RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 NT5C3AQ9H0P0 336 aa8.1□□□□□ -1.11
NECAP1-204ENST00000540083 TUT1Q9H6E5 874 aaKnown RBP8.1□□□□□ -1.11
NECAP1-204ENST00000540083 TRPV5Q9NQA5 729 aa8.1□□□□□ -1.11
NECAP1-204ENST00000540083 ZNF302Q9NR11 478 aa8.1□□□□□ -1.11
NECAP1-204ENST00000540083 LMCD1Q9NZU5 365 aa8.1□□□□□ -1.11
NECAP1-204ENST00000540083 PRKAG2Q9UGJ0 569 aa8.1□□□□□ -1.11
NECAP1-204ENST00000540083 NR2E3Q9Y5X4 410 aa8.1□□□□□ -1.11
NECAP1-204ENST00000540083 NRCAMQ92823 1304 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 A0A1W2PQ45 241 aaPredicted RBP8.09□□□□□ -1.11
NECAP1-204ENST00000540083 A0A1W2PQY0 241 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 ANO9A1A5B4 782 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 A6NJY4 79 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 HMGB1P1B2RPK0 211 aaPredicted RBP8.09□□□□□ -1.11
NECAP1-204ENST00000540083 KIF28PB7ZC32 967 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 ANKRD65E5RJM6 399 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 DDX39AO00148 427 aaKnown RBP8.09□□□□□ -1.11
NECAP1-204ENST00000540083 ARVCFO00192 962 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 CDK2AP1O14519 115 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 DHX15O43143 795 aaKnown RBP8.09□□□□□ -1.11
NECAP1-204ENST00000540083 SLC37A4O43826 429 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 CREB3O43889 395 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 HBP1O60381 514 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 PPP6R2O75170 966 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 LGR5O75473 907 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 F2P00734 622 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 LGALS2P05162 132 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 PAEPP09466 180 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 EN2P19622 333 aaPredicted RBP8.09□□□□□ -1.11
NECAP1-204ENST00000540083 LONP1P36776 959 aaKnown RBP8.09□□□□□ -1.11
NECAP1-204ENST00000540083 QARSP47897 775 aaKnown RBP8.09□□□□□ -1.11
NECAP1-204ENST00000540083 PSMD7P51665 324 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 PSMC5P62195 406 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 ATP2C1P98194 919 aaPredicted RBP8.09□□□□□ -1.11
NECAP1-204ENST00000540083 CDC42EP1Q00587 391 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 BEX3Q00994 111 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 AMPD2Q01433 879 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 SP4Q02446 784 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 ITGB3BPQ13352 177 aaPredicted RBP8.09□□□□□ -1.11
NECAP1-204ENST00000540083 ITGA7Q13683 1181 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 STK38Q15208 465 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 IFI16Q16666 785 aaKnown RBP8.09□□□□□ -1.11
NECAP1-204ENST00000540083 EARS2Q5JPH6 523 aaKnown RBP8.09□□□□□ -1.11
NECAP1-204ENST00000540083 ZNF484Q5JVG2 852 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 KRT79Q5XKE5 535 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 SPECC1LQ69YQ0 1117 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 ADALQ6DHV7 355 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 CCSAPQ6IQ19 270 aaPredicted RBP8.09□□□□□ -1.11
NECAP1-204ENST00000540083 CXCL17Q6UXB2 119 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 ABHD15Q6UXT9 468 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 SLC39A5Q6ZMH5 540 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 LCA5Q86VQ0 697 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 MREGQ8N565 214 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 EIF1ADQ8N9N8 165 aaKnown RBP8.09□□□□□ -1.11
NECAP1-204ENST00000540083 TBC1D31Q96DN5 1066 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 PAWRQ96IZ0 340 aaKnown RBP8.09□□□□□ -1.11
NECAP1-204ENST00000540083 RBM41Q96IZ5 413 aaKnown RBP8.09□□□□□ -1.11
NECAP1-204ENST00000540083 CDK5RAP3Q96JB5 506 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 CCDC43Q96MW1 224 aaKnown RBP8.09□□□□□ -1.11
NECAP1-204ENST00000540083 TOX2Q96NM4 488 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 NIFKQ9BYG3 293 aaKnown RBP8.09□□□□□ -1.11
NECAP1-204ENST00000540083 ZSWIM4Q9H7M6 989 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 TUFT1Q9NNX1 390 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 ZFATQ9P243 1243 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 LRWD1Q9UFC0 647 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 SUN2Q9UH99 717 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 TUBE1Q9UJT0 475 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 PCDHB6Q9Y5E3 794 aa8.09□□□□□ -1.11
NECAP1-204ENST00000540083 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.09□□□□□ -1.11
NECAP1-204ENST00000540083 COL1A2P08123 1366 aa8.09□□□□□ -1.12
NECAP1-204ENST00000540083 ITIH6Q6UXX5 1313 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 KDM3AQ9Y4C1 1321 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 IGKV6D-21A0A0A0MT36 114 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 GSTTP1A0A1W2PQM5 241 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 AGPSO00116 658 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 ADAMTS3O15072 1205 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 MAGEB2O15479 319 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 ADCY6O43306 1168 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 GAS2O43903 313 aaKnown RBP8.08□□□□□ -1.12
NECAP1-204ENST00000540083 DTNBO60941 627 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 RNF8O76064 485 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 PARNO95453 639 aaKnown RBP8.08□□□□□ -1.12
NECAP1-204ENST00000540083 ATP6V1G2O95670 118 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 GSTA2P09210 222 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 COL6A1P12109 1028 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 IDO1P14902 403 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 TMOD1P28289 359 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 LSP1P33241 339 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 UBA7P41226 1012 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 TECP42680 631 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 TOB1P50616 345 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-204ENST00000540083 EPHB4P54760 987 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 SOX10P56693 466 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 TRIM14Q14142 442 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 GAS6Q14393 721 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 SLC39A14Q15043 492 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 PTGISQ16647 500 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 ANKRD20A8PQ5CZ79 823 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 XKR3Q5GH77 459 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 FAM47CQ5HY64 1035 aa8.08□□□□□ -1.12
NECAP1-204ENST00000540083 SPECC1Q5M775 1068 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms