RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 PCDHA3Q9Y5H8 950 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 OGTO15294 1046 aa16.75■□□□□ 0.27
MKS1-204ENST00000537529 DAPK3O43293 454 aa16.75■□□□□ 0.27
MKS1-204ENST00000537529 CALCAP01258 141 aa16.75■□□□□ 0.27
MKS1-204ENST00000537529 TXNP10599 105 aaKnown RBP16.75■□□□□ 0.27
MKS1-204ENST00000537529 YBX3P16989 372 aaKnown RBP eCLIP16.75■□□□□ 0.279e-6■□□□□ 10.4
MKS1-204ENST00000537529 CHRNA3P32297 505 aa16.75■□□□□ 0.27
MKS1-204ENST00000537529 CENPCQ03188 943 aa16.75■□□□□ 0.27
MKS1-204ENST00000537529 MKRN4PQ13434 485 aaPredicted RBP16.75■□□□□ 0.27
MKS1-204ENST00000537529 TTLL4Q14679 1199 aa16.75■□□□□ 0.27
MKS1-204ENST00000537529 SURF1Q15526 300 aa16.75■□□□□ 0.27
MKS1-204ENST00000537529 LEKR1Q6ZMV7 388 aa16.75■□□□□ 0.27
MKS1-204ENST00000537529 ZBTB33Q86T24 672 aa16.75■□□□□ 0.27
MKS1-204ENST00000537529 DDX42Q86XP3 938 aaKnown RBP eCLIP16.75■□□□□ 0.27
MKS1-204ENST00000537529 CD302Q8IX05 232 aa16.75■□□□□ 0.27
MKS1-204ENST00000537529 LRRC71Q8N4P6 559 aa16.75■□□□□ 0.27
MKS1-204ENST00000537529 ERVK-5Q9HDB9 667 aa16.75■□□□□ 0.27
MKS1-204ENST00000537529 PNMA3Q9UL41 463 aa16.75■□□□□ 0.27
MKS1-204ENST00000537529 CNTN6Q9UQ52 1028 aa16.75■□□□□ 0.27
MKS1-204ENST00000537529 CYP1A1P04798 512 aaPredicted RBP16.74■□□□□ 0.27
MKS1-204ENST00000537529 MAPK4P31152 587 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 RWDD2BP57060 319 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 MCL1Q07820 350 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 SEZ6Q53EL9 994 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 LIN9Q5TKA1 542 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 RBBP8NLQ8NC74 664 aaPredicted RBP16.74■□□□□ 0.27
MKS1-204ENST00000537529 PLVAPQ9BX97 442 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 ANAPC7Q9UJX3 599 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 MTUS1Q9ULD2 1270 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 TTLL13PA6NNM8 815 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 FAM189A1O60320 539 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 HBP1O60381 514 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 GNA15P30679 374 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 MTMR3Q13615 1198 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 AADACL2Q6P093 401 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 TMEM270Q6UE05 265 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 LRIG3Q6UXM1 1119 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 EFCAB13Q8IY85 973 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 CPA5Q8WXQ8 436 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 PIK3R5Q8WYR1 880 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 RUNDC3BQ96NL0 473 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 TRIM51Q9BSJ1 452 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 DPH5Q9H2P9 285 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 NUB1Q9Y5A7 615 aa16.74■□□□□ 0.27
MKS1-204ENST00000537529 PYGMP11217 842 aa16.73■□□□□ 0.27
MKS1-204ENST00000537529 ACTN2P35609 894 aa16.73■□□□□ 0.27
MKS1-204ENST00000537529 TNFSF9P41273 254 aa16.73■□□□□ 0.27
MKS1-204ENST00000537529 MON1BQ7L1V2 547 aa16.73■□□□□ 0.27
MKS1-204ENST00000537529 RHPN2Q8IUC4 686 aa16.73■□□□□ 0.27
MKS1-204ENST00000537529 ABRAQ8N0Z2 381 aa16.73■□□□□ 0.27
MKS1-204ENST00000537529 NEUROG2Q9H2A3 272 aa16.73■□□□□ 0.27
MKS1-204ENST00000537529 UMODL1Q5DID0 1318 aa16.73■□□□□ 0.27
MKS1-204ENST00000537529 GJA5P36382 358 aa16.73■□□□□ 0.27
MKS1-204ENST00000537529 SLC1A1P43005 524 aa16.73■□□□□ 0.27
MKS1-204ENST00000537529 LDLRAD1Q5T700 205 aa16.73■□□□□ 0.27
MKS1-204ENST00000537529 MPZL3Q6UWV2 235 aa16.73■□□□□ 0.27
MKS1-204ENST00000537529 SLC13A5Q86YT5 568 aaPredicted RBP16.73■□□□□ 0.27
MKS1-204ENST00000537529 JAMLQ86YT9 394 aa16.73■□□□□ 0.27
MKS1-204ENST00000537529 PRELID2Q8N945 189 aa16.73■□□□□ 0.27
MKS1-204ENST00000537529 COPS5Q92905 334 aa16.73■□□□□ 0.27
MKS1-204ENST00000537529 MAGOHBQ96A72 148 aaKnown RBP16.73■□□□□ 0.27
MKS1-204ENST00000537529 ERP44Q9BS26 406 aa16.73■□□□□ 0.27
MKS1-204ENST00000537529 SYT17Q9BSW7 474 aa16.73■□□□□ 0.27
MKS1-204ENST00000537529 CPSF3Q9UKF6 684 aaKnown RBP16.73■□□□□ 0.27
MKS1-204ENST00000537529 PLAAQ9Y263 795 aa16.73■□□□□ 0.27
MKS1-204ENST00000537529 MROH7Q68CQ1 1323 aa16.72■□□□□ 0.27
MKS1-204ENST00000537529 ASS1P00966 412 aaKnown RBP16.72■□□□□ 0.27
MKS1-204ENST00000537529 RRM1P23921 792 aa16.72■□□□□ 0.27
MKS1-204ENST00000537529 HSD17B3P37058 310 aa16.72■□□□□ 0.27
MKS1-204ENST00000537529 NOMO3P69849 1222 aa16.72■□□□□ 0.27
MKS1-204ENST00000537529 CCNA1P78396 465 aa16.72■□□□□ 0.27
MKS1-204ENST00000537529 TTMPQ5BVD1 217 aa16.72■□□□□ 0.27
MKS1-204ENST00000537529 DUPD1Q68J44 220 aa16.72■□□□□ 0.27
MKS1-204ENST00000537529 TSHZ1Q6ZSZ6 1077 aa16.72■□□□□ 0.27
MKS1-204ENST00000537529 CPNE8Q86YQ8 564 aa16.72■□□□□ 0.27
MKS1-204ENST00000537529 ARL8AQ96BM9 186 aa16.72■□□□□ 0.27
MKS1-204ENST00000537529 SLC10A4Q96EP9 437 aa16.72■□□□□ 0.27
MKS1-204ENST00000537529 CYFIP2Q96F07 1278 aa16.72■□□□□ 0.27
MKS1-204ENST00000537529 VCPIP1Q96JH7 1222 aa16.72■□□□□ 0.27
MKS1-204ENST00000537529 PCYOX1Q9UHG3 505 aa16.72■□□□□ 0.27
MKS1-204ENST00000537529 ZNFX1Q9P2E3 1918 aaKnown RBP16.72■□□□□ 0.27
MKS1-204ENST00000537529 ACKR2O00590 384 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 ABLIM1O14639 778 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 ASAP2O43150 1006 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 THAP12O43422 761 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 ERLIN2O94905 339 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 GBP1P32455 592 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 CYP1B1Q16678 543 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 DUOXA2Q1HG44 320 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 TMEM132AQ24JP5 1023 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 EAPPQ56P03 285 aaPredicted RBP16.71■□□□□ 0.27
MKS1-204ENST00000537529 ATF7IP2Q5U623 682 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 SMYD5Q6GMV2 418 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 ARMCX2Q7L311 632 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 UBR7Q8N806 425 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 C1orf131Q8NDD1 294 aaKnown RBP16.71■□□□□ 0.27
MKS1-204ENST00000537529 TRAPPC12Q8WVT3 735 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 FAM212AQ96EL1 285 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 NLRP4Q96MN2 994 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 MTMR12Q9C0I1 747 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms