RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 ST3GAL5Q9UNP4 418 aa11.7□□□□□ -0.54
UBE3B-205ENST00000535900 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.7□□□□□ -0.54
UBE3B-205ENST00000535900 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.7□□□□□ -0.54
UBE3B-205ENST00000535900 BDP1A6H8Y1 2624 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 GTPBP10A4D1E9 387 aaKnown RBP11.69□□□□□ -0.54
UBE3B-205ENST00000535900 LGALS16A8MUM7 142 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 PRR33A8MZF0 331 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 PMM2O15305 246 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 P4HA2O15460 535 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 LINC01565O15544 149 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 MBTPS2O43462 519 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 DCXO43602 365 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 CLTAP09496 248 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 SKIP12755 728 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 HOXA11P31270 313 aaPredicted RBP11.69□□□□□ -0.54
UBE3B-205ENST00000535900 GTF2F1P35269 517 aaKnown RBP eCLIP11.69□□□□□ -0.54
UBE3B-205ENST00000535900 IRS1P35568 1242 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 LTBRP36941 435 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 COPB1P53618 953 aaKnown RBP11.69□□□□□ -0.54
UBE3B-205ENST00000535900 AP3M2P53677 418 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 PLCB2Q00722 1185 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 DLX2Q07687 328 aaPredicted RBP11.69□□□□□ -0.54
UBE3B-205ENST00000535900 SMAD2Q15796 467 aaKnown RBP11.69□□□□□ -0.54
UBE3B-205ENST00000535900 CTC1Q2NKJ3 1217 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 FKBP15Q5T1M5 1219 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 SLC24A5Q71RS6 500 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 APTXQ7Z2E3 356 aaKnown RBP11.69□□□□□ -0.54
UBE3B-205ENST00000535900 ADGRD2Q7Z7M1 963 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 FAM228AQ86W67 206 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 CD302Q8IX05 232 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 THNSL1Q8IYQ7 743 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 HACE1Q8IYU2 909 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 CRIPAKQ8N1N5 446 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 TRIM44Q96DX7 344 aaPredicted RBP11.69□□□□□ -0.54
UBE3B-205ENST00000535900 PDZD7Q9H5P4 517 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 CDHR5Q9HBB8 845 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 RTN4Q9NQC3 1192 aaKnown RBP11.69□□□□□ -0.54
UBE3B-205ENST00000535900 ANKFY1Q9P2R3 1169 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 ARIH1Q9Y4X5 557 aaPredicted RBP11.69□□□□□ -0.54
UBE3B-205ENST00000535900 PCDHB12Q9Y5F1 795 aa11.69□□□□□ -0.54
UBE3B-205ENST00000535900 A0A1W2PQC6 194 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 B4GALT5O43286 388 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 IL18RAPO95256 599 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 FGFR1P11362 822 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 ZSCAN20P17040 1043 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-205ENST00000535900 DNAJB1P25685 340 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 NRIP1P48552 1158 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 CASP4P49662 377 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 RAB27AP51159 221 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 VAMP7P51809 220 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 GSDMDP57764 484 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 CLDN10P78369 228 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 CYP24A1Q07973 514 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 CETN1Q12798 172 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 BFSP1Q12934 665 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 CAMK1Q14012 370 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 NR1I3Q14994 352 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 PSMD6Q15008 389 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 VWA3BQ502W6 1294 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 SMYD5Q6GMV2 418 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 NT5DC4Q86YG4 428 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 BRSK2Q8IWQ3 736 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 SPPL3Q8TCT6 385 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 ZNF668Q96K58 619 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-205ENST00000535900 FAM213AQ9BRX8 229 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 CDT1Q9H211 546 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 NDST4Q9H3R1 872 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 PCIF1Q9H4Z3 704 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 PLEKHA5Q9HAU0 1116 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 TLR9Q9NR96 1032 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 RGS18Q9NS28 235 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 TMEM161AQ9NX61 479 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 IFNKQ9P0W0 207 aa11.68□□□□□ -0.54
UBE3B-205ENST00000535900 TISP43B9A030 160 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 C9IYK1 514 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 HOXA2O43364 376 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 FAM189A1O60320 539 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 AFPP02771 609 aaKnown RBP11.67□□□□□ -0.54
UBE3B-205ENST00000535900 EDN1P05305 212 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 LAG3P18627 525 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 GRM5P41594 1212 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 UBE3AQ05086 875 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 HSP90AA4PQ58FG1 418 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 RBM23Q86U06 439 aaKnown RBP11.67□□□□□ -0.54
UBE3B-205ENST00000535900 CREBRFQ8IUR6 639 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 ABI1Q8IZP0 508 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 LRRC43Q8N309 656 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 EFHBQ8N7U6 833 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 COLGALT1Q8NBJ5 622 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 MICAL1Q8TDZ2 1067 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 PARD3BQ8TEW8 1205 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 RSPH1Q8WYR4 309 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 SLC35C1Q96A29 364 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 EEF2KMTQ96G04 330 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 ZBTB45Q96K62 511 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-205ENST00000535900 ERGIC2Q96RQ1 377 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 FNBP1Q96RU3 617 aa11.67□□□□□ -0.54
UBE3B-205ENST00000535900 CCDC94Q9BW85 323 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-205ENST00000535900 TRIM6Q9C030 488 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-205ENST00000535900 XPO4Q9C0E2 1151 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms