RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 LILRA6Q6PI73 481 aa11.32□□□□□ -0.6
CDCA3-208ENST00000540683 MTSS1LQ765P7 747 aa11.32□□□□□ -0.6
CDCA3-208ENST00000540683 USP37Q86T82 979 aa11.32□□□□□ -0.6
CDCA3-208ENST00000540683 LEMD2Q8NC56 503 aa11.32□□□□□ -0.6
CDCA3-208ENST00000540683 BEST2Q8NFU1 509 aa11.32□□□□□ -0.6
CDCA3-208ENST00000540683 LNX1Q8TBB1 728 aaPredicted RBP11.32□□□□□ -0.6
CDCA3-208ENST00000540683 HASPINQ8TF76 798 aa11.32□□□□□ -0.6
CDCA3-208ENST00000540683 SNX21Q969T3 373 aa11.32□□□□□ -0.6
CDCA3-208ENST00000540683 PLIN2Q99541 437 aa11.32□□□□□ -0.6
CDCA3-208ENST00000540683 REEP2Q9BRK0 252 aa11.32□□□□□ -0.6
CDCA3-208ENST00000540683 RPF1Q9H9Y2 349 aaKnown RBP11.32□□□□□ -0.6
CDCA3-208ENST00000540683 MTRRQ9UBK8 725 aa11.32□□□□□ -0.6
CDCA3-208ENST00000540683 KCNH3Q9ULD8 1083 aa11.32□□□□□ -0.6
CDCA3-208ENST00000540683 PCDHB13Q9Y5F0 798 aa11.32□□□□□ -0.6
CDCA3-208ENST00000540683 TRIOO75962 3097 aa11.32□□□□□ -0.6
CDCA3-208ENST00000540683 ZNF197O14709 1029 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 LDHAP00338 332 aaKnown RBP11.31□□□□□ -0.6
CDCA3-208ENST00000540683 LRG1P02750 347 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 C8AP07357 584 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 HARSP12081 509 aaKnown RBP11.31□□□□□ -0.6
CDCA3-208ENST00000540683 FSHRP23945 695 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 MCM4P33991 863 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 STAT6P42226 847 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 GTF2BQ00403 316 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 PLD1Q13393 1074 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 DHX8Q14562 1220 aaKnown RBP11.31□□□□□ -0.6
CDCA3-208ENST00000540683 SLC39A14Q15043 492 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 KARSQ15046 597 aaKnown RBP11.31□□□□□ -0.6
CDCA3-208ENST00000540683 STK38Q15208 465 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 GLRA4Q5JXX5 417 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 AXDND1Q5T1B0 1012 aaPredicted RBP11.31□□□□□ -0.6
CDCA3-208ENST00000540683 SLC8B1Q6J4K2 584 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 NT5DC4Q86YG4 428 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 ZNF461Q8TAF7 563 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 SHDQ96IW2 340 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 MSTO1Q9BUK6 570 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 ASB7Q9H672 318 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 MAGEF1Q9HAY2 307 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 FBXL21Q9UKT6 434 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 DSEQ9UL01 958 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 DENND4AQ7Z401 1863 aa11.31□□□□□ -0.6
CDCA3-208ENST00000540683 PRRG1O14668 218 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 KIAA0391O15091 583 aaKnown RBP11.3□□□□□ -0.6
CDCA3-208ENST00000540683 PPP6R2O75170 966 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 SP100P23497 879 aaPredicted RBP11.3□□□□□ -0.6
CDCA3-208ENST00000540683 LRPAP1P30533 357 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 OR1D2P34982 312 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 CLCN5P51795 746 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 MCM6Q14566 821 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 ARSHQ5FYA8 562 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 PRSS55Q6UWB4 352 aaPredicted RBP11.3□□□□□ -0.6
CDCA3-208ENST00000540683 TAS1R3Q7RTX0 852 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 MAP4K3Q8IVH8 894 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 GLYCTKQ8IVS8 523 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 CCDC65Q8IXS2 484 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 KIF12Q96FN5 646 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 SUSD3Q96L08 255 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 CLSTN3Q9BQT9 956 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 PAAF1Q9BRP4 392 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 MRPL44Q9H9J2 332 aaKnown RBP11.3□□□□□ -0.6
CDCA3-208ENST00000540683 KCNK12Q9HB15 430 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 POLD4Q9HCU8 107 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 BLOC1S4Q9NUP1 217 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 WNT16Q9UBV4 365 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 CFAP45Q9UL16 551 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 DUSP12Q9UNI6 340 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 R3HCC1Q9Y3T6 440 aaKnown RBP11.3□□□□□ -0.6
CDCA3-208ENST00000540683 CDY1Q9Y6F8 540 aa11.3□□□□□ -0.6
CDCA3-208ENST00000540683 TTC26A0AVF1 554 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 OR6C75A6NL08 312 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 ABLIM1O14639 778 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 IL18RAPO95256 599 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 YEATS4O95619 227 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 FGF19O95750 216 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 EDN1P05305 212 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 WEE2P0C1S8 567 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 SRFP11831 508 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 ATF2P15336 505 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 PFKPQ01813 784 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 YWHAHQ04917 246 aaPredicted RBP11.29□□□□□ -0.6
CDCA3-208ENST00000540683 RESTQ13127 1097 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 PTPAQ15257 358 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 SLC10A6Q3KNW5 377 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 CTXN3Q4LDR2 81 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 VARS2Q5ST30 1063 aaKnown RBP11.29□□□□□ -0.6
CDCA3-208ENST00000540683 ADALQ6DHV7 355 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 IQCEQ6IPM2 695 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 SYCP3Q8IZU3 236 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 IQUBQ8NA54 791 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 SLC7A14Q8TBB6 771 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 KCNG4Q8TDN1 519 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 KCNV2Q8TDN2 545 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 CACTINQ8WUQ7 758 aaKnown RBP11.29□□□□□ -0.6
CDCA3-208ENST00000540683 ZNF707Q96C28 371 aaPredicted RBP11.29□□□□□ -0.6
CDCA3-208ENST00000540683 ASIC4Q96FT7 647 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 B3GALT6Q96L58 329 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 ACCSQ96QU6 501 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 RTP3Q9BQQ7 232 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 TMEM206Q9H813 350 aa11.29□□□□□ -0.6
CDCA3-208ENST00000540683 AVENQ9NQS1 362 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms