RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 PDGFBP01127 241 aaPredicted RBP22.06■■□□□ 1.12
DDB1-220ENST00000542337 LAMP2P13473 410 aa22.06■■□□□ 1.12
DDB1-220ENST00000542337 IGFBP6P24592 240 aaPredicted RBP22.06■■□□□ 1.12
DDB1-220ENST00000542337 MCM4P33991 863 aa22.06■■□□□ 1.12
DDB1-220ENST00000542337 VCPP55072 806 aaKnown RBP22.06■■□□□ 1.12
DDB1-220ENST00000542337 PPP2R3AQ06190 1150 aa22.06■■□□□ 1.12
DDB1-220ENST00000542337 VARS2Q5ST30 1063 aaKnown RBP22.06■■□□□ 1.12
DDB1-220ENST00000542337 GRASPQ7Z6J2 395 aaPredicted RBP22.06■■□□□ 1.12
DDB1-220ENST00000542337 APPL2Q8NEU8 664 aa22.06■■□□□ 1.12
DDB1-220ENST00000542337 SLC7A14Q8TBB6 771 aa22.06■■□□□ 1.12
DDB1-220ENST00000542337 EPSTI1Q96J88 318 aa22.06■■□□□ 1.12
DDB1-220ENST00000542337 ZSCAN16Q9H4T2 348 aaPredicted RBP22.06■■□□□ 1.12
DDB1-220ENST00000542337 STK17AQ9UEE5 414 aa22.06■■□□□ 1.12
DDB1-220ENST00000542337 K7ELQ4 463 aaPredicted RBP22.05■■□□□ 1.12
DDB1-220ENST00000542337 CCL16O15467 120 aa22.05■■□□□ 1.12
DDB1-220ENST00000542337 N4BP1O75113 896 aaKnown RBP22.05■■□□□ 1.12
DDB1-220ENST00000542337 CXCL8P10145 99 aa22.05■■□□□ 1.12
DDB1-220ENST00000542337 CEBPZQ03701 1054 aaKnown RBP22.05■■□□□ 1.12
DDB1-220ENST00000542337 RESTQ13127 1097 aa22.05■■□□□ 1.12
DDB1-220ENST00000542337 PTPAQ15257 358 aa22.05■■□□□ 1.12
DDB1-220ENST00000542337 RRAGBQ5VZM2 374 aa22.05■■□□□ 1.12
DDB1-220ENST00000542337 KIF12Q96FN5 646 aa22.05■■□□□ 1.12
DDB1-220ENST00000542337 TSPAN18Q96SJ8 248 aa22.05■■□□□ 1.12
DDB1-220ENST00000542337 RPF1Q9H9Y2 349 aaKnown RBP22.05■■□□□ 1.12
DDB1-220ENST00000542337 PLXNA3P51805 1871 aa22.05■■□□□ 1.12
DDB1-220ENST00000542337 OGTO15294 1046 aa22.04■■□□□ 1.12
DDB1-220ENST00000542337 PIGRP01833 764 aa22.04■■□□□ 1.12
DDB1-220ENST00000542337 POU2F2P09086 479 aa22.04■■□□□ 1.12
DDB1-220ENST00000542337 SPECC1Q5M775 1068 aa22.04■■□□□ 1.12
DDB1-220ENST00000542337 ASTLQ6HA08 431 aaPredicted RBP22.04■■□□□ 1.12
DDB1-220ENST00000542337 PRSS33Q8NF86 280 aa22.04■■□□□ 1.12
DDB1-220ENST00000542337 ZNF461Q8TAF7 563 aa22.04■■□□□ 1.12
DDB1-220ENST00000542337 MSTO1Q9BUK6 570 aa22.04■■□□□ 1.12
DDB1-220ENST00000542337 FOXD4L1Q9NU39 408 aa22.04■■□□□ 1.12
DDB1-220ENST00000542337 FBXO2Q9UK22 296 aaPredicted RBP22.04■■□□□ 1.12
DDB1-220ENST00000542337 UBQLN1Q9UMX0 589 aaKnown RBP22.04■■□□□ 1.12
DDB1-220ENST00000542337 PRRG1O14668 218 aa22.03■■□□□ 1.12
DDB1-220ENST00000542337 CLCN5P51795 746 aa22.03■■□□□ 1.12
DDB1-220ENST00000542337 ARPP19P56211 112 aa22.03■■□□□ 1.12
DDB1-220ENST00000542337 GTF2BQ00403 316 aa22.03■■□□□ 1.12
DDB1-220ENST00000542337 SLC8B1Q6J4K2 584 aa22.03■■□□□ 1.12
DDB1-220ENST00000542337 RSPO2Q6UXX9 243 aaPredicted RBP22.03■■□□□ 1.12
DDB1-220ENST00000542337 SV2BQ7L1I2 683 aa22.03■■□□□ 1.12
DDB1-220ENST00000542337 CD302Q8IX05 232 aa22.03■■□□□ 1.12
DDB1-220ENST00000542337 SLC44A3Q8N4M1 653 aa22.03■■□□□ 1.12
DDB1-220ENST00000542337 LRRC15Q8TF66 581 aa22.03■■□□□ 1.12
DDB1-220ENST00000542337 SUSD3Q96L08 255 aa22.03■■□□□ 1.12
DDB1-220ENST00000542337 MYO10Q9HD67 2058 aa22.03■■□□□ 1.12
DDB1-220ENST00000542337 TTC26A0AVF1 554 aa22.02■■□□□ 1.12
DDB1-220ENST00000542337 STX6O43752 255 aa22.02■■□□□ 1.12
DDB1-220ENST00000542337 LRG1P02750 347 aa22.02■■□□□ 1.12
DDB1-220ENST00000542337 CYP3A5P20815 502 aa22.02■■□□□ 1.12
DDB1-220ENST00000542337 CTXN3Q4LDR2 81 aa22.02■■□□□ 1.12
DDB1-220ENST00000542337 SLFN12LQ6IEE8 588 aa22.02■■□□□ 1.12
DDB1-220ENST00000542337 ZNF280DQ6N043 979 aa22.02■■□□□ 1.12
DDB1-220ENST00000542337 FAM173BQ6P4H8 233 aa22.02■■□□□ 1.12
DDB1-220ENST00000542337 CCDC73Q6ZRK6 1079 aa22.02■■□□□ 1.12
DDB1-220ENST00000542337 USP49Q70CQ1 688 aa22.02■■□□□ 1.12
DDB1-220ENST00000542337 ALYREFQ86V81 257 aaKnown RBP22.02■■□□□ 1.12
DDB1-220ENST00000542337 FLCNQ8NFG4 579 aa22.02■■□□□ 1.12
DDB1-220ENST00000542337 RSAD2Q8WXG1 361 aa22.02■■□□□ 1.12
DDB1-220ENST00000542337 FAM212AQ96EL1 285 aa22.02■■□□□ 1.12
DDB1-220ENST00000542337 HAPLN2Q9GZV7 340 aa22.02■■□□□ 1.12
DDB1-220ENST00000542337 WNT16Q9UBV4 365 aa22.02■■□□□ 1.12
DDB1-220ENST00000542337 TUBGCP4Q9UGJ1 667 aa22.02■■□□□ 1.12
DDB1-220ENST00000542337 CDH7Q9ULB5 785 aa22.02■■□□□ 1.12
DDB1-220ENST00000542337 PCDHB8Q9UN66 801 aa22.02■■□□□ 1.12
DDB1-220ENST00000542337 MTMR6Q9Y217 621 aa22.02■■□□□ 1.12
DDB1-220ENST00000542337 DENND4AQ7Z401 1863 aa22.02■■□□□ 1.12
DDB1-220ENST00000542337 A0A0B4J269 797 aa22.01■■□□□ 1.11
DDB1-220ENST00000542337 LACTBL1A8MY62 500 aa22.01■■□□□ 1.11
DDB1-220ENST00000542337 STK25O00506 426 aa22.01■■□□□ 1.11
DDB1-220ENST00000542337 MEFVO15553 781 aaPredicted RBP22.01■■□□□ 1.11
DDB1-220ENST00000542337 SRFP11831 508 aa22.01■■□□□ 1.11
DDB1-220ENST00000542337 RFX1P22670 979 aa22.01■■□□□ 1.11
DDB1-220ENST00000542337 NMT1P30419 496 aaKnown RBP22.01■■□□□ 1.11
DDB1-220ENST00000542337 LRPAP1P30533 357 aa22.01■■□□□ 1.11
DDB1-220ENST00000542337 ROR1Q01973 937 aa22.01■■□□□ 1.11
DDB1-220ENST00000542337 SPAG1Q07617 926 aa22.01■■□□□ 1.11
DDB1-220ENST00000542337 PABPC1LQ4VXU2 614 aaKnown RBP22.01■■□□□ 1.11
DDB1-220ENST00000542337 TPGS2Q68CL5 300 aa22.01■■□□□ 1.11
DDB1-220ENST00000542337 DYMQ7RTS9 669 aa22.01■■□□□ 1.11
DDB1-220ENST00000542337 MAP4K3Q8IVH8 894 aa22.01■■□□□ 1.11
DDB1-220ENST00000542337 DDX12PQ92771 950 aa22.01■■□□□ 1.11
DDB1-220ENST00000542337 CLIC6Q96NY7 704 aa22.01■■□□□ 1.11
DDB1-220ENST00000542337 KCNH3Q9ULD8 1083 aa22.01■■□□□ 1.11
DDB1-220ENST00000542337 ZNF318Q5VUA4 2279 aa22■■□□□ 1.11
DDB1-220ENST00000542337 MTCL1Q9Y4B5 1905 aaKnown RBP22■■□□□ 1.11
DDB1-220ENST00000542337 C2orf16Q68DN1 1984 aa22■■□□□ 1.11
DDB1-220ENST00000542337 ABLIM3O94929 683 aa22■■□□□ 1.11
DDB1-220ENST00000542337 ATF2P15336 505 aa22■■□□□ 1.11
DDB1-220ENST00000542337 GAP43P17677 238 aa22■■□□□ 1.11
DDB1-220ENST00000542337 TNFSF9P41273 254 aa22■■□□□ 1.11
DDB1-220ENST00000542337 NTHL1P78549 312 aa22■■□□□ 1.11
DDB1-220ENST00000542337 MRPL58Q14197 206 aaKnown RBP22■■□□□ 1.11
DDB1-220ENST00000542337 SLC39A14Q15043 492 aa22■■□□□ 1.11
DDB1-220ENST00000542337 ENOX2Q16206 610 aaKnown RBP22■■□□□ 1.11
DDB1-220ENST00000542337 MTSS1LQ765P7 747 aa22■■□□□ 1.11
DDB1-220ENST00000542337 USP37Q86T82 979 aa22■■□□□ 1.11
DDB1-220ENST00000542337 SIX5Q8N196 739 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms