RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 UBQLN1Q9UMX0 589 aaKnown RBP12.44□□□□□ -0.42
CDCA3-206ENST00000536241 SIK3Q9Y2K2 1263 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 DERAQ9Y315 318 aa12.44□□□□□ -0.42
CDCA3-206ENST00000536241 HLA-DRAP01903 254 aa12.43□□□□□ -0.42
CDCA3-206ENST00000536241 ITGB3P05106 788 aa12.43□□□□□ -0.42
CDCA3-206ENST00000536241 KRT19P08727 400 aa12.43□□□□□ -0.42
CDCA3-206ENST00000536241 GATMP50440 423 aa12.43□□□□□ -0.42
CDCA3-206ENST00000536241 SOX4Q06945 474 aaPredicted RBP12.43□□□□□ -0.42
CDCA3-206ENST00000536241 LRMPQ12912 555 aa12.43□□□□□ -0.42
CDCA3-206ENST00000536241 TRPC3Q13507 836 aa12.43□□□□□ -0.42
CDCA3-206ENST00000536241 GLB1LQ6UWU2 654 aa12.43□□□□□ -0.42
CDCA3-206ENST00000536241 TMC6Q7Z403 805 aa12.43□□□□□ -0.42
CDCA3-206ENST00000536241 TMCO2Q7Z6W1 182 aaPredicted RBP12.43□□□□□ -0.42
CDCA3-206ENST00000536241 NPAS4Q8IUM7 802 aa12.43□□□□□ -0.42
CDCA3-206ENST00000536241 C1orf127Q8N9H9 656 aa12.43□□□□□ -0.42
CDCA3-206ENST00000536241 SPC24Q8NBT2 197 aa12.43□□□□□ -0.42
CDCA3-206ENST00000536241 BEST2Q8NFU1 509 aa12.43□□□□□ -0.42
CDCA3-206ENST00000536241 TOP1MTQ969P6 601 aa12.43□□□□□ -0.42
CDCA3-206ENST00000536241 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.43□□□□□ -0.423e-7■■■□□ 14.6
CDCA3-206ENST00000536241 PI4K2AQ9BTU6 479 aa12.43□□□□□ -0.42
CDCA3-206ENST00000536241 GOLGA2P5Q9HBQ8 144 aa12.43□□□□□ -0.42
CDCA3-206ENST00000536241 GCNT4Q9P109 453 aa12.43□□□□□ -0.42
CDCA3-206ENST00000536241 TUBGCP4Q9UGJ1 667 aa12.43□□□□□ -0.42
CDCA3-206ENST00000536241 SIX4Q9UIU6 781 aa12.43□□□□□ -0.42
CDCA3-206ENST00000536241 NR2E3Q9Y5X4 410 aa12.43□□□□□ -0.42
CDCA3-206ENST00000536241 ZBBXA8MT70 800 aa12.42□□□□□ -0.42
CDCA3-206ENST00000536241 EFCAB14O75071 495 aa12.42□□□□□ -0.42
CDCA3-206ENST00000536241 AMHP03971 560 aa12.42□□□□□ -0.42
CDCA3-206ENST00000536241 PIK3CAP42336 1068 aa12.42□□□□□ -0.42
CDCA3-206ENST00000536241 MYL6P60660 151 aa12.42□□□□□ -0.42
CDCA3-206ENST00000536241 WDR5P61964 334 aaKnown RBP12.42□□□□□ -0.42
CDCA3-206ENST00000536241 DEFB103AP81534 67 aa12.42□□□□□ -0.42
CDCA3-206ENST00000536241 NCOA4Q13772 614 aa12.42□□□□□ -0.42
CDCA3-206ENST00000536241 NAB2Q15742 525 aa12.42□□□□□ -0.42
CDCA3-206ENST00000536241 NOMO2Q5JPE7 1267 aa12.42□□□□□ -0.42
CDCA3-206ENST00000536241 SPECC1LQ69YQ0 1117 aa12.42□□□□□ -0.42
CDCA3-206ENST00000536241 DPY19L2P1Q6NXN4 242 aa12.42□□□□□ -0.42
CDCA3-206ENST00000536241 TRIM65Q6PJ69 517 aa12.42□□□□□ -0.42
CDCA3-206ENST00000536241 CXorf38Q8TB03 319 aa12.42□□□□□ -0.42
CDCA3-206ENST00000536241 CPLX3Q8WVH0 158 aa12.42□□□□□ -0.42
CDCA3-206ENST00000536241 TATDN2Q93075 761 aa12.42□□□□□ -0.42
CDCA3-206ENST00000536241 CASD1Q96PB1 797 aa12.42□□□□□ -0.42
CDCA3-206ENST00000536241 LSM14BQ9BX40 385 aaKnown RBP12.42□□□□□ -0.42
CDCA3-206ENST00000536241 INTS2Q9H0H0 1204 aaKnown RBP12.42□□□□□ -0.42
CDCA3-206ENST00000536241 FAM207AQ9NSI2 230 aaPredicted RBP12.42□□□□□ -0.42
CDCA3-206ENST00000536241 RNF216Q9NWF9 866 aaPredicted RBP12.42□□□□□ -0.42
CDCA3-206ENST00000536241 AGAP1Q9UPQ3 857 aa12.42□□□□□ -0.42
CDCA3-206ENST00000536241 MICAL3Q7RTP6 2002 aa12.42□□□□□ -0.42
CDCA3-206ENST00000536241 EPHB6O15197 1021 aa12.41□□□□□ -0.42
CDCA3-206ENST00000536241 INPPL1O15357 1258 aa12.41□□□□□ -0.42
CDCA3-206ENST00000536241 XPOTO43592 962 aaKnown RBP12.41□□□□□ -0.42
CDCA3-206ENST00000536241 BAIAP3O94812 1187 aa12.41□□□□□ -0.42
CDCA3-206ENST00000536241 NOL4O94818 638 aa12.41□□□□□ -0.42
CDCA3-206ENST00000536241 DDHD2O94830 711 aa12.41□□□□□ -0.42
CDCA3-206ENST00000536241 CYP3A5P20815 502 aa12.41□□□□□ -0.42
CDCA3-206ENST00000536241 CDC25BP30305 580 aa12.41□□□□□ -0.42
CDCA3-206ENST00000536241 POLR2BP30876 1174 aaKnown RBP12.41□□□□□ -0.42
CDCA3-206ENST00000536241 RBP5P82980 135 aa12.41□□□□□ -0.42
CDCA3-206ENST00000536241 SGSM1Q2NKQ1 1148 aa12.41□□□□□ -0.42
CDCA3-206ENST00000536241 PHLDB3Q6NSJ2 640 aa12.41□□□□□ -0.42
CDCA3-206ENST00000536241 FAM117BQ6P1L5 589 aa12.41□□□□□ -0.42
CDCA3-206ENST00000536241 GJB7Q6PEY0 223 aa12.41□□□□□ -0.42
CDCA3-206ENST00000536241 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.41□□□□□ -0.42
CDCA3-206ENST00000536241 ZNF280BQ86YH2 543 aa12.41□□□□□ -0.42
CDCA3-206ENST00000536241 ABI1Q8IZP0 508 aa12.41□□□□□ -0.42
CDCA3-206ENST00000536241 NEK11Q8NG66 645 aa12.41□□□□□ -0.42
CDCA3-206ENST00000536241 RABGGTAQ92696 567 aa12.41□□□□□ -0.42
CDCA3-206ENST00000536241 SIX2Q9NPC8 291 aa12.41□□□□□ -0.42
CDCA3-206ENST00000536241 SLC38A7Q9NVC3 462 aa12.41□□□□□ -0.42
CDCA3-206ENST00000536241 CXXC1Q9P0U4 656 aaPredicted RBP12.41□□□□□ -0.42
CDCA3-206ENST00000536241 KANSL3Q9P2N6 904 aa12.41□□□□□ -0.42
CDCA3-206ENST00000536241 CACNG4Q9UBN1 327 aa12.41□□□□□ -0.42
CDCA3-206ENST00000536241 ANO9A1A5B4 782 aa12.4□□□□□ -0.42
CDCA3-206ENST00000536241 TBKBP1A7MCY6 615 aa12.4□□□□□ -0.42
CDCA3-206ENST00000536241 RNF225M0QZC1 329 aaPredicted RBP12.4□□□□□ -0.42
CDCA3-206ENST00000536241 PIRO00625 290 aa12.4□□□□□ -0.42
CDCA3-206ENST00000536241 PPEF2O14830 753 aa12.4□□□□□ -0.42
CDCA3-206ENST00000536241 HOXA2O43364 376 aa12.4□□□□□ -0.42
CDCA3-206ENST00000536241 DGKIO75912 1065 aa12.4□□□□□ -0.42
CDCA3-206ENST00000536241 TRIM21P19474 475 aaKnown RBP12.4□□□□□ -0.42
CDCA3-206ENST00000536241 IGFBP6P24592 240 aaPredicted RBP12.4□□□□□ -0.42
CDCA3-206ENST00000536241 KCNJ6P48051 423 aa12.4□□□□□ -0.42
CDCA3-206ENST00000536241 GRIK3Q13003 919 aa12.4□□□□□ -0.42
CDCA3-206ENST00000536241 WDR44Q5JSH3 913 aa12.4□□□□□ -0.42
CDCA3-206ENST00000536241 KLHDC7AQ5VTJ3 777 aa12.4□□□□□ -0.42
CDCA3-206ENST00000536241 C9orf57Q5W0N0 161 aa12.4□□□□□ -0.42
CDCA3-206ENST00000536241 SPOPLQ6IQ16 392 aa12.4□□□□□ -0.42
CDCA3-206ENST00000536241 PSRC1Q6PGN9 363 aaPredicted RBP12.4□□□□□ -0.42
CDCA3-206ENST00000536241 RRAGAQ7L523 313 aa12.4□□□□□ -0.42
CDCA3-206ENST00000536241 URGCPQ8TCY9 931 aa12.4□□□□□ -0.42
CDCA3-206ENST00000536241 NUP58Q9BVL2 599 aa12.4□□□□□ -0.42
CDCA3-206ENST00000536241 UBE2TQ9NPD8 197 aaPredicted RBP12.4□□□□□ -0.42
CDCA3-206ENST00000536241 PLCB1Q9NQ66 1216 aa12.4□□□□□ -0.42
CDCA3-206ENST00000536241 TBC1D13Q9NVG8 400 aa12.4□□□□□ -0.42
CDCA3-206ENST00000536241 ITGA11Q9UKX5 1188 aa12.4□□□□□ -0.42
CDCA3-206ENST00000536241 R3HCC1Q9Y3T6 440 aaKnown RBP12.4□□□□□ -0.42
CDCA3-206ENST00000536241 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.4□□□□□ -0.42
CDCA3-206ENST00000536241 ITIH6Q6UXX5 1313 aa12.4□□□□□ -0.42
CDCA3-206ENST00000536241 CASTOR2A6NHX0 329 aa12.4□□□□□ -0.43
CDCA3-206ENST00000536241 LRPAP1P30533 357 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms