RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 GOLGA8NF8WBI6 632 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 ATMINO43313 823 aaPredicted RBP18.19■□□□□ 0.5
PHRF1-206ENST00000534320 AKAP3O75969 853 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 ATICP31939 592 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 MFSD14CQ5VZR4 134 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 KRT80Q6KB66 452 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 GPRC5AQ8NFJ5 357 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 CCDC138Q96M89 665 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 DHX35Q9H5Z1 703 aaKnown RBP18.19■□□□□ 0.5
PHRF1-206ENST00000534320 AGO4Q9HCK5 861 aaKnown RBP18.19■□□□□ 0.5
PHRF1-206ENST00000534320 PXMP2Q9NR77 195 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 OLFML3Q9NRN5 406 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 KLHL11Q9NVR0 708 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 NRXN3Q9Y4C0 1643 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 PLSCR1O15162 318 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 RAD51CO43502 376 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 IL18RAPO95256 599 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 VEGFAP15692 232 aaPredicted RBP18.19■□□□□ 0.5
PHRF1-206ENST00000534320 ZNF677Q86XU0 584 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 CBWD2Q8IUF1 395 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 ZBED8Q8IZ13 594 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 ARHGAP18Q8N392 663 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 PDCD2LQ9BRP1 358 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 LRRC4BQ9NT99 713 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 PRMT7Q9NVM4 692 aaPredicted RBP18.19■□□□□ 0.5
PHRF1-206ENST00000534320 SNX9Q9Y5X1 595 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 ARSEP51690 589 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 HERVK_113P62684 666 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 HP1BP3Q5SSJ5 553 aaPredicted RBP18.19■□□□□ 0.5
PHRF1-206ENST00000534320 PARK7Q99497 189 aaKnown RBP18.19■□□□□ 0.5
PHRF1-206ENST00000534320 CBWD1Q9BRT8 395 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 BLOC1S4Q9NUP1 217 aa18.19■□□□□ 0.5
PHRF1-206ENST00000534320 FOXN3O00409 490 aaPredicted RBP18.18■□□□□ 0.5
PHRF1-206ENST00000534320 TNPO2O14787 897 aaKnown RBP18.18■□□□□ 0.5
PHRF1-206ENST00000534320 NPTX2P47972 431 aa18.18■□□□□ 0.5
PHRF1-206ENST00000534320 SYDE1Q6ZW31 735 aaPredicted RBP18.18■□□□□ 0.5
PHRF1-206ENST00000534320 KIAA1683Q9H0B3 1180 aa18.18■□□□□ 0.5
PHRF1-206ENST00000534320 GPC4O75487 556 aa18.18■□□□□ 0.5
PHRF1-206ENST00000534320 TRPA1O75762 1119 aa18.18■□□□□ 0.5
PHRF1-206ENST00000534320 HEATR6Q6AI08 1181 aaKnown RBP18.18■□□□□ 0.5
PHRF1-206ENST00000534320 SCN4BQ8IWT1 228 aa18.18■□□□□ 0.5
PHRF1-206ENST00000534320 TPCN2Q8NHX9 752 aa18.18■□□□□ 0.5
PHRF1-206ENST00000534320 TNIP3Q96KP6 325 aa18.18■□□□□ 0.5
PHRF1-206ENST00000534320 GOLGA8CPA6NN73 597 aa18.18■□□□□ 0.5
PHRF1-206ENST00000534320 GMNCA6NCL1 334 aa18.18■□□□□ 0.5
PHRF1-206ENST00000534320 COPEO14579 308 aa18.18■□□□□ 0.5
PHRF1-206ENST00000534320 KRT38O76015 456 aa18.18■□□□□ 0.5
PHRF1-206ENST00000534320 FGFR4P22455 802 aa18.18■□□□□ 0.5
PHRF1-206ENST00000534320 MAP3K7CLP57077 242 aa18.18■□□□□ 0.5
PHRF1-206ENST00000534320 STILQ15468 1287 aa18.18■□□□□ 0.5
PHRF1-206ENST00000534320 EPC2Q52LR7 807 aa18.18■□□□□ 0.5
PHRF1-206ENST00000534320 C4orf19Q8IY42 314 aa18.18■□□□□ 0.5
PHRF1-206ENST00000534320 DTNBP1Q96EV8 351 aa18.18■□□□□ 0.5
PHRF1-206ENST00000534320 DUSP9Q99956 384 aaKnown RBP18.18■□□□□ 0.5
PHRF1-206ENST00000534320 LACRTQ9GZZ8 138 aa18.18■□□□□ 0.5
PHRF1-206ENST00000534320 VIL1P09327 827 aaKnown RBP18.17■□□□□ 0.5
PHRF1-206ENST00000534320 BRAFP15056 766 aa18.17■□□□□ 0.5
PHRF1-206ENST00000534320 CERS5Q8N5B7 392 aa18.17■□□□□ 0.5
PHRF1-206ENST00000534320 TRIML2Q8N7C3 387 aa18.17■□□□□ 0.5
PHRF1-206ENST00000534320 PRPF31Q8WWY3 499 aaKnown RBP18.17■□□□□ 0.5
PHRF1-206ENST00000534320 MCEEQ96PE7 176 aa18.17■□□□□ 0.5
PHRF1-206ENST00000534320 MTMR9Q96QG7 549 aa18.17■□□□□ 0.5
PHRF1-206ENST00000534320 NIF3L1Q9GZT8 377 aa18.17■□□□□ 0.5
PHRF1-206ENST00000534320 MTFR1LQ9H019 292 aa18.17■□□□□ 0.5
PHRF1-206ENST00000534320 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.17■□□□□ 0.5
PHRF1-206ENST00000534320 CAPN6Q9Y6Q1 641 aa18.17■□□□□ 0.5
PHRF1-206ENST00000534320 WNT10BO00744 389 aa18.17■□□□□ 0.5
PHRF1-206ENST00000534320 SUPT20HL2P0C7V6 817 aa18.17■□□□□ 0.5
PHRF1-206ENST00000534320 TM4SF1P30408 202 aa18.17■□□□□ 0.5
PHRF1-206ENST00000534320 KPNA2P52292 529 aaKnown RBP18.17■□□□□ 0.5
PHRF1-206ENST00000534320 CDKL3Q8IVW4 592 aaPredicted RBP18.17■□□□□ 0.5
PHRF1-206ENST00000534320 THAP2Q9H0W7 228 aa18.17■□□□□ 0.5
PHRF1-206ENST00000534320 ARHGAP20Q9P2F6 1191 aa18.17■□□□□ 0.5
PHRF1-206ENST00000534320 FAM198AQ9UFP1 575 aa18.17■□□□□ 0.5
PHRF1-206ENST00000534320 LOC102724159A0A0B4J2E5 919 aa18.17■□□□□ 0.5
PHRF1-206ENST00000534320 PWP2Q15269 919 aaKnown RBP18.17■□□□□ 0.5
PHRF1-206ENST00000534320 TAF1CQ15572 869 aaPredicted RBP18.17■□□□□ 0.5
PHRF1-206ENST00000534320 ATG16L1Q676U5 607 aa18.17■□□□□ 0.5
PHRF1-206ENST00000534320 MRIQ9BWK5 157 aa18.17■□□□□ 0.5
PHRF1-206ENST00000534320 MYCP01106 439 aaPredicted RBP18.17■□□□□ 0.5
PHRF1-206ENST00000534320 TBX2Q13207 712 aaPredicted RBP18.17■□□□□ 0.5
PHRF1-206ENST00000534320 C1orf228Q6PIY5 440 aa18.17■□□□□ 0.5
PHRF1-206ENST00000534320 HPCAL4Q9UM19 191 aa18.17■□□□□ 0.5
PHRF1-206ENST00000534320 CCL15-CCL14A0A0B4J2E2 113 aa18.16■□□□□ 0.5
PHRF1-206ENST00000534320 PIGHQ14442 188 aaPredicted RBP18.16■□□□□ 0.5
PHRF1-206ENST00000534320 CCL15Q16663 113 aa18.16■□□□□ 0.5
PHRF1-206ENST00000534320 EFHC2Q5JST6 749 aa18.16■□□□□ 0.5
PHRF1-206ENST00000534320 ZC3H18Q86VM9 953 aaKnown RBP18.16■□□□□ 0.5
PHRF1-206ENST00000534320 TTC17Q96AE7 1141 aa18.16■□□□□ 0.5
PHRF1-206ENST00000534320 GAS2O43903 313 aaKnown RBP18.16■□□□□ 0.5
PHRF1-206ENST00000534320 CETPP11597 493 aa18.16■□□□□ 0.5
PHRF1-206ENST00000534320 CAPRIN2Q6IMN6 1127 aaKnown RBP18.16■□□□□ 0.5
PHRF1-206ENST00000534320 ATP11CQ8NB49 1132 aa18.16■□□□□ 0.5
PHRF1-206ENST00000534320 HDAC11Q96DB2 347 aa18.16■□□□□ 0.5
PHRF1-206ENST00000534320 PIK3R2O00459 728 aa18.16■□□□□ 0.5
PHRF1-206ENST00000534320 WEE2P0C1S8 567 aa18.16■□□□□ 0.5
PHRF1-206ENST00000534320 LCP1P13796 627 aa18.16■□□□□ 0.5
PHRF1-206ENST00000534320 EVX2Q03828 476 aa18.16■□□□□ 0.5
PHRF1-206ENST00000534320 LAMC2Q13753 1193 aa18.16■□□□□ 0.5
PHRF1-206ENST00000534320 BEND6Q5SZJ8 279 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms