RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 PDAP1Q13442 181 aaKnown RBP6.82□□□□□ -1.32
LSAMP-207ENST00000539563 BYSLQ13895 437 aaKnown RBP6.82□□□□□ -1.32
LSAMP-207ENST00000539563 TERF2Q15554 542 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 CHST13Q8NET6 341 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 REEP2Q9BRK0 252 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 PRR12Q9ULL5 1215 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 SPATA31A6Q5VVP1 1343 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 EXTL3O43909 919 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 TRIM49P0CI25 452 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 TRIM49CP0CI26 452 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 COG1Q8WTW3 980 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 FAM151AQ8WW52 585 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 THOC1Q96FV9 657 aaKnown RBP6.82□□□□□ -1.32
LSAMP-207ENST00000539563 RIT2Q99578 217 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 DCTN4Q9UJW0 460 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 FAM95CA0A1B0GW59 222 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 CFAP69A5D8W1 941 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 KIF28PB7ZC32 967 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 CHGBP05060 677 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 SNRNP35Q16560 246 aaKnown RBP6.82□□□□□ -1.32
LSAMP-207ENST00000539563 TAS2R42Q7RTR8 314 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 METTL16Q86W50 562 aaKnown RBP6.82□□□□□ -1.32
LSAMP-207ENST00000539563 GLYCTKQ8IVS8 523 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 MFN1Q8IWA4 741 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 PPP2R3CQ969Q6 453 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 TSC22D3Q99576 134 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 NT5C1AQ9BXI3 368 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 SLC7A5P2Q9GIP4 190 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 MAD2L2Q9UI95 211 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 MORC2Q9Y6X9 1032 aaPredicted RBP6.82□□□□□ -1.32
LSAMP-207ENST00000539563 CCDC195A0A1B0GUA6 201 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 ARHGAP10A1A4S6 786 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 ATP9BO43861 1147 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 RPS12P25398 132 aaKnown RBP6.82□□□□□ -1.32
LSAMP-207ENST00000539563 GUCY1A2P33402 732 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 CPT1AP50416 773 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 HNRNPH2P55795 449 aaKnown RBP6.82□□□□□ -1.32
LSAMP-207ENST00000539563 KRT72Q14CN4 511 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 DDIASQ8IXT1 998 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 SYN2Q92777 582 aaPredicted RBP6.82□□□□□ -1.32
LSAMP-207ENST00000539563 PARK7Q99497 189 aaKnown RBP6.82□□□□□ -1.32
LSAMP-207ENST00000539563 MKNK1Q9BUB5 465 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 ZFATQ9P243 1243 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 PAK5Q9P286 719 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 NBPF26B4DH59 902 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 MTSS1O43312 755 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 MYCP01106 439 aaPredicted RBP6.82□□□□□ -1.32
LSAMP-207ENST00000539563 APRTP07741 180 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 MRPS25P82663 173 aaKnown RBP6.82□□□□□ -1.32
LSAMP-207ENST00000539563 BAATQ14032 418 aaPredicted RBP6.82□□□□□ -1.32
LSAMP-207ENST00000539563 ADSSL1Q8N142 457 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 NBPF15Q8N660 670 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 MOV10L1Q9BXT6 1211 aaKnown RBP6.82□□□□□ -1.32
LSAMP-207ENST00000539563 MTIF3Q9H2K0 278 aaKnown RBP6.82□□□□□ -1.32
LSAMP-207ENST00000539563 ZFYVE28Q9HCC9 887 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 PRMT7Q9NVM4 692 aaPredicted RBP6.82□□□□□ -1.32
LSAMP-207ENST00000539563 AMACRQ9UHK6 382 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 PTPRUQ92729 1446 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 INO80Q9ULG1 1556 aaPredicted RBP6.82□□□□□ -1.32
LSAMP-207ENST00000539563 RIMS1Q86UR5 1692 aaKnown RBP6.82□□□□□ -1.32
LSAMP-207ENST00000539563 ZBTB7AO95365 584 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 AGBL2Q5U5Z8 902 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 RRM2BQ7LG56 351 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 PRUNE1Q86TP1 453 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 ARHGAP18Q8N392 663 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 SH3KBP1Q96B97 665 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 ERAP1Q9NZ08 941 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 AIPL1Q9NZN9 384 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 PCDHB2Q9Y5E7 798 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 RNF103-CHMP3A0A140T963 221 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 PRPF4O43172 522 aaKnown RBP eCLIP6.81□□□□□ -1.32
LSAMP-207ENST00000539563 GFAPP14136 432 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 RPA1P27694 616 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 HMGCS2P54868 508 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 ST8SIA6P61647 398 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 ZNF200P98182 395 aaPredicted RBP6.81□□□□□ -1.32
LSAMP-207ENST00000539563 LBRQ14739 615 aaKnown RBP6.81□□□□□ -1.32
LSAMP-207ENST00000539563 DCAF4L1Q3SXM0 396 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 TMEM259Q4ZIN3 620 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 LRRC23Q53EV4 343 aaPredicted RBP6.81□□□□□ -1.32
LSAMP-207ENST00000539563 CDC42EP5Q6NZY7 148 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 HIPK4Q8NE63 616 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 FBXL5Q9UKA1 691 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 DAGLAQ9Y4D2 1042 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 ITGA4P13612 1032 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 UCHL3P15374 230 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 PCSK1P29120 753 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 FLOT2Q14254 428 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 DGKDQ16760 1214 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 TTC39BQ5VTQ0 682 aaPredicted RBP6.81□□□□□ -1.32
LSAMP-207ENST00000539563 ATPAF2Q8N5M1 289 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 TEKT4Q8WW24 435 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 RAB6BQ9NRW1 208 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 HDAC6Q9UBN7 1215 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 FER1L4A9Z1Z3 1794 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 NDUFS3O75489 264 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 SSTR3P32745 418 aaPredicted RBP6.81□□□□□ -1.32
LSAMP-207ENST00000539563 ACOT2P49753 483 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 LAMC2Q13753 1193 aa6.81□□□□□ -1.32
LSAMP-207ENST00000539563 INPP5AQ14642 412 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms