RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 STAMQ92783 540 aa15.33■□□□□ 0.04
SUDS3-203ENST00000541591 EPSTI1Q96J88 318 aa15.33■□□□□ 0.04
SUDS3-203ENST00000541591 CLIC6Q96NY7 704 aa15.33■□□□□ 0.04
SUDS3-203ENST00000541591 ZDHHC7Q9NXF8 308 aa15.33■□□□□ 0.04
SUDS3-203ENST00000541591 DPP7Q9UHL4 492 aa15.33■□□□□ 0.04
SUDS3-203ENST00000541591 RBM19Q9Y4C8 960 aaKnown RBP15.33■□□□□ 0.04
SUDS3-203ENST00000541591 COL4A2P08572 1712 aa15.32■□□□□ 0.04
SUDS3-203ENST00000541591 TULP1O00294 542 aaPredicted RBP15.32■□□□□ 0.04
SUDS3-203ENST00000541591 TOM1L1O75674 476 aa15.32■□□□□ 0.04
SUDS3-203ENST00000541591 MCM4P33991 863 aa15.32■□□□□ 0.04
SUDS3-203ENST00000541591 SMTNP53814 917 aa15.32■□□□□ 0.04
SUDS3-203ENST00000541591 PTPN5P54829 565 aa15.32■□□□□ 0.04
SUDS3-203ENST00000541591 ROR1Q01973 937 aa15.32■□□□□ 0.04
SUDS3-203ENST00000541591 RESTQ13127 1097 aa15.32■□□□□ 0.04
SUDS3-203ENST00000541591 CUL4AQ13619 759 aa15.32■□□□□ 0.04
SUDS3-203ENST00000541591 HDAC7Q8WUI4 952 aa15.32■□□□□ 0.04
SUDS3-203ENST00000541591 FAM212AQ96EL1 285 aa15.32■□□□□ 0.04
SUDS3-203ENST00000541591 UROC1Q96N76 676 aa15.32■□□□□ 0.04
SUDS3-203ENST00000541591 TIPINQ9BVW5 301 aa15.32■□□□□ 0.04
SUDS3-203ENST00000541591 CNTN3Q9P232 1028 aa15.32■□□□□ 0.04
SUDS3-203ENST00000541591 NUB1Q9Y5A7 615 aa15.32■□□□□ 0.04
SUDS3-203ENST00000541591 NUMBLQ9Y6R0 609 aa15.32■□□□□ 0.04
SUDS3-203ENST00000541591 CACNA1HO95180 2353 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 WDR27A2RRH5 827 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 PPEF2O14830 753 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 HNRNPDLO14979 420 aaKnown RBP15.31■□□□□ 0.04
SUDS3-203ENST00000541591 CLDN3O15551 220 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 LAMP2P13473 410 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 KCNE1P15382 129 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 NPR3P17342 541 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 LIG4P49917 911 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 RAB33AQ14088 237 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 ZC2HC1CQ53FD0 456 aaPredicted RBP15.31■□□□□ 0.04
SUDS3-203ENST00000541591 SLC39A4Q6P5W5 647 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 PARM1Q6UWI2 310 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 DYMQ7RTS9 669 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 BRAPQ7Z569 592 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 GPR152Q8TDT2 470 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 ATOH1Q92858 354 aaPredicted RBP15.31■□□□□ 0.04
SUDS3-203ENST00000541591 FGF14Q92915 247 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 KIF12Q96FN5 646 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 AK8Q96MA6 479 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 KXD1Q9BQD3 176 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 NTPCRQ9BSD7 190 aaKnown RBP15.31■□□□□ 0.04
SUDS3-203ENST00000541591 KCNH6Q9H252 994 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 C17orf75Q9HAS0 396 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 SLC38A7Q9NVC3 462 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 EPS15L1Q9UBC2 864 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 DNMT3BQ9UBC3 853 aaKnown RBP15.31■□□□□ 0.04
SUDS3-203ENST00000541591 TIMM13Q9Y5L4 95 aaPredicted RBP15.31■□□□□ 0.04
SUDS3-203ENST00000541591 CACNA1IQ9P0X4 2223 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 PIEZO1Q92508 2521 aa15.31■□□□□ 0.04
SUDS3-203ENST00000541591 KRBA1A5PL33 1030 aa15.3■□□□□ 0.04
SUDS3-203ENST00000541591 LACTBL1A8MY62 500 aa15.3■□□□□ 0.04
SUDS3-203ENST00000541591 ANKRD63C9JTQ0 380 aa15.3■□□□□ 0.04
SUDS3-203ENST00000541591 STK25O00506 426 aa15.3■□□□□ 0.04
SUDS3-203ENST00000541591 NRG2O14511 850 aaPredicted RBP15.3■□□□□ 0.04
SUDS3-203ENST00000541591 TBCAO75347 108 aaKnown RBP15.3■□□□□ 0.04
SUDS3-203ENST00000541591 SEC24AO95486 1093 aa15.3■□□□□ 0.04
SUDS3-203ENST00000541591 SYT1P21579 422 aa15.3■□□□□ 0.04
SUDS3-203ENST00000541591 MCL1Q07820 350 aa15.3■□□□□ 0.04
SUDS3-203ENST00000541591 HTR4Q13639 388 aa15.3■□□□□ 0.04
SUDS3-203ENST00000541591 PTPAQ15257 358 aa15.3■□□□□ 0.04
SUDS3-203ENST00000541591 SLC5A9Q2M3M2 681 aa15.3■□□□□ 0.04
SUDS3-203ENST00000541591 FOXD4L5Q5VV16 416 aaPredicted RBP15.3■□□□□ 0.04
SUDS3-203ENST00000541591 ASTLQ6HA08 431 aaPredicted RBP15.3■□□□□ 0.04
SUDS3-203ENST00000541591 POTEHQ6S545 545 aa15.3■□□□□ 0.04
SUDS3-203ENST00000541591 GPR65Q8IYL9 337 aa15.3■□□□□ 0.04
SUDS3-203ENST00000541591 SLC44A3Q8N4M1 653 aa15.3■□□□□ 0.04
SUDS3-203ENST00000541591 FOXD4L4Q8WXT5 416 aaPredicted RBP15.3■□□□□ 0.04
SUDS3-203ENST00000541591 LARP4BQ92615 738 aaKnown RBP15.3■□□□□ 0.04
SUDS3-203ENST00000541591 TBC1D7Q9P0N9 293 aa15.3■□□□□ 0.04
SUDS3-203ENST00000541591 IGSF9Q9P2J2 1179 aa15.3■□□□□ 0.04
SUDS3-203ENST00000541591 FBXO2Q9UK22 296 aaPredicted RBP15.3■□□□□ 0.04
SUDS3-203ENST00000541591 TBX20Q9UMR3 447 aa15.3■□□□□ 0.04
SUDS3-203ENST00000541591 VPS13AQ96RL7 3174 aa15.29■□□□□ 0.04
SUDS3-203ENST00000541591 TRAPPC3O43617 180 aa15.29■□□□□ 0.04
SUDS3-203ENST00000541591 OR4Q2P0C623 313 aa15.29■□□□□ 0.04
SUDS3-203ENST00000541591 LONP1P36776 959 aaKnown RBP15.29■□□□□ 0.04
SUDS3-203ENST00000541591 ENOX2Q16206 610 aaKnown RBP15.29■□□□□ 0.04
SUDS3-203ENST00000541591 CTXN3Q4LDR2 81 aa15.29■□□□□ 0.04
SUDS3-203ENST00000541591 PDXDC1Q6P996 788 aa15.29■□□□□ 0.04
SUDS3-203ENST00000541591 ZPBP2Q6X784 338 aa15.29■□□□□ 0.04
SUDS3-203ENST00000541591 ANKS3Q6ZW76 656 aa15.29■□□□□ 0.04
SUDS3-203ENST00000541591 SFR1Q86XK3 245 aa15.29■□□□□ 0.04
SUDS3-203ENST00000541591 FGF13Q92913 245 aa15.29■□□□□ 0.04
SUDS3-203ENST00000541591 MSTO1Q9BUK6 570 aa15.29■□□□□ 0.04
SUDS3-203ENST00000541591 PANK2Q9BZ23 570 aa15.29■□□□□ 0.04
SUDS3-203ENST00000541591 PARVGQ9HBI0 331 aa15.29■□□□□ 0.04
SUDS3-203ENST00000541591 CYP4F11Q9HBI6 524 aa15.29■□□□□ 0.04
SUDS3-203ENST00000541591 LARSQ9P2J5 1176 aaKnown RBP15.29■□□□□ 0.04
SUDS3-203ENST00000541591 FBXL5Q9UKA1 691 aa15.29■□□□□ 0.04
SUDS3-203ENST00000541591 ODF2LQ9ULJ1 636 aa15.29■□□□□ 0.04
SUDS3-203ENST00000541591 ATG2BQ96BY7 2078 aa15.28■□□□□ 0.04
SUDS3-203ENST00000541591 GREB1Q4ZG55 1949 aa15.28■□□□□ 0.04
SUDS3-203ENST00000541591 PRRG1O14668 218 aa15.28■□□□□ 0.04
SUDS3-203ENST00000541591 GALR2O43603 387 aaPredicted RBP15.28■□□□□ 0.04
SUDS3-203ENST00000541591 TRAK2O60296 914 aa15.28■□□□□ 0.04
SUDS3-203ENST00000541591 FAM189A1O60320 539 aa15.28■□□□□ 0.04
SUDS3-203ENST00000541591 XYLBO75191 536 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms