RNA–Protein interactions for RNA: ENST00000541548.5

CUL3-214, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-214ENST00000541548 NT5C1B-RDH14C9J2C7 533 aa4.48□□□□□ -1.69
CUL3-214ENST00000541548 TGM1P22735 817 aa4.48□□□□□ -1.69
CUL3-214ENST00000541548 DDX6P26196 483 aaKnown RBP eCLIP4.48□□□□□ -1.69
CUL3-214ENST00000541548 ADRA1BP35368 520 aa4.48□□□□□ -1.69
CUL3-214ENST00000541548 FXR1P51114 621 aaKnown RBP eCLIP4.48□□□□□ -1.69
CUL3-214ENST00000541548 ZNF280AP59817 542 aaPredicted RBP4.48□□□□□ -1.69
CUL3-214ENST00000541548 TGFB2P61812 414 aa4.48□□□□□ -1.69
CUL3-214ENST00000541548 PURAQ00577 322 aaKnown RBP4.48□□□□□ -1.69
CUL3-214ENST00000541548 FOXI1Q12951 378 aa4.48□□□□□ -1.69
CUL3-214ENST00000541548 CLUL1Q15846 466 aa4.48□□□□□ -1.69
CUL3-214ENST00000541548 TIGD2Q4W5G0 525 aa4.48□□□□□ -1.69
CUL3-214ENST00000541548 LAIR1Q6GTX8 287 aa4.48□□□□□ -1.69
CUL3-214ENST00000541548 MAPKAPK5Q8IW41 473 aa4.48□□□□□ -1.69
CUL3-214ENST00000541548 RHOT1Q8IXI2 618 aa4.48□□□□□ -1.69
CUL3-214ENST00000541548 CMTR2Q8IYT2 770 aaKnown RBP4.48□□□□□ -1.69
CUL3-214ENST00000541548 SYNE4Q8N205 404 aa4.48□□□□□ -1.69
CUL3-214ENST00000541548 TMEM132CQ8N3T6 1108 aa4.48□□□□□ -1.69
CUL3-214ENST00000541548 C7orf25Q9BPX7 421 aa4.48□□□□□ -1.69
CUL3-214ENST00000541548 WDR11Q9BZH6 1224 aa4.48□□□□□ -1.69
CUL3-214ENST00000541548 SYNPO2LQ9H987 977 aa4.48□□□□□ -1.69
CUL3-214ENST00000541548 AATKQ6ZMQ8 1374 aa4.48□□□□□ -1.69
CUL3-214ENST00000541548 PIPSLA2A3N6 862 aa4.47□□□□□ -1.69
CUL3-214ENST00000541548 CDHR4A6H8M9 788 aa4.47□□□□□ -1.69
CUL3-214ENST00000541548 XPOTO43592 962 aaKnown RBP4.47□□□□□ -1.69
CUL3-214ENST00000541548 POMCP01189 267 aa4.47□□□□□ -1.69
CUL3-214ENST00000541548 FCER1AP12319 257 aa4.47□□□□□ -1.69
CUL3-214ENST00000541548 ADKP55263 362 aaKnown RBP4.47□□□□□ -1.69
CUL3-214ENST00000541548 RESTQ13127 1097 aa4.47□□□□□ -1.69
CUL3-214ENST00000541548 PTPN21Q16825 1174 aa4.47□□□□□ -1.69
CUL3-214ENST00000541548 PTPROQ16827 1216 aa4.47□□□□□ -1.69
CUL3-214ENST00000541548 TSHZ3Q63HK5 1081 aa4.47□□□□□ -1.69
CUL3-214ENST00000541548 FAM180AQ6UWF9 173 aa4.47□□□□□ -1.69
CUL3-214ENST00000541548 GPR149Q86SP6 731 aa4.47□□□□□ -1.69
CUL3-214ENST00000541548 TMX3Q96JJ7 454 aa4.47□□□□□ -1.69
CUL3-214ENST00000541548 PHACTR3Q96KR7 559 aa4.47□□□□□ -1.69
CUL3-214ENST00000541548 TLR10Q9BXR5 811 aa4.47□□□□□ -1.69
CUL3-214ENST00000541548 C11orf54Q9H0W9 315 aaPredicted RBP4.47□□□□□ -1.69
CUL3-214ENST00000541548 MANSC1Q9H8J5 431 aa4.47□□□□□ -1.69
CUL3-214ENST00000541548 TMEM74BQ9NUR3 256 aa4.47□□□□□ -1.69
CUL3-214ENST00000541548 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.47□□□□□ -1.69
CUL3-214ENST00000541548 PRSS29PA6NIE9 313 aa4.46□□□□□ -1.7
CUL3-214ENST00000541548 GRM6O15303 877 aa4.46□□□□□ -1.7
CUL3-214ENST00000541548 TEX33O43247 280 aa4.46□□□□□ -1.7
CUL3-214ENST00000541548 GCP02774 474 aa4.46□□□□□ -1.7
CUL3-214ENST00000541548 CLK3P49761 638 aaKnown RBP4.46□□□□□ -1.7
CUL3-214ENST00000541548 CXADRP78310 365 aa4.46□□□□□ -1.7
CUL3-214ENST00000541548 HSD11B2P80365 405 aa4.46□□□□□ -1.7
CUL3-214ENST00000541548 KIF23Q02241 960 aaPredicted RBP4.46□□□□□ -1.7
CUL3-214ENST00000541548 ACAP2Q15057 778 aa4.46□□□□□ -1.7
CUL3-214ENST00000541548 CYP2A13Q16696 494 aa4.46□□□□□ -1.7
CUL3-214ENST00000541548 TMEM240Q5SV17 173 aa4.46□□□□□ -1.7
CUL3-214ENST00000541548 HECTD2Q5U5R9 776 aa4.46□□□□□ -1.7
CUL3-214ENST00000541548 TMPRSS9Q7Z410 1059 aa4.46□□□□□ -1.7
CUL3-214ENST00000541548 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.46□□□□□ -1.7
CUL3-214ENST00000541548 MARS2Q96GW9 593 aaKnown RBP4.46□□□□□ -1.7
CUL3-214ENST00000541548 LRIG1Q96JA1 1093 aa4.46□□□□□ -1.7
CUL3-214ENST00000541548 GSTO2Q9H4Y5 243 aa4.46□□□□□ -1.7
CUL3-214ENST00000541548 KCNE5Q9UJ90 142 aa4.46□□□□□ -1.7
CUL3-214ENST00000541548 ZBTB21Q9ULJ3 1066 aa4.46□□□□□ -1.7
CUL3-214ENST00000541548 SLC45A2Q9UMX9 530 aa4.46□□□□□ -1.7
CUL3-214ENST00000541548 SALL3Q9BXA9 1300 aa4.46□□□□□ -1.7
CUL3-214ENST00000541548 LRRC14BA6NHZ5 514 aa4.45□□□□□ -1.7
CUL3-214ENST00000541548 E9PLN8 166 aa4.45□□□□□ -1.7
CUL3-214ENST00000541548 B3GALT2O43825 422 aa4.45□□□□□ -1.7
CUL3-214ENST00000541548 RAMP2O60895 175 aa4.45□□□□□ -1.7
CUL3-214ENST00000541548 PPFIA4O75335 1185 aa4.45□□□□□ -1.7
CUL3-214ENST00000541548 CDKL5O76039 1030 aa4.45□□□□□ -1.7
CUL3-214ENST00000541548 SEC24CP53992 1094 aa4.45□□□□□ -1.7
CUL3-214ENST00000541548 GUCY1B3Q02153 619 aa4.45□□□□□ -1.7
CUL3-214ENST00000541548 PTPAQ15257 358 aa4.45□□□□□ -1.7
CUL3-214ENST00000541548 PRR18Q8N4B5 295 aa4.45□□□□□ -1.7
CUL3-214ENST00000541548 IL17RDQ8NFM7 739 aa4.45□□□□□ -1.7
CUL3-214ENST00000541548 HDAC10Q969S8 669 aa4.45□□□□□ -1.7
CUL3-214ENST00000541548 KLHL32Q96NJ5 620 aa4.45□□□□□ -1.7
CUL3-214ENST00000541548 FAM193BQ96PV7 902 aaPredicted RBP4.45□□□□□ -1.7
CUL3-214ENST00000541548 SMAD5Q99717 465 aaKnown RBP4.45□□□□□ -1.7
CUL3-214ENST00000541548 VKORC1Q9BQB6 163 aa4.45□□□□□ -1.7
CUL3-214ENST00000541548 TOR3AQ9H497 397 aa4.45□□□□□ -1.7
CUL3-214ENST00000541548 RNPEPQ9H4A4 650 aa4.45□□□□□ -1.7
CUL3-214ENST00000541548 TDP1Q9NUW8 608 aa4.45□□□□□ -1.7
CUL3-214ENST00000541548 CTTNBP2NLQ9P2B4 639 aa4.45□□□□□ -1.7
CUL3-214ENST00000541548 PACSIN3Q9UKS6 424 aa4.45□□□□□ -1.7
CUL3-214ENST00000541548 ATP11BQ9Y2G3 1177 aa4.45□□□□□ -1.7
CUL3-214ENST00000541548 TMEM191CA6NGB0 347 aa4.44□□□□□ -1.7
CUL3-214ENST00000541548 SLC43A1O75387 559 aa4.44□□□□□ -1.7
CUL3-214ENST00000541548 HAUS5O94927 633 aa4.44□□□□□ -1.7
CUL3-214ENST00000541548 LMNAP02545 664 aaKnown RBP4.44□□□□□ -1.7
CUL3-214ENST00000541548 CD1AP06126 327 aa4.44□□□□□ -1.7
CUL3-214ENST00000541548 SPATA31D3P0C874 917 aa4.44□□□□□ -1.7
CUL3-214ENST00000541548 CKBP12277 381 aa4.44□□□□□ -1.7
CUL3-214ENST00000541548 MPLP40238 635 aa4.44□□□□□ -1.7
CUL3-214ENST00000541548 INHBEP58166 350 aa4.44□□□□□ -1.7
CUL3-214ENST00000541548 FSTL1Q12841 308 aa4.44□□□□□ -1.7
CUL3-214ENST00000541548 SPATA31D4Q6ZUB0 917 aa4.44□□□□□ -1.7
CUL3-214ENST00000541548 MIGA2Q7L4E1 593 aa4.44□□□□□ -1.7
CUL3-214ENST00000541548 TMIEQ8NEW7 156 aa4.44□□□□□ -1.7
CUL3-214ENST00000541548 NTN5Q8WTR8 489 aaPredicted RBP4.44□□□□□ -1.7
CUL3-214ENST00000541548 NUP133Q8WUM0 1156 aa4.44□□□□□ -1.7
CUL3-214ENST00000541548 BOD1Q96IK1 185 aa4.44□□□□□ -1.7
CUL3-214ENST00000541548 COQ10AQ96MF6 247 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms