RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 TMEM120BA0PK00 339 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 PSMD10O75832 226 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 GJA8P48165 433 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 RASSF2P50749 326 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 YARSP54577 528 aaKnown RBP20.38■□□□□ 0.85
SMPD1-210ENST00000534405 PHEXP78562 749 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 KHDC1Q4VXA5 237 aaKnown RBP20.38■□□□□ 0.85
SMPD1-210ENST00000534405 LRRC74BQ6ZQY2 392 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 ARMCX6Q7L4S7 300 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 FIZ1Q96SL8 496 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 ERP44Q9BS26 406 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 KIAA1683Q9H0B3 1180 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 IL1RAPL1Q9NZN1 696 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 STK24Q9Y6E0 443 aa20.38■□□□□ 0.85
SMPD1-210ENST00000534405 DDX3XO00571 662 aaKnown RBP eCLIP20.37■□□□□ 0.851e-11■■■■■ 63
SMPD1-210ENST00000534405 CCNFP41002 786 aa20.37■□□□□ 0.85
SMPD1-210ENST00000534405 SESN3P58005 492 aa20.37■□□□□ 0.85
SMPD1-210ENST00000534405 RTP1P59025 263 aa20.37■□□□□ 0.85
SMPD1-210ENST00000534405 AP1B1Q10567 949 aa20.37■□□□□ 0.85
SMPD1-210ENST00000534405 C10orf76Q5T2E6 689 aa20.37■□□□□ 0.85
SMPD1-210ENST00000534405 VSTM1Q6UX27 236 aa20.37■□□□□ 0.85
SMPD1-210ENST00000534405 TSHZ1Q6ZSZ6 1077 aa20.37■□□□□ 0.85
SMPD1-210ENST00000534405 SEPT14Q6ZU15 432 aa20.37■□□□□ 0.85
SMPD1-210ENST00000534405 MYCT1Q8N699 235 aa20.37■□□□□ 0.85
SMPD1-210ENST00000534405 C17orf50Q8WW18 174 aa20.37■□□□□ 0.85
SMPD1-210ENST00000534405 ERP27Q96DN0 273 aa20.37■□□□□ 0.85
SMPD1-210ENST00000534405 OLFM3Q96PB7 478 aa20.37■□□□□ 0.85
SMPD1-210ENST00000534405 SUN2Q9UH99 717 aa20.37■□□□□ 0.85
SMPD1-210ENST00000534405 DBR1Q9UK59 544 aaKnown RBP20.37■□□□□ 0.85
SMPD1-210ENST00000534405 FAM13AO94988 1023 aa20.37■□□□□ 0.85
SMPD1-210ENST00000534405 HSPA1LP34931 641 aa20.37■□□□□ 0.85
SMPD1-210ENST00000534405 CDK7P50613 346 aa20.37■□□□□ 0.85
SMPD1-210ENST00000534405 STAT2P52630 851 aa20.37■□□□□ 0.85
SMPD1-210ENST00000534405 ZDHHC24Q6UX98 284 aa20.37■□□□□ 0.85
SMPD1-210ENST00000534405 ZNF653Q96CK0 615 aa20.37■□□□□ 0.85
SMPD1-210ENST00000534405 TGS1Q96RS0 853 aaKnown RBP20.37■□□□□ 0.85
SMPD1-210ENST00000534405 PAIP2BQ9ULR5 123 aaKnown RBP20.37■□□□□ 0.85
SMPD1-210ENST00000534405 ENTPD3O75355 529 aa20.36■□□□□ 0.85
SMPD1-210ENST00000534405 T-ENOLP0DO92 83 aa20.36■□□□□ 0.85
SMPD1-210ENST00000534405 MARK3P27448 753 aa20.36■□□□□ 0.85
SMPD1-210ENST00000534405 SLCO1A2P46721 670 aa20.36■□□□□ 0.85
SMPD1-210ENST00000534405 DRG2P55039 364 aaKnown RBP20.36■□□□□ 0.85
SMPD1-210ENST00000534405 SLC34A1Q06495 639 aa20.36■□□□□ 0.85
SMPD1-210ENST00000534405 MAP7Q14244 749 aa20.36■□□□□ 0.85
SMPD1-210ENST00000534405 CCDC174Q6PII3 467 aa20.36■□□□□ 0.85
SMPD1-210ENST00000534405 C4orf50Q6ZRC1 276 aa20.36■□□□□ 0.85
SMPD1-210ENST00000534405 TPCN2Q8NHX9 752 aa20.36■□□□□ 0.85
SMPD1-210ENST00000534405 ROPN1BQ9BZX4 212 aaPredicted RBP20.36■□□□□ 0.85
SMPD1-210ENST00000534405 ROPN1Q9HAT0 212 aaPredicted RBP20.36■□□□□ 0.85
SMPD1-210ENST00000534405 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.36■□□□□ 0.85
SMPD1-210ENST00000534405 TTC7AQ9ULT0 858 aaPredicted RBP20.36■□□□□ 0.85
SMPD1-210ENST00000534405 GFPT2O94808 682 aa20.36■□□□□ 0.85
SMPD1-210ENST00000534405 CHRNA5P30532 468 aa20.36■□□□□ 0.85
SMPD1-210ENST00000534405 BTG3Q14201 252 aaPredicted RBP20.36■□□□□ 0.85
SMPD1-210ENST00000534405 LRRC43Q8N309 656 aa20.36■□□□□ 0.85
SMPD1-210ENST00000534405 IRGQQ8WZA9 623 aa20.36■□□□□ 0.85
SMPD1-210ENST00000534405 SEMA4AQ9H3S1 761 aa20.36■□□□□ 0.85
SMPD1-210ENST00000534405 RBBP6Q7Z6E9 1792 aaKnown RBP20.36■□□□□ 0.85
SMPD1-210ENST00000534405 GAP43P17677 238 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 PTENP60484 403 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 RCN1Q15293 331 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 SLC15A2Q16348 729 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 DAAM2Q86T65 1068 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 FAM186BQ8IYM0 893 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 PPFIBP2Q8ND30 876 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 MAGEB18Q96M61 343 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 TUFT1Q9NNX1 390 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 CHMP2BQ9UQN3 213 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 CHKBQ9Y259 395 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 STXBP5LQ9Y2K9 1186 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 A0A0J9YVX5 310 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 FAM187AA6NFU0 413 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 YDJCA8MPS7 323 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 EIF3DO15371 548 aaKnown RBP eCLIP20.35■□□□□ 0.85
SMPD1-210ENST00000534405 UBTFL6P0CB48 400 aaPredicted RBP20.35■□□□□ 0.85
SMPD1-210ENST00000534405 YY1P25490 414 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 PLOD1Q02809 727 aaPredicted RBP20.35■□□□□ 0.85
SMPD1-210ENST00000534405 PPP2R5CQ13362 524 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 SPDYAQ5MJ70 313 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 LNX1Q8TBB1 728 aaPredicted RBP20.35■□□□□ 0.85
SMPD1-210ENST00000534405 SLC5A5Q92911 643 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 ZNF184Q99676 751 aaPredicted RBP20.35■□□□□ 0.85
SMPD1-210ENST00000534405 ASCC2Q9H1I8 757 aaPredicted RBP20.35■□□□□ 0.85
SMPD1-210ENST00000534405 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.35■□□□□ 0.85
SMPD1-210ENST00000534405 SUCLA2Q9P2R7 463 aaPredicted RBP20.35■□□□□ 0.85
SMPD1-210ENST00000534405 BARX2Q9UMQ3 279 aaPredicted RBP20.35■□□□□ 0.85
SMPD1-210ENST00000534405 SH3GLB1Q9Y371 365 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 DAAM1Q9Y4D1 1078 aa20.35■□□□□ 0.85
SMPD1-210ENST00000534405 PASKQ96RG2 1323 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 GTPBP10A4D1E9 387 aaKnown RBP20.34■□□□□ 0.85
SMPD1-210ENST00000534405 TCP10L2B9ZVM9 353 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 ETS2P15036 469 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 PLTPP55058 493 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 HPCAP84074 193 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 DR1Q01658 176 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 PPP2R5EQ16537 467 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 WDR72Q3MJ13 1102 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 UBAP2Q5T6F2 1119 aaKnown RBP20.34■□□□□ 0.85
SMPD1-210ENST00000534405 ZNF554Q86TJ5 538 aa20.34■□□□□ 0.85
SMPD1-210ENST00000534405 U2AF1L4Q8WU68 220 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms