RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 PLA2G6O60733 806 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 HEXIM1O94992 359 aaKnown RBP16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 TJP3O95049 919 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 GJB1P08034 283 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 GARTP22102 1010 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 IGFBP4P22692 258 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 RAP1GAPP47736 663 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 TFDP2Q14188 446 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 BBOF1Q8ND07 529 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 ATP2A3Q93084 1043 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 RGPD5Q99666 1765 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 ZC3H4Q9UPT8 1303 aaKnown RBP16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 CD44P16070 742 aaKnown RBP16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 ACO1P21399 889 aaKnown RBP16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 MICALCLQ6ZW33 695 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 MGARPQ8TDB4 240 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 P3H4Q92791 437 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 HAS1Q92839 578 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 SCYL1Q96KG9 808 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 POC1B-GALNT4F8VUJ3 575 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 TADA2BQ86TJ2 420 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 CD302Q8IX05 232 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 DHX38Q92620 1227 aaKnown RBP16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 ELMO3Q96BJ8 720 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 RBM41Q96IZ5 413 aaKnown RBP16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 PBKQ96KB5 322 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 DNAJC17Q9NVM6 304 aaKnown RBP16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 PACSIN2Q9UNF0 486 aaPredicted RBP16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 AFDNP55196 1824 aaKnown RBP16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 MTMR3Q13615 1198 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 C10orf120Q5SQS8 335 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 ANKRD42Q8N9B4 389 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 SP110Q9HB58 689 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 SMYD2Q9NRG4 433 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 SH3BP1Q9Y3L3 701 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 DLG5Q8TDM6 1919 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 DFFAO00273 331 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 DUSP28Q4G0W2 176 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 STKLD1Q8NE28 680 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 TRIM62Q9BVG3 475 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 CAPN11Q9UMQ6 739 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 SNX17Q15036 470 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 FAM76AQ8TAV0 307 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 MTMR9Q96QG7 549 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 MED15Q96RN5 788 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 PLEKHA5Q9HAU0 1116 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 RBPJLQ9UBG7 517 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 AP1G2O75843 785 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 MYL6P60660 151 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 RRP1BQ14684 758 aaKnown RBP16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 BBS9Q3SYG4 887 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 DCAF6Q58WW2 860 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 ADGRF2Q8IZF7 708 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 CDKL2Q92772 493 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 GAD1Q99259 594 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 KCNMB3Q9NPA1 279 aa16.66■□□□□ 0.26
PPFIA1-222ENST00000532504 ACKR2O00590 384 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 HGSO14964 777 aaPredicted RBP16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 PDE1BQ01064 536 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 SPOPLQ6IQ16 392 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 ZNF410Q86VK4 478 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 TMEM199Q8N511 208 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 RSAD1Q9HA92 442 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 CHORDC1Q9UHD1 332 aaPredicted RBP16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 RAB27AP51159 221 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 APLP1P51693 650 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 MKRN4PQ13434 485 aaPredicted RBP16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 CUL2Q13617 745 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 NECAB2Q7Z6G3 386 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 SLC7A14Q8TBB6 771 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 SEMA6BQ9H3T3 888 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 EPB41L5Q9HCM4 733 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 HES2Q9Y543 173 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 PCDHB2Q9Y5E7 798 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 DOT1LQ8TEK3 1739 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 H7C4K7 107 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 NCK2O43639 380 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 INHAP05111 366 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 MYBL1P10243 752 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 DDX53Q86TM3 631 aaKnown RBP16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 ASAP3Q8TDY4 903 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 MAML3Q96JK9 1138 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 MCEEQ96PE7 176 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 GMLQ99445 158 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 HTATIP2Q9BUP3 242 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 RRAGDQ9NQL2 400 aaPredicted RBP16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.65■□□□□ 0.264e-10■■■■□ 23.4
PPFIA1-222ENST00000532504 HPSEQ9Y251 543 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 A0A1B0GTH6 734 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 KRT7P08729 469 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 SNHG28P0DPA3 235 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 AP1B1Q10567 949 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 ITGA7Q13683 1181 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 RUFY4Q6ZNE9 571 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 TRAPPC11Q7Z392 1133 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 PRDM10Q9NQV6 1147 aa16.65■□□□□ 0.26
PPFIA1-222ENST00000532504 NOL9Q5SY16 702 aaKnown RBP16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 FAM171A1Q5VUB5 890 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 SLAIN1Q8ND83 568 aa16.64■□□□□ 0.25
PPFIA1-222ENST00000532504 TAS1R2Q8TE23 839 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms