RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 ZDHHC7Q9NXF8 308 aa18.13■□□□□ 0.49
PKP3-209ENST00000533069 MUTYHQ9UIF7 546 aa18.13■□□□□ 0.49
PKP3-209ENST00000533069 USTQ9Y2C2 406 aa18.13■□□□□ 0.49
PKP3-209ENST00000533069 NUB1Q9Y5A7 615 aa18.13■□□□□ 0.49
PKP3-209ENST00000533069 STYXL1Q9Y6J8 313 aa18.13■□□□□ 0.49
PKP3-209ENST00000533069 ADRB2P07550 413 aa18.12■□□□□ 0.49
PKP3-209ENST00000533069 WEE2P0C1S8 567 aa18.12■□□□□ 0.49
PKP3-209ENST00000533069 RPL17P18621 184 aaKnown RBP18.12■□□□□ 0.49
PKP3-209ENST00000533069 CYP3A5P20815 502 aa18.12■□□□□ 0.49
PKP3-209ENST00000533069 TNFSF9P41273 254 aa18.12■□□□□ 0.49
PKP3-209ENST00000533069 AMPD3Q01432 767 aa18.12■□□□□ 0.49
PKP3-209ENST00000533069 POU5F1Q01860 360 aaKnown RBP18.12■□□□□ 0.49
PKP3-209ENST00000533069 ENOX2Q16206 610 aaKnown RBP18.12■□□□□ 0.49
PKP3-209ENST00000533069 KANK3Q6NY19 840 aa18.12■□□□□ 0.49
PKP3-209ENST00000533069 CCDC149Q6ZUS6 474 aa18.12■□□□□ 0.49
PKP3-209ENST00000533069 ANKS3Q6ZW76 656 aa18.12■□□□□ 0.49
PKP3-209ENST00000533069 GLYCTKQ8IVS8 523 aa18.12■□□□□ 0.49
PKP3-209ENST00000533069 CCDC65Q8IXS2 484 aa18.12■□□□□ 0.49
PKP3-209ENST00000533069 KREMEN2Q8NCW0 462 aa18.12■□□□□ 0.49
PKP3-209ENST00000533069 CLSTN3Q9BQT9 956 aa18.12■□□□□ 0.49
PKP3-209ENST00000533069 PANK4Q9NVE7 773 aa18.12■□□□□ 0.49
PKP3-209ENST00000533069 KBTBD4Q9NVX7 518 aa18.12■□□□□ 0.49
PKP3-209ENST00000533069 MTRRQ9UBK8 725 aa18.12■□□□□ 0.49
PKP3-209ENST00000533069 CPSF3Q9UKF6 684 aaKnown RBP18.12■□□□□ 0.49
PKP3-209ENST00000533069 UBQLN1Q9UMX0 589 aaKnown RBP18.12■□□□□ 0.49
PKP3-209ENST00000533069 PCDHB13Q9Y5F0 798 aa18.12■□□□□ 0.49
PKP3-209ENST00000533069 BACE2Q9Y5Z0 518 aa18.12■□□□□ 0.49
PKP3-209ENST00000533069 SYN3O14994 580 aa18.11■□□□□ 0.49
PKP3-209ENST00000533069 GCNT3O95395 438 aa18.11■□□□□ 0.49
PKP3-209ENST00000533069 TKTP29401 623 aaKnown RBP18.11■□□□□ 0.49
PKP3-209ENST00000533069 LRPAP1P30533 357 aa18.11■□□□□ 0.49
PKP3-209ENST00000533069 BRCC3P46736 316 aa18.11■□□□□ 0.49
PKP3-209ENST00000533069 DNM1Q05193 864 aaKnown RBP18.11■□□□□ 0.49
PKP3-209ENST00000533069 POSTNQ15063 836 aa18.11■□□□□ 0.49
PKP3-209ENST00000533069 L1TD1Q5T7N2 865 aaKnown RBP18.11■□□□□ 0.49
PKP3-209ENST00000533069 LIN9Q5TKA1 542 aa18.11■□□□□ 0.49
PKP3-209ENST00000533069 ADALQ6DHV7 355 aa18.11■□□□□ 0.49
PKP3-209ENST00000533069 TDRD5Q8NAT2 981 aaKnown RBP18.11■□□□□ 0.49
PKP3-209ENST00000533069 DHX58Q96C10 678 aa18.11■□□□□ 0.49
PKP3-209ENST00000533069 KIF12Q96FN5 646 aa18.11■□□□□ 0.49
PKP3-209ENST00000533069 ACCSQ96QU6 501 aa18.11■□□□□ 0.49
PKP3-209ENST00000533069 PYM1Q9BRP8 204 aaKnown RBP18.11■□□□□ 0.49
PKP3-209ENST00000533069 C11orf16Q9NQ32 467 aa18.11■□□□□ 0.49
PKP3-209ENST00000533069 FAM13BQ9NYF5 915 aa18.11■□□□□ 0.49
PKP3-209ENST00000533069 TUBGCP4Q9UGJ1 667 aa18.11■□□□□ 0.49
PKP3-209ENST00000533069 FBXW11Q9UKB1 542 aa18.11■□□□□ 0.49
PKP3-209ENST00000533069 PCDHA7Q9UN72 937 aa18.11■□□□□ 0.49
PKP3-209ENST00000533069 CCDC195A0A1B0GUA6 201 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 LACTBL1A8MY62 500 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 PRR33A8MZF0 331 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 ANKRD63C9JTQ0 380 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 I3L4J1 428 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 SPATA31D3P0C874 917 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 IGFBP6P24592 240 aaPredicted RBP18.1■□□□□ 0.49
PKP3-209ENST00000533069 RAB33AQ14088 237 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 ZBTB6Q15916 424 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 ZBTB41Q5SVQ8 909 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 SPATA31D4Q6ZUB0 917 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 STXBP4Q6ZWJ1 553 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 ZDHHC14Q8IZN3 488 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 PLCD3Q8N3E9 789 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 EDAQ92838 391 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 SUSD3Q96L08 255 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 LRFN3Q9BTN0 628 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 TRIM9Q9C026 710 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 ASB7Q9H672 318 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 TBC1D7Q9P0N9 293 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 RCOR1Q9UKL0 485 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 AGO2Q9UKV8 859 aaKnown RBP18.1■□□□□ 0.49
PKP3-209ENST00000533069 DERAQ9Y315 318 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 MYH11P35749 1972 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 MYH15Q9Y2K3 1946 aa18.1■□□□□ 0.49
PKP3-209ENST00000533069 C2CD4DB7Z1M9 353 aa18.09■□□□□ 0.49
PKP3-209ENST00000533069 H7C4K7 107 aa18.09■□□□□ 0.49
PKP3-209ENST00000533069 RFPL2O75678 378 aa18.09■□□□□ 0.49
PKP3-209ENST00000533069 ZMYND10O75800 440 aa18.09■□□□□ 0.49
PKP3-209ENST00000533069 SP100P23497 879 aaPredicted RBP18.09■□□□□ 0.49
PKP3-209ENST00000533069 MCM4P33991 863 aa18.09■□□□□ 0.49
PKP3-209ENST00000533069 PTPN21Q16825 1174 aa18.09■□□□□ 0.49
PKP3-209ENST00000533069 RESP18Q5W5W9 173 aa18.09■□□□□ 0.49
PKP3-209ENST00000533069 CNNM4Q6P4Q7 775 aa18.09■□□□□ 0.49
PKP3-209ENST00000533069 OTOP3Q7RTS5 596 aa18.09■□□□□ 0.49
PKP3-209ENST00000533069 POMGNT1Q8WZA1 660 aa18.09■□□□□ 0.49
PKP3-209ENST00000533069 SMG7Q92540 1137 aaKnown RBP18.09■□□□□ 0.49
PKP3-209ENST00000533069 STAMQ92783 540 aa18.09■□□□□ 0.49
PKP3-209ENST00000533069 ZNF707Q96C28 371 aaPredicted RBP18.09■□□□□ 0.49
PKP3-209ENST00000533069 ACSF2Q96CM8 615 aaPredicted RBP18.09■□□□□ 0.49
PKP3-209ENST00000533069 TMEM206Q9H813 350 aa18.09■□□□□ 0.49
PKP3-209ENST00000533069 FAM86C2PA6NEL3 165 aa18.08■□□□□ 0.48
PKP3-209ENST00000533069 TISP43B9A030 160 aa18.08■□□□□ 0.48
PKP3-209ENST00000533069 HNRNPA1P09651 372 aaKnown RBP eCLIP18.08■□□□□ 0.48
PKP3-209ENST00000533069 MYBP10242 640 aa18.08■□□□□ 0.48
PKP3-209ENST00000533069 PAX3P23760 479 aa18.08■□□□□ 0.48
PKP3-209ENST00000533069 HOXA9P31269 272 aa18.08■□□□□ 0.48
PKP3-209ENST00000533069 OR1D2P34982 312 aa18.08■□□□□ 0.48
PKP3-209ENST00000533069 CASP5P51878 434 aa18.08■□□□□ 0.48
PKP3-209ENST00000533069 SPAG1Q07617 926 aa18.08■□□□□ 0.48
PKP3-209ENST00000533069 VARS2Q5ST30 1063 aaKnown RBP18.08■□□□□ 0.48
PKP3-209ENST00000533069 SPATA1Q5VX52 437 aa18.08■□□□□ 0.48
PKP3-209ENST00000533069 SLC8B1Q6J4K2 584 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms