RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 ERVK-5Q9HDB9 667 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 NLRC4Q9NPP4 1024 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 RNF19AQ9NV58 838 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 TMEM39AQ9NV64 488 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 SNTG2Q9NY99 539 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 CAPN11Q9UMQ6 739 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 ST3GAL5Q9UNP4 418 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 HES2Q9Y543 173 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 FHOD1Q9Y613 1164 aa9.93□□□□□ -0.82
RTN4IP1-204ENST00000539449 GTPBP10A4D1E9 387 aaKnown RBP9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 MGEA5O60502 916 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 PQBP1O60828 265 aaKnown RBP9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 RPS6KA5O75582 802 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 VNN1O95497 513 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 GHRP10912 638 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 CKBP12277 381 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 SFPQP23246 707 aaKnown RBP eCLIP9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 CD52P31358 61 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 MXI1P50539 228 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 GSDMDP57764 484 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 POLR2FP61218 127 aaKnown RBP9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 GPNMBQ14956 572 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 FIGNQ5HY92 759 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 KLHDC7AQ5VTJ3 777 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 TDRD10Q5VZ19 366 aaKnown RBP9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 IQCEQ6IPM2 695 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 PHLDB3Q6NSJ2 640 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 WDR59Q6PJI9 974 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 RSPH3Q86UC2 560 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 C17orf53Q8N3J3 647 aaPredicted RBP9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 SMG8Q8ND04 991 aaKnown RBP9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 NEK11Q8NG66 645 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 KAT5Q92993 513 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 TATDN2Q93075 761 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 TRIM44Q96DX7 344 aaPredicted RBP9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 CHP1Q99653 195 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 PI4K2AQ9BTU6 479 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 RPF1Q9H9Y2 349 aaKnown RBP9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 TMEM8AQ9HCN3 771 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 PLCB1Q9NQ66 1216 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 GCNT4Q9P109 453 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 PIN4Q9Y237 131 aaKnown RBP9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 NOD1Q9Y239 953 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 YBX2Q9Y2T7 364 aaKnown RBP9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 COQ4Q9Y3A0 265 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 TET1Q8NFU7 2136 aa9.92□□□□□ -0.82
RTN4IP1-204ENST00000539449 BRWD1Q9NSI6 2320 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 UMODL1Q5DID0 1318 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 MEIS3P2A8K0S8 358 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 M0QZ92 97 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 PMM2O15305 246 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 CST3P01034 146 aaPredicted RBP9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 HLA-DRAP01903 254 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 NFICP08651 508 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 CLTAP09496 248 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 PNMA6AP0CW24 399 aaPredicted RBP9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 TNNI1P19237 187 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 TRIM21P19474 475 aaKnown RBP9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 FECHP22830 423 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 AXLP30530 894 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 GRM5P41594 1212 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 GUCY2FP51841 1108 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 ENPEPQ07075 957 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 NFX1Q12986 1120 aaKnown RBP9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 DSC3Q14574 896 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 MTF1Q14872 753 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 TCTN1Q2MV58 587 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 HS1BP3Q53T59 392 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 KRT39Q6A163 491 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 NOTUMQ6P988 496 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 PDXDC1Q6P996 788 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 SLC27A1Q6PCB7 646 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 TRIM65Q6PJ69 517 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 CCDC150Q8NCX0 1101 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 FNBP1Q96RU3 617 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 NUP58Q9BVL2 599 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 APOL6Q9BWW8 343 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 NAA15Q9BXJ9 866 aaKnown RBP9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 NXF3Q9H4D5 531 aaKnown RBP9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 ABHD10Q9NUJ1 306 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 KLK14Q9P0G3 267 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 PADI3Q9ULW8 664 aa9.91□□□□□ -0.82
RTN4IP1-204ENST00000539449 MROH7Q68CQ1 1323 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 TANC1Q9C0D5 1861 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 A0A1W2PQJ5 194 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 LRRC53A6NM62 1247 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 P4HA2O15460 535 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 N4BP1O75113 896 aaKnown RBP9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 TIMP1P01033 207 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 SKILP12757 684 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 UCHL3P15374 230 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 AKAP5P24588 427 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 GTF2H1P32780 548 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 ZBED6P86452 979 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 FAAP100Q0VG06 881 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 PPIGQ13427 754 aaKnown RBP eCLIP9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 TRIM14Q14142 442 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 DCAF4L1Q3SXM0 396 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 ZACNQ401N2 412 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 JADE1Q6IE81 842 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms