RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 CNKSR3Q6P9H4 555 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 CROCCP2Q86T23 111 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 SERINC5Q86VE9 423 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 SNX29Q8TEQ0 813 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 LRRC15Q8TF66 581 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 PNMA5Q96PV4 448 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 KRT12Q99456 494 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 GPR20Q99678 358 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 LSM14BQ9BX40 385 aaKnown RBP12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 SLITRK6Q9H5Y7 841 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 INTUQ9ULD6 942 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 PTPRSQ13332 1948 aa12.47□□□□□ -0.41
CHRNB1-202ENST00000536404 PRRC2BQ5JSZ5 2229 aaKnown RBP12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 LCHNA4D1U4 455 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 ZNF233A6NK53 670 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 LIN7AO14910 233 aaPredicted RBP12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 EPHB6O15197 1021 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 TREHO43280 583 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 TLL1O43897 1013 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 GFPT2O94808 682 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 PARNO95453 639 aaKnown RBP12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 THPOP40225 353 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 SP4Q02446 784 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 SKIDA1Q1XH10 827 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 CCDC38Q502W7 563 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 ZCWPW2Q504Y3 356 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 TJAP1Q5JTD0 557 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 FAM26FQ5R3K3 315 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 METTL7BQ6UX53 244 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 CCDC121Q6ZUS5 278 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 TRIM50Q86XT4 487 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 ARNTL2Q8WYA1 636 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 DDX12PQ92771 950 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 ATP6V0A1Q93050 837 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 CCT8L2Q96SF2 557 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 RNPEPQ9H4A4 650 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 PSTPIP2Q9H939 334 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 CNOT10Q9H9A5 744 aaKnown RBP12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 TMEM59LQ9UK28 342 aa12.46□□□□□ -0.41
CHRNB1-202ENST00000536404 A0A0A6YYK5 440 aaPredicted RBP12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 PGRMC1O00264 195 aaKnown RBP12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 CETN3O15182 167 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 MARCH6O60337 910 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 ATP9AO75110 1047 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 KRT14P02533 472 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 HOXC8P31273 242 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 GBP2P32456 591 aaPredicted RBP12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 USP11P51784 963 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 EIF3BP55884 814 aaKnown RBP12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 ACTN3Q08043 901 aaPredicted RBP12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 KCNMA1Q12791 1236 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 ITGB3BPQ13352 177 aaPredicted RBP12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 RAPGEF1Q13905 1077 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 HLTFQ14527 1009 aaKnown RBP eCLIP12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 HYIQ5T013 277 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 XRRA1Q6P2D8 792 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 NLRX1Q86UT6 975 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 TRIM59Q8IWR1 403 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 MYCBPAPQ8TBZ2 947 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 CASKIN2Q8WXE0 1202 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 PSMB7Q99436 277 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 OSBPL7Q9BZF2 842 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 FAM114A2Q9NRY5 505 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 SETD4Q9NVD3 440 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 PANK4Q9NVE7 773 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 THEGQ9P2T0 379 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 PLAAQ9Y263 795 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 DAAM1Q9Y4D1 1078 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 SAMM50Q9Y512 469 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 MTCH2Q9Y6C9 303 aa12.45□□□□□ -0.42
CHRNB1-202ENST00000536404 ABHD14A-ACY1A0A1B0GW23 586 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 GMNCA6NCL1 334 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 RSPH10B2B2RC85 870 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 AHCYL1O43865 530 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 CAND2O75155 1236 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 LGR5O75473 907 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 RSPH10BP0C881 870 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 ITGB5P18084 799 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 ATP1A2P50993 1020 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 NPEPPSP55786 919 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 POLR2FP61218 127 aaKnown RBP12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 COASYQ13057 564 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 IKBKEQ14164 716 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 NAA25Q14CX7 972 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 RNF187Q5TA31 235 aaPredicted RBP12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 CDCA2Q69YH5 1023 aaPredicted RBP12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 FAM117BQ6P1L5 589 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 TLDC1Q6P9B6 456 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 DYMQ7RTS9 669 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 MFN1Q8IWA4 741 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 ZC3H3Q8IXZ2 948 aaKnown RBP12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 NAP1L3Q99457 506 aaPredicted RBP12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 ZBED2Q9BTP6 218 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 SALL4Q9UJQ4 1053 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 FBXL5Q9UKA1 691 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 RPS6KL1Q9Y6S9 549 aa12.44□□□□□ -0.42
CHRNB1-202ENST00000536404 RASSF9O75901 435 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms