RNA–Protein interactions for RNA: ENST00000533685.1

SYVN1-215, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-215ENST00000533685 OTOP2Q7RTS6 562 aa13.36□□□□□ -0.27
SYVN1-215ENST00000533685 CMTR2Q8IYT2 770 aaKnown RBP13.36□□□□□ -0.27
SYVN1-215ENST00000533685 LRRC43Q8N309 656 aa13.36□□□□□ -0.27
SYVN1-215ENST00000533685 C1orf127Q8N9H9 656 aa13.36□□□□□ -0.27
SYVN1-215ENST00000533685 RNF169Q8NCN4 708 aa13.36□□□□□ -0.27
SYVN1-215ENST00000533685 OR5B17Q8NGF7 314 aa13.36□□□□□ -0.27
SYVN1-215ENST00000533685 FAM212AQ96EL1 285 aa13.36□□□□□ -0.27
SYVN1-215ENST00000533685 ZFP42Q96MM3 310 aa13.36□□□□□ -0.27
SYVN1-215ENST00000533685 NAP1L5Q96NT1 182 aaPredicted RBP13.36□□□□□ -0.27
SYVN1-215ENST00000533685 CASD1Q96PB1 797 aa13.36□□□□□ -0.27
SYVN1-215ENST00000533685 VPS16Q9H269 839 aa13.36□□□□□ -0.27
SYVN1-215ENST00000533685 PLCB1Q9NQ66 1216 aa13.36□□□□□ -0.27
SYVN1-215ENST00000533685 IFNKQ9P0W0 207 aa13.36□□□□□ -0.27
SYVN1-215ENST00000533685 FBXL5Q9UKA1 691 aa13.36□□□□□ -0.27
SYVN1-215ENST00000533685 ITIH6Q6UXX5 1313 aa13.36□□□□□ -0.27
SYVN1-215ENST00000533685 TMEM189-UBE2V1I3L0A0 370 aa13.35□□□□□ -0.27
SYVN1-215ENST00000533685 GJB5O95377 273 aa13.35□□□□□ -0.27
SYVN1-215ENST00000533685 FGFR1P11362 822 aa13.35□□□□□ -0.27
SYVN1-215ENST00000533685 CDC25BP30305 580 aa13.35□□□□□ -0.27
SYVN1-215ENST00000533685 BMP8BP34820 402 aa13.35□□□□□ -0.27
SYVN1-215ENST00000533685 SCNN1GP51170 649 aa13.35□□□□□ -0.27
SYVN1-215ENST00000533685 RBP5P82980 135 aa13.35□□□□□ -0.27
SYVN1-215ENST00000533685 HTRA4P83105 476 aaPredicted RBP13.35□□□□□ -0.27
SYVN1-215ENST00000533685 UBXN1Q04323 297 aa13.35□□□□□ -0.27
SYVN1-215ENST00000533685 NCOA4Q13772 614 aa13.35□□□□□ -0.27
SYVN1-215ENST00000533685 FIGNQ5HY92 759 aa13.35□□□□□ -0.27
SYVN1-215ENST00000533685 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.35□□□□□ -0.27
SYVN1-215ENST00000533685 HELQQ8TDG4 1101 aa13.35□□□□□ -0.27
SYVN1-215ENST00000533685 POP1Q99575 1024 aaKnown RBP13.35□□□□□ -0.27
SYVN1-215ENST00000533685 GDF15Q99988 308 aa13.35□□□□□ -0.27
SYVN1-215ENST00000533685 TMEM175Q9BSA9 504 aa13.35□□□□□ -0.27
SYVN1-215ENST00000533685 IMPG2Q9BZV3 1241 aa13.35□□□□□ -0.27
SYVN1-215ENST00000533685 TRIM5Q9C035 493 aa13.35□□□□□ -0.27
SYVN1-215ENST00000533685 XPO4Q9C0E2 1151 aaKnown RBP13.35□□□□□ -0.27
SYVN1-215ENST00000533685 RAB20Q9NX57 234 aa13.35□□□□□ -0.27
SYVN1-215ENST00000533685 DPP3Q9NY33 737 aa13.35□□□□□ -0.27
SYVN1-215ENST00000533685 KLK14Q9P0G3 267 aa13.35□□□□□ -0.27
SYVN1-215ENST00000533685 SLC4A7Q9Y6M7 1214 aa13.35□□□□□ -0.27
SYVN1-215ENST00000533685 ANK1P16157 1881 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 PIRO00625 290 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 PHACTR2O75167 634 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 VNN1O95497 513 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 ASS1P00966 412 aaKnown RBP13.34□□□□□ -0.27
SYVN1-215ENST00000533685 ZNF75DP51815 510 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 DEFB103AP81534 67 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 BIRC3Q13489 604 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 SGSM1Q2NKQ1 1148 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 GLRA4Q5JXX5 417 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 C9orf57Q5W0N0 161 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 CCDC150Q8NCX0 1101 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 LMO3Q8TAP4 145 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 TAS1R2Q8TE23 839 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 JAKMIP2Q96AA8 810 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 ZNF560Q96MR9 790 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 EDEM3Q9BZQ6 932 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 TBC1D13Q9NVG8 400 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 GCNT4Q9P109 453 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 SIX4Q9UIU6 781 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 PLAGL2Q9UPG8 496 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 SIK3Q9Y2K2 1263 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 R3HCC1Q9Y3T6 440 aaKnown RBP13.34□□□□□ -0.27
SYVN1-215ENST00000533685 INSL6Q9Y581 213 aa13.34□□□□□ -0.27
SYVN1-215ENST00000533685 ZBBXA8MT70 800 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 PES1O00541 588 aaKnown RBP13.33□□□□□ -0.28
SYVN1-215ENST00000533685 AP5Z1O43299 807 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 HLA-DRAP01903 254 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 FAM163BP0C2L3 166 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 ATP2A2P16615 1042 aaKnown RBP13.33□□□□□ -0.28
SYVN1-215ENST00000533685 PON1P27169 355 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 PIK3CAP42336 1068 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 AFF1P51825 1210 aaKnown RBP13.33□□□□□ -0.28
SYVN1-215ENST00000533685 MYO1EQ12965 1108 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 TRPC3Q13507 836 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 TRIM14Q14142 442 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 UPP1Q16831 310 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 SPECC1LQ69YQ0 1117 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 TRIM65Q6PJ69 517 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 ENOSF1Q7L5Y1 443 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 HERC6Q8IVU3 1022 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 COLGALT2Q8IYK4 626 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 EHBP1Q8NDI1 1231 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 SP7Q8TDD2 431 aaPredicted RBP13.33□□□□□ -0.28
SYVN1-215ENST00000533685 ANP32BQ92688 251 aaKnown RBP13.33□□□□□ -0.28
SYVN1-215ENST00000533685 NUP58Q9BVL2 599 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 XYLT2Q9H1B5 865 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 MIOSQ9NXC5 875 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 STK39Q9UEW8 545 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 TUBGCP4Q9UGJ1 667 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 INPP5FQ9Y2H2 1132 aa13.33□□□□□ -0.28
SYVN1-215ENST00000533685 PDCD11Q14690 1871 aaKnown RBP13.33□□□□□ -0.28
SYVN1-215ENST00000533685 ARHGEF37A1IGU5 675 aa13.32□□□□□ -0.28
SYVN1-215ENST00000533685 TBKBP1A7MCY6 615 aa13.32□□□□□ -0.28
SYVN1-215ENST00000533685 TEX33O43247 280 aa13.32□□□□□ -0.28
SYVN1-215ENST00000533685 ITGB3P05106 788 aa13.32□□□□□ -0.28
SYVN1-215ENST00000533685 P4HA1P13674 534 aa13.32□□□□□ -0.28
SYVN1-215ENST00000533685 TBXAS1P24557 533 aaPredicted RBP13.32□□□□□ -0.28
SYVN1-215ENST00000533685 POLR2BP30876 1174 aaKnown RBP13.32□□□□□ -0.28
SYVN1-215ENST00000533685 AARSP49588 968 aaKnown RBP eCLIP13.32□□□□□ -0.28
SYVN1-215ENST00000533685 GCNT1Q02742 428 aa13.32□□□□□ -0.28
SYVN1-215ENST00000533685 RNASELQ05823 741 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms