RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 USP37Q86T82 979 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 GDAP1Q8TB36 358 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 TRIM11Q96F44 468 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 TGS1Q96RS0 853 aaKnown RBP13.09□□□□□ -0.31
NPC1-202ENST00000540608 TRIM7Q9C029 511 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 ARHGEF3Q9NR81 526 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 TOPORSQ9NS56 1045 aaPredicted RBP13.09□□□□□ -0.31
NPC1-202ENST00000540608 DNAJC17Q9NVM6 304 aaKnown RBP13.09□□□□□ -0.31
NPC1-202ENST00000540608 CCPG1Q9ULG6 757 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 ACTL7BQ9Y614 415 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 IGF2BP3O00425 579 aaKnown RBP eCLIP13.09□□□□□ -0.31
NPC1-202ENST00000540608 CDH16O75309 829 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 ICAM1P05362 532 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 PTGER2P43116 358 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 ALDH5A1P51649 535 aaPredicted RBP13.09□□□□□ -0.31
NPC1-202ENST00000540608 KLF1Q13351 362 aaPredicted RBP13.09□□□□□ -0.31
NPC1-202ENST00000540608 CCNG2Q16589 344 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 UGCGQ16739 394 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 ACCSLQ4AC99 568 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 PCNX4Q63HM2 1172 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 FITM2Q8N6M3 262 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 SUPT20HQ8NEM7 779 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 KLHL29Q96CT2 875 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 FAM212AQ96EL1 285 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 IFT74Q96LB3 600 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 CCDC77Q9BR77 488 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 ANKEF1Q9NU02 776 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 DONSONQ9NYP3 566 aa13.09□□□□□ -0.31
NPC1-202ENST00000540608 R3HDM2Q9Y2K5 976 aaKnown RBP13.09□□□□□ -0.31
NPC1-202ENST00000540608 NFIBO00712 420 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 POTEJP0CG39 1038 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 CETPP11597 493 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 RRM1P23921 792 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 CAP2P40123 477 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 NPTX2P47972 431 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 PSMC5P62195 406 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 MRPS9P82933 396 aaKnown RBP13.08□□□□□ -0.32
NPC1-202ENST00000540608 CYP24A1Q07973 514 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 MTMR1Q13613 665 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 STAT4Q14765 748 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 TBC1D10BQ4KMP7 808 aaPredicted RBP13.08□□□□□ -0.32
NPC1-202ENST00000540608 RNF43Q68DV7 783 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 ASRGL1Q7L266 308 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 ZNF677Q86XU0 584 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 CCDC89Q8N998 374 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 CLEC4DQ8WXI8 215 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 GRAMD1AQ96CP6 724 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 STAMBPL1Q96FJ0 436 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 L3MBTL3Q96JM7 780 aaPredicted RBP13.08□□□□□ -0.32
NPC1-202ENST00000540608 PWWP2AQ96N64 755 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 GMLQ99445 158 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 NKIRAS1Q9NYS0 192 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 ZC3H11AO75152 810 aaKnown RBP eCLIP13.08□□□□□ -0.32
NPC1-202ENST00000540608 ANP32DO95626 131 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 ENPEPQ07075 957 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 STRN3Q13033 797 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 XKR9Q5GH70 373 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 PPP1R21Q6ZMI0 780 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 AGAP11Q8TF27 550 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 CPA5Q8WXQ8 436 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 ELMO3Q96BJ8 720 aa13.08□□□□□ -0.32
NPC1-202ENST00000540608 NTPCRQ9BSD7 190 aaKnown RBP13.08□□□□□ -0.32
NPC1-202ENST00000540608 MYPNQ86TC9 1320 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 DENND3A2RUS2 1198 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 KIF1CO43896 1103 aaKnown RBP13.07□□□□□ -0.32
NPC1-202ENST00000540608 PROSCO94903 275 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 CALCAP01258 141 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 RALAP11233 206 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 GBP2P32456 591 aaPredicted RBP13.07□□□□□ -0.32
NPC1-202ENST00000540608 DMP1Q13316 513 aaPredicted RBP13.07□□□□□ -0.32
NPC1-202ENST00000540608 ACVR2BQ13705 512 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 MTFR1Q15390 333 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 CGB2Q6NT52 195 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 ZNF365Q70YC5 407 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 MCF2L2Q86YR7 1114 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 ANKRD35Q8N283 1001 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 EURLQ9NYK6 297 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 KLHL14Q9P2G3 628 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 TBK1Q9UHD2 729 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 PNMA3Q9UL41 463 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 SCAF8Q9UPN6 1271 aaKnown RBP13.07□□□□□ -0.32
NPC1-202ENST00000540608 L3MBTL1Q9Y468 752 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 PCDHB2Q9Y5E7 798 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 COL4A5P29400 1685 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 PSME4Q14997 1843 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 KRT16P08779 473 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 TAC1P20366 129 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 CCND1P24385 295 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 VPS41P49754 854 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 GHRHRQ02643 423 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 CRYMQ14894 314 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 SLC39A4Q6P5W5 647 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 SRRM1Q8IYB3 904 aaKnown RBP13.07□□□□□ -0.32
NPC1-202ENST00000540608 OGFOD1Q8N543 542 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 POMGNT1Q8WZA1 660 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 MIEF2Q96C03 454 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 RSRC1Q96IZ7 334 aaKnown RBP13.07□□□□□ -0.32
NPC1-202ENST00000540608 CAMKK2Q96RR4 588 aa13.07□□□□□ -0.32
NPC1-202ENST00000540608 PI4K2AQ9BTU6 479 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms