RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	CGRRF1	Q99675	332 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	C11orf70	Q9BRQ4	267 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	CREBZF	Q9NS37	354 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	C10orf67	Q8IYJ2	551 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	CABS1	Q96KC9	395 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	COLEC11	Q9BWP8	271 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	DPP3	Q9NY33	737 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	SRRD	Q9UH36	339 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	COL1A2	P08123	1366 aa		13.17	□□□□□ -0.3
ABCB8-222	ENST00000542328	CYP26A1	O43174	497 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	ATF2	P15336	505 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	GLRA2	P23416	452 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	EIF4B	P23588	611 aa	Known RBP	13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	ADORA2B	P29275	332 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	RTP1	P59025	263 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	UGCG	Q16739	394 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	ANO5	Q75V66	913 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	ANKRD42	Q8N9B4	389 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	MGARP	Q8TDB4	240 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	MBOAT7	Q96N66	472 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	UBN1	Q9NPG3	1134 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	MED4	Q9NPJ6	270 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	AAAS	Q9NRG9	546 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	NDC80	O14777	642 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	ITGB3	P05106	788 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	MRPS25	P82663	173 aa	Known RBP	13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	SNX1	Q13596	522 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	MTHFD1L	Q6UB35	978 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	PALM2	Q8IXS6	379 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	ELMOD1	Q8N336	334 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	ASAP3	Q8TDY4	903 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	DNAJC19	Q96DA6	116 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	PBK	Q96KB5	322 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	LCMT1	Q9UIC8	334 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	MYH1	P12882	1939 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	PRPSAP2	O60256	369 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	SRGAP2	O75044	1071 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	AKAP3	O75969	853 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	CLCN6	P51797	869 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	CYP24A1	Q07973	514 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	VEPH1	Q14D04	833 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	GLRA4	Q5JXX5	417 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	PPP2R3C	Q969Q6	453 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	KCNF1	Q9H3M0	494 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	NGRN	Q9NPE2	291 aa	Known RBP	13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	HDAC6	Q9UBN7	1215 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	PLTP	P55058	493 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	LGSN	Q5TDP6	509 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	KCTD16	Q68DU8	428 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	DPF3	Q92784	378 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	AGPAT1	Q99943	283 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	NT5C1A	Q9BXI3	368 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	POLI	Q9UNA4	740 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	FHOD1	Q9Y613	1164 aa		13.16	□□□□□ -0.3
ABCB8-222	ENST00000542328	SART1	O43290	800 aa	Known RBP	13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	PALM	O75781	387 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	TH	P07101	528 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	ARL4A	P40617	200 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	SLC7A5	Q01650	507 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.15	□□□□□ -0.3	7e-6	■■■□□ 16.5
ABCB8-222	ENST00000542328	CFAP157	Q5JU67	520 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	FBXO38	Q6PIJ6	1188 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	GLYCTK	Q8IVS8	523 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	CALR3	Q96L12	384 aa	Known RBP	13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	GNGT1	P63211	74 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	NBPF20	Q3BBV1	942 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	DEFB128	Q7Z7B8	93 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	WDR49	Q8IV35	697 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	AP1M1	Q9BXS5	423 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328		H7C0C1	242 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	SMPD1	P17405	629 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	FGFR4	P22455	802 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	PSMA2	P25787	234 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	ATP5O	P48047	213 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	ALDH7A1	P49419	539 aa	Known RBP	13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	EPHB4	P54760	987 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	PSMC1	P62191	440 aa	Known RBP	13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	NAA30	Q147X3	362 aa	Predicted RBP	13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	ARL13B	Q3SXY8	428 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	KLHDC7A	Q5VTJ3	777 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	DCP1B	Q8IZD4	617 aa	Known RBP	13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	TMEM169	Q96HH4	297 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	CHP1	Q99653	195 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	ASB7	Q9H672	318 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	PCDHB2	Q9Y5E7	798 aa		13.15	□□□□□ -0.3
ABCB8-222	ENST00000542328	EIF3CL	B5ME19	914 aa	Known RBP	13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	B3GAT3	O94766	335 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	FTL	P02792	175 aa	Predicted RBP	13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	FXR1	P51114	621 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	MRPS6	P82932	125 aa	Known RBP	13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	EIF3C	Q99613	913 aa	Known RBP	13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	MTMR12	Q9C0I1	747 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	RNPEP	Q9H4A4	650 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	ANAPC7	Q9UJX3	599 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	STAP1	Q9ULZ2	295 aa		13.14	□□□□□ -0.31
ABCB8-222	ENST00000542328	CDY2A	Q9Y6F7	541 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms