RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 ASB7Q9H672 318 aa23.24■■□□□ 1.31
PKP3-211ENST00000534401 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.24■■□□□ 1.31
PKP3-211ENST00000534401 DERAQ9Y315 318 aa23.24■■□□□ 1.31
PKP3-211ENST00000534401 PODXLO00592 558 aa23.23■■□□□ 1.31
PKP3-211ENST00000534401 TEX28O15482 410 aa23.23■■□□□ 1.31
PKP3-211ENST00000534401 B3GAT3O94766 335 aa23.23■■□□□ 1.31
PKP3-211ENST00000534401 IL9P15248 144 aa23.23■■□□□ 1.31
PKP3-211ENST00000534401 PPP2R3AQ06190 1150 aa23.23■■□□□ 1.31
PKP3-211ENST00000534401 RTP2Q5QGT7 225 aa23.23■■□□□ 1.31
PKP3-211ENST00000534401 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.23■■□□□ 1.31
PKP3-211ENST00000534401 POMGNT1Q8WZA1 660 aa23.23■■□□□ 1.31
PKP3-211ENST00000534401 TTPALQ9BTX7 342 aa23.23■■□□□ 1.31
PKP3-211ENST00000534401 UBQLN1Q9UMX0 589 aaKnown RBP23.23■■□□□ 1.31
PKP3-211ENST00000534401 FAM50BQ9Y247 325 aa23.23■■□□□ 1.31
PKP3-211ENST00000534401 UBE4BO95155 1302 aa23.23■■□□□ 1.31
PKP3-211ENST00000534401 PLXNA3P51805 1871 aa23.23■■□□□ 1.31
PKP3-211ENST00000534401 SRGAP2BP0DMP2 458 aa23.22■■□□□ 1.31
PKP3-211ENST00000534401 ACOT2P49753 483 aa23.22■■□□□ 1.31
PKP3-211ENST00000534401 FAM171A1Q5VUB5 890 aa23.22■■□□□ 1.31
PKP3-211ENST00000534401 SPATA1Q5VX52 437 aa23.22■■□□□ 1.31
PKP3-211ENST00000534401 LILRA6Q6PI73 481 aa23.22■■□□□ 1.31
PKP3-211ENST00000534401 LNX1Q8TBB1 728 aaPredicted RBP23.22■■□□□ 1.31
PKP3-211ENST00000534401 HASPINQ8TF76 798 aa23.22■■□□□ 1.31
PKP3-211ENST00000534401 SCFD1Q8WVM8 642 aa23.22■■□□□ 1.31
PKP3-211ENST00000534401 B3GALT6Q96L58 329 aa23.22■■□□□ 1.31
PKP3-211ENST00000534401 DZANK1Q9NVP4 752 aa23.22■■□□□ 1.31
PKP3-211ENST00000534401 PRKAG3Q9UGI9 489 aa23.22■■□□□ 1.31
PKP3-211ENST00000534401 KIAA0391O15091 583 aaKnown RBP23.21■■□□□ 1.31
PKP3-211ENST00000534401 TGFB1I1O43294 461 aa23.21■■□□□ 1.31
PKP3-211ENST00000534401 ZNF202O95125 648 aa23.21■■□□□ 1.31
PKP3-211ENST00000534401 LDHAP00338 332 aaKnown RBP23.21■■□□□ 1.31
PKP3-211ENST00000534401 EPCAMP16422 314 aa23.21■■□□□ 1.31
PKP3-211ENST00000534401 AARSP49588 968 aaKnown RBP eCLIP23.21■■□□□ 1.31
PKP3-211ENST00000534401 SNRPFP62306 86 aaKnown RBP23.21■■□□□ 1.31
PKP3-211ENST00000534401 CREMQ03060 361 aa23.21■■□□□ 1.31
PKP3-211ENST00000534401 KIAA1841Q6NSI8 718 aa23.21■■□□□ 1.31
PKP3-211ENST00000534401 KRBA2Q6ZNG9 492 aa23.21■■□□□ 1.31
PKP3-211ENST00000534401 ZSWIM2Q8NEG5 633 aa23.21■■□□□ 1.31
PKP3-211ENST00000534401 ENGASEQ8NFI3 743 aa23.21■■□□□ 1.31
PKP3-211ENST00000534401 RIN2Q8WYP3 895 aaPredicted RBP23.21■■□□□ 1.31
PKP3-211ENST00000534401 KIF12Q96FN5 646 aa23.21■■□□□ 1.31
PKP3-211ENST00000534401 UHRF1Q96T88 793 aaPredicted RBP23.21■■□□□ 1.31
PKP3-211ENST00000534401 CBWD1Q9BRT8 395 aa23.21■■□□□ 1.31
PKP3-211ENST00000534401 TUBGCP4Q9UGJ1 667 aa23.21■■□□□ 1.31
PKP3-211ENST00000534401 C2CD2Q9Y426 696 aa23.21■■□□□ 1.31
PKP3-211ENST00000534401 C5orf42Q9H799 3197 aa23.2■■□□□ 1.3
PKP3-211ENST00000534401 C19orf67A6NJJ6 358 aa23.2■■□□□ 1.3
PKP3-211ENST00000534401 C2CD2LO14523 706 aa23.2■■□□□ 1.3
PKP3-211ENST00000534401 TRAPPC3O43617 180 aa23.2■■□□□ 1.3
PKP3-211ENST00000534401 ADH1AP07327 375 aa23.2■■□□□ 1.3
PKP3-211ENST00000534401 KLRC2P26717 231 aa23.2■■□□□ 1.3
PKP3-211ENST00000534401 PSMD2Q13200 908 aa23.2■■□□□ 1.3
PKP3-211ENST00000534401 CLUL1Q15846 466 aa23.2■■□□□ 1.3
PKP3-211ENST00000534401 JADE1Q6IE81 842 aa23.2■■□□□ 1.3
PKP3-211ENST00000534401 LLGL2Q6P1M3 1020 aa23.2■■□□□ 1.3
PKP3-211ENST00000534401 PDXDC1Q6P996 788 aa23.2■■□□□ 1.3
PKP3-211ENST00000534401 SYCP3Q8IZU3 236 aa23.2■■□□□ 1.3
PKP3-211ENST00000534401 FMR1NBQ8N0W7 255 aaPredicted RBP23.2■■□□□ 1.3
PKP3-211ENST00000534401 HDAC7Q8WUI4 952 aa23.2■■□□□ 1.3
PKP3-211ENST00000534401 SUSD3Q96L08 255 aa23.2■■□□□ 1.3
PKP3-211ENST00000534401 FBXL18Q96ME1 805 aa23.2■■□□□ 1.3
PKP3-211ENST00000534401 CLSTN3Q9BQT9 956 aa23.2■■□□□ 1.3
PKP3-211ENST00000534401 MUC3AQ02505 3323 aa23.19■■□□□ 1.3
PKP3-211ENST00000534401 ANO9A1A5B4 782 aa23.19■■□□□ 1.3
PKP3-211ENST00000534401 XPOTO43592 962 aaKnown RBP23.19■■□□□ 1.3
PKP3-211ENST00000534401 EXTL3O43909 919 aa23.19■■□□□ 1.3
PKP3-211ENST00000534401 IL18RAPO95256 599 aa23.19■■□□□ 1.3
PKP3-211ENST00000534401 BRCC3P46736 316 aa23.19■■□□□ 1.3
PKP3-211ENST00000534401 SPAG1Q07617 926 aa23.19■■□□□ 1.3
PKP3-211ENST00000534401 DPYDQ12882 1025 aa23.19■■□□□ 1.3
PKP3-211ENST00000534401 SNW1Q13573 536 aaKnown RBP23.19■■□□□ 1.3
PKP3-211ENST00000534401 MRPL58Q14197 206 aaKnown RBP23.19■■□□□ 1.3
PKP3-211ENST00000534401 TPRNQ4KMQ1 711 aa23.19■■□□□ 1.3
PKP3-211ENST00000534401 NT5DC4Q86YG4 428 aa23.19■■□□□ 1.3
PKP3-211ENST00000534401 BRSK2Q8IWQ3 736 aa23.19■■□□□ 1.3
PKP3-211ENST00000534401 TMEM174Q8WUU8 243 aa23.19■■□□□ 1.3
PKP3-211ENST00000534401 NECAB3Q96P71 396 aaPredicted RBP23.19■■□□□ 1.3
PKP3-211ENST00000534401 RHOBTB2Q9BYZ6 727 aa23.19■■□□□ 1.3
PKP3-211ENST00000534401 USP15Q9Y4E8 981 aaPredicted RBP23.19■■□□□ 1.3
PKP3-211ENST00000534401 SCN1AP35498 2009 aa23.19■■□□□ 1.3
PKP3-211ENST00000534401 SYN3O14994 580 aa23.18■■□□□ 1.3
PKP3-211ENST00000534401 TBC1D4O60343 1298 aa23.18■■□□□ 1.3
PKP3-211ENST00000534401 ITIH3Q06033 890 aa23.18■■□□□ 1.3
PKP3-211ENST00000534401 STK4Q13043 487 aa23.18■■□□□ 1.3
PKP3-211ENST00000534401 KMT5BQ4FZB7 885 aa23.18■■□□□ 1.3
PKP3-211ENST00000534401 PRSS55Q6UWB4 352 aaPredicted RBP23.18■■□□□ 1.3
PKP3-211ENST00000534401 C12orf56Q8IXR9 622 aa23.18■■□□□ 1.3
PKP3-211ENST00000534401 TMEM130Q8N3G9 435 aa23.18■■□□□ 1.3
PKP3-211ENST00000534401 CMASQ8NFW8 434 aaPredicted RBP23.18■■□□□ 1.3
PKP3-211ENST00000534401 ADAM7Q9H2U9 754 aa23.18■■□□□ 1.3
PKP3-211ENST00000534401 SLC39A2Q9NP94 309 aa23.18■■□□□ 1.3
PKP3-211ENST00000534401 MTRRQ9UBK8 725 aa23.18■■□□□ 1.3
PKP3-211ENST00000534401 BACE2Q9Y5Z0 518 aa23.18■■□□□ 1.3
PKP3-211ENST00000534401 M0QZQ0 153 aa23.17■■□□□ 1.3
PKP3-211ENST00000534401 PIRO00625 290 aa23.17■■□□□ 1.3
PKP3-211ENST00000534401 NFICP08651 508 aa23.17■■□□□ 1.3
PKP3-211ENST00000534401 PAX3P23760 479 aa23.17■■□□□ 1.3
PKP3-211ENST00000534401 TKTP29401 623 aaKnown RBP23.17■■□□□ 1.3
PKP3-211ENST00000534401 CA8P35219 290 aa23.17■■□□□ 1.3
PKP3-211ENST00000534401 WNT7BP56706 349 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms