8N693 406 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 OR5AN1Q8NGI8 311 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 HOXB13Q92826 284 aaPredicted RBP4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 ZBTB10Q96DT7 871 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 DDX11Q96FC9 970 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 ADAMTS10Q9H324 1103 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 WDCPQ9H6R7 721 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 WASH6PQ9NQA3 447 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 BLOC1S4Q9NUP1 217 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 GALNT8Q9NY28 637 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 GGA3Q9NZ52 723 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 DTLQ9NZJ0 730 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 CALCOCO1Q9P1Z2 691 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 TMEM59LQ9UK28 342 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 SIK3Q9Y2K2 1263 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 TMEM98Q9Y2Y6 226 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 AFG3L2Q9Y4W6 797 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 PCDHA1Q9Y5I3 950 aa4.58□□□□□ -1.68
SFSWAP-211ENST00000542813 TARBP1Q13395 1621 aaKnown RBP4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 RPTORQ8N122 1335 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 TCAF2A6NFQ2 919 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 ZNF839A8K0R7 811 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 IPO5O00410 1097 aaKnown RBP4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 PRRG2O14669 202 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 SRGAP3O43295 1099 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 THAP12O43422 761 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 LRG1P02750 347 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 POLBP06746 335 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 ANXA2P07355 339 aaKnown RBP4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 FTH1P19P0C7X4 201 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 GLDCP23378 1020 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 CTSSP25774 331 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 ECHS1P30084 290 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 ADSLP30566 484 aaPredicted RBP4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 MEF2AQ02078 507 aaPredicted RBP4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 NUCB1Q02818 461 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 TLE1Q04724 770 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 SNAPC2Q13487 334 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 TIGD6Q17RP2 521 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 RALGPS1Q5JS13 557 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 ICE2Q659A1 982 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 FBXO38Q6PIJ6 1188 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 C16orf54Q6UWD8 224 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 ATG14Q6ZNE5 492 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 C4orf50Q6ZRC1 276 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 LRRTM4Q86VH4 590 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 TMTC1Q8IUR5 882 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 WDR48Q8TAF3 677 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 IFI44Q8TCB0 444 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 CCHCR1Q8TD31 782 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 KBTBD7Q8WVZ9 684 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 ASB12Q8WXK4 309 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 MYLIPQ8WY64 445 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 NMD3Q96D46 503 aaKnown RBP4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 SNX22Q96L94 193 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 P2RX7Q99572 595 aaKnown RBP4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 FAM167BQ9BTA0 163 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 BTBD2Q9BX70 525 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 EIF2AQ9BY44 585 aaKnown RBP4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 OR10A5Q9H207 317 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 UBN1Q9NPG3 1134 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 TM7SF3Q9NS93 570 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 TBC1D22BQ9NU19 505 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 MAN2B2Q9Y2E5 1009 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 KDM6BO15054 1643 aa4.57□□□□□ -1.68
SFSWAP-211ENST00000542813 SYNJ2O15056 1496 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 ADGRL1O94910 1474 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 A0A0A6YYK5 440 aaPredicted RBP4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 ZC3H12DA2A288 527 aaKnown RBP4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 AQP12BA6NM10 295 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 NOTOA8MTQ0 251 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 B8ZZF3 427 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 K7ENM7 598 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 PODXLO00592 558 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 PRAMEF4O60810 478 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 PHF2O75151 1096 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 ZBTB7AO95365 584 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 HPXP02790 462 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 ENO2P09104 434 aaPredicted RBP4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 DBHP09172 617 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 CKMT1AP12532 417 aa4.56□□□□□ -1.68
SFSWAP-211ENST00000542813 MYL4P12829 197 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms