RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 FOXN1O15353 648 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 DGKIO75912 1065 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 NPTXRO95502 500 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 LDHAP00338 332 aaKnown RBP12.4□□□□□ -0.42
POLR1B-216ENST00000537335 CFBP00751 764 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 MYL2P10916 166 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 BNC1Q01954 994 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 LBRQ14739 615 aaKnown RBP12.4□□□□□ -0.42
POLR1B-216ENST00000537335 EAPPQ56P03 285 aaPredicted RBP12.4□□□□□ -0.42
POLR1B-216ENST00000537335 PERM1Q5SV97 790 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 ATG14Q6ZNE5 492 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 GLYCTKQ8IVS8 523 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 NARS2Q96I59 477 aaKnown RBP12.4□□□□□ -0.42
POLR1B-216ENST00000537335 PPP1R36Q96LQ0 422 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 TMEM237Q96Q45 408 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 SAR1AQ9NR31 198 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 CDK13Q14004 1512 aaKnown RBP12.4□□□□□ -0.43
POLR1B-216ENST00000537335 SPAG6O75602 509 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 PAMP19021 973 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 PSMA2P25787 234 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 MAGEA8P43361 318 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 GSCP56915 257 aaPredicted RBP12.39□□□□□ -0.43
POLR1B-216ENST00000537335 PSMC6P62333 389 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 PUDPQ08623 228 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 PTK7Q13308 1070 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 BFSP2Q13515 415 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 COG2Q14746 738 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 ANGPT1Q15389 498 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 ARHGAP17Q68EM7 881 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 TTC8Q8TAM2 541 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 ANKS1AQ92625 1134 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 KLF6Q99612 283 aaPredicted RBP12.39□□□□□ -0.43
POLR1B-216ENST00000537335 MAST3O60307 1309 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 PTGS2P35354 604 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 USP11P51784 963 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 DMP1Q13316 513 aaPredicted RBP12.39□□□□□ -0.43
POLR1B-216ENST00000537335 CHI3L2Q15782 390 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 COX4I2Q96KJ9 171 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 EFCAB1Q9HAE3 211 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 SYTL2Q9HCH5 934 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 AGPAT5Q9NUQ2 364 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 RBMX2Q9Y388 322 aaKnown RBP12.39□□□□□ -0.43
POLR1B-216ENST00000537335 RTCBQ9Y3I0 505 aaKnown RBP12.39□□□□□ -0.43
POLR1B-216ENST00000537335 GPC6Q9Y625 555 aaPredicted RBP12.39□□□□□ -0.43
POLR1B-216ENST00000537335 FLT4P35916 1363 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 ABCC2Q92887 1545 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 ARHGEF12Q9NZN5 1544 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 PRPF3O43395 683 aaKnown RBP12.39□□□□□ -0.43
POLR1B-216ENST00000537335 SMNDC1O75940 238 aaKnown RBP eCLIP12.39□□□□□ -0.43
POLR1B-216ENST00000537335 SNRPAP09012 282 aaKnown RBP12.39□□□□□ -0.43
POLR1B-216ENST00000537335 ZNF23P17027 643 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 RIPK1Q13546 671 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 NAB2Q15742 525 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 NEDD8Q15843 81 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 ACCSLQ4AC99 568 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 TBC1D10BQ4KMP7 808 aaPredicted RBP12.39□□□□□ -0.43
POLR1B-216ENST00000537335 TAF2Q6P1X5 1199 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 KLHL17Q6TDP4 642 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 DDIASQ8IXT1 998 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 ENKURQ8TC29 256 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 PLEKHG4BQ96PX9 1271 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 UBE2OQ9C0C9 1292 aaKnown RBP12.39□□□□□ -0.43
POLR1B-216ENST00000537335 EMC3Q9P0I2 261 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 CDYLQ9Y232 598 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 VWA5AO00534 786 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 MED7O43513 233 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 RARGP13631 454 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 LIFRP42702 1097 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 TUFMP49411 452 aaKnown RBP12.39□□□□□ -0.43
POLR1B-216ENST00000537335 TAB1Q15750 504 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 FASTKD1Q53R41 847 aaKnown RBP12.39□□□□□ -0.43
POLR1B-216ENST00000537335 XKR9Q5GH70 373 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 SDE2Q6IQ49 451 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 PI16Q6UXB8 463 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.39□□□□□ -0.43
POLR1B-216ENST00000537335 CITED4Q96RK1 184 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 NACA2Q9H009 215 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 GJB4Q9NTQ9 266 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 CTNNAL1Q9UBT7 734 aa12.39□□□□□ -0.43
POLR1B-216ENST00000537335 POTECB2RU33 542 aa12.38□□□□□ -0.43
POLR1B-216ENST00000537335 PMLP29590 882 aa12.38□□□□□ -0.43
POLR1B-216ENST00000537335 IL13P35225 146 aa12.38□□□□□ -0.43
POLR1B-216ENST00000537335 RNF220Q5VTB9 566 aa12.38□□□□□ -0.43
POLR1B-216ENST00000537335 MTHFD1LQ6UB35 978 aa12.38□□□□□ -0.43
POLR1B-216ENST00000537335 PHACTR1Q9C0D0 580 aa12.38□□□□□ -0.43
POLR1B-216ENST00000537335 SYNJ2BP-COX16A0A087WUM0 186 aa12.38□□□□□ -0.43
POLR1B-216ENST00000537335 KANSL1LA0AUZ9 987 aa12.38□□□□□ -0.43
POLR1B-216ENST00000537335 DPPA5A6NC42 116 aa12.38□□□□□ -0.43
POLR1B-216ENST00000537335 NCKAP1LP55160 1127 aa12.38□□□□□ -0.43
POLR1B-216ENST00000537335 CSTF3Q12996 717 aaKnown RBP12.38□□□□□ -0.43
POLR1B-216ENST00000537335 USH1GQ495M9 461 aa12.38□□□□□ -0.43
POLR1B-216ENST00000537335 TRIM65Q6PJ69 517 aa12.38□□□□□ -0.43
POLR1B-216ENST00000537335 AKAP14Q86UN6 197 aa12.38□□□□□ -0.43
POLR1B-216ENST00000537335 SCAIQ8N9R8 606 aa12.38□□□□□ -0.43
POLR1B-216ENST00000537335 JMJD4Q9H9V9 463 aa12.38□□□□□ -0.43
POLR1B-216ENST00000537335 TRNAU1APQ9NX07 287 aaKnown RBP12.38□□□□□ -0.43
POLR1B-216ENST00000537335 COX16Q9P0S2 106 aa12.38□□□□□ -0.43
POLR1B-216ENST00000537335 SFMBT1Q9UHJ3 866 aa12.38□□□□□ -0.43
POLR1B-216ENST00000537335 GRID1Q9ULK0 1009 aa12.38□□□□□ -0.43
POLR1B-216ENST00000537335 RPL26L1Q9UNX3 145 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms