RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 KRIT1O00522 736 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 OGTO15294 1046 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 RAD51CO43502 376 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 ITGBL1O95965 494 aaPredicted RBP16.29■□□□□ 0.2
SRPRA-206ENST00000532259 FGGP02679 453 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 FGFR4P22455 802 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 MYL6P60660 151 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 ITIH3Q06033 890 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 MCL1Q07820 350 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 TMEM62Q0P6H9 643 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 CUL2Q13617 745 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 EFCAB13Q8IY85 973 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 SCLT1Q96NL6 688 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 RNF14Q9UBS8 474 aa16.29■□□□□ 0.2
SRPRA-206ENST00000532259 CPSF3Q9UKF6 684 aaKnown RBP16.29■□□□□ 0.2
SRPRA-206ENST00000532259 ACKR2O00590 384 aa16.28■□□□□ 0.2
SRPRA-206ENST00000532259 KIAA0391O15091 583 aaKnown RBP16.28■□□□□ 0.2
SRPRA-206ENST00000532259 DDX3YO15523 660 aaKnown RBP16.28■□□□□ 0.2
SRPRA-206ENST00000532259 MEFVO15553 781 aaPredicted RBP16.28■□□□□ 0.2
SRPRA-206ENST00000532259 ATP8B1O43520 1251 aa16.28■□□□□ 0.2
SRPRA-206ENST00000532259 CXCL8P10145 99 aa16.28■□□□□ 0.2
SRPRA-206ENST00000532259 COMTP21964 271 aa16.28■□□□□ 0.2
SRPRA-206ENST00000532259 CARSP49589 748 aaKnown RBP16.28■□□□□ 0.2
SRPRA-206ENST00000532259 CCL14Q16627 93 aa16.28■□□□□ 0.2
SRPRA-206ENST00000532259 DAB2IPQ5VWQ8 1189 aa16.28■□□□□ 0.2
SRPRA-206ENST00000532259 TSHZ1Q6ZSZ6 1077 aa16.28■□□□□ 0.2
SRPRA-206ENST00000532259 SND1Q7KZF4 910 aaKnown RBP eCLIP16.28■□□□□ 0.24e-8■■□□□ 11.8
SRPRA-206ENST00000532259 RHOT2Q8IXI1 618 aa16.28■□□□□ 0.2
SRPRA-206ENST00000532259 ZNF564Q8TBZ8 553 aaPredicted RBP16.28■□□□□ 0.2
SRPRA-206ENST00000532259 CYFIP2Q96F07 1278 aa16.28■□□□□ 0.2
SRPRA-206ENST00000532259 PBKQ96KB5 322 aa16.28■□□□□ 0.2
SRPRA-206ENST00000532259 ATP8B3O60423 1300 aa16.28■□□□□ 0.2
SRPRA-206ENST00000532259 LOC102724159A0A0B4J2E5 919 aa16.28■□□□□ 0.2
SRPRA-206ENST00000532259 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
SRPRA-206ENST00000532259 GAS2O43903 313 aaKnown RBP16.28■□□□□ 0.2
SRPRA-206ENST00000532259 PROZP22891 400 aa16.28■□□□□ 0.2
SRPRA-206ENST00000532259 ZNF157P51786 506 aaPredicted RBP16.28■□□□□ 0.2
SRPRA-206ENST00000532259 PWP2Q15269 919 aaKnown RBP16.28■□□□□ 0.2
SRPRA-206ENST00000532259 MARCH8Q5T0T0 291 aa16.28■□□□□ 0.2
SRPRA-206ENST00000532259 MPZL3Q6UWV2 235 aa16.28■□□□□ 0.2
SRPRA-206ENST00000532259 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.28■□□□□ 0.21e-6■□□□□ 11
SRPRA-206ENST00000532259 CDT1Q9H211 546 aa16.28■□□□□ 0.2
SRPRA-206ENST00000532259 CNOT8Q9UFF9 292 aaKnown RBP16.28■□□□□ 0.2
SRPRA-206ENST00000532259 NFU1Q9UMS0 254 aa16.28■□□□□ 0.2
SRPRA-206ENST00000532259 ZC3H11AO75152 810 aaKnown RBP eCLIP16.27■□□□□ 0.2
SRPRA-206ENST00000532259 TUBBP07437 444 aa16.27■□□□□ 0.2
SRPRA-206ENST00000532259 MMP3P08254 477 aa16.27■□□□□ 0.2
SRPRA-206ENST00000532259 KRT19P08727 400 aa16.27■□□□□ 0.2
SRPRA-206ENST00000532259 HOXC6P09630 235 aa16.27■□□□□ 0.2
SRPRA-206ENST00000532259 CYP2C19P33261 490 aa16.27■□□□□ 0.2
SRPRA-206ENST00000532259 TFDP1Q14186 410 aa16.27■□□□□ 0.2
SRPRA-206ENST00000532259 MAP9Q49MG5 647 aa16.27■□□□□ 0.2
SRPRA-206ENST00000532259 DUSP28Q4G0W2 176 aa16.27■□□□□ 0.2
SRPRA-206ENST00000532259 OR6J1Q8NGC5 347 aa16.27■□□□□ 0.2
SRPRA-206ENST00000532259 RIN2Q8WYP3 895 aaPredicted RBP16.27■□□□□ 0.2
SRPRA-206ENST00000532259 PPME1Q9Y570 386 aa16.27■□□□□ 0.2
SRPRA-206ENST00000532259 DYNC1LI2O43237 492 aaPredicted RBP16.27■□□□□ 0.19
SRPRA-206ENST00000532259 PPFIA4O75335 1185 aa16.27■□□□□ 0.19
SRPRA-206ENST00000532259 CLTAP09496 248 aa16.27■□□□□ 0.19
SRPRA-206ENST00000532259 WEE2P0C1S8 567 aa16.27■□□□□ 0.19
SRPRA-206ENST00000532259 GZMAP12544 262 aa16.27■□□□□ 0.19
SRPRA-206ENST00000532259 MCM3P25205 808 aa16.27■□□□□ 0.19
SRPRA-206ENST00000532259 CLEC16AQ2KHT3 1053 aa16.27■□□□□ 0.19
SRPRA-206ENST00000532259 MTHFD1LQ6UB35 978 aa16.27■□□□□ 0.19
SRPRA-206ENST00000532259 ZNF467Q7Z7K2 595 aaPredicted RBP16.27■□□□□ 0.19
SRPRA-206ENST00000532259 LINC01465Q8N7H1 131 aa16.27■□□□□ 0.19
SRPRA-206ENST00000532259 C2orf40Q9H1Z8 148 aa16.27■□□□□ 0.19
SRPRA-206ENST00000532259 SETD4Q9NVD3 440 aa16.27■□□□□ 0.19
SRPRA-206ENST00000532259 AMACRQ9UHK6 382 aa16.27■□□□□ 0.19
SRPRA-206ENST00000532259 SCP2P22307 547 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 GNA15P30679 374 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 GUCY2FP51841 1108 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 ENPEPQ07075 957 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 AMHR2Q16671 573 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 ZNF484Q5JVG2 852 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 ACAD10Q6JQN1 1059 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 DDX42Q86XP3 938 aaKnown RBP eCLIP16.26■□□□□ 0.194e-7■■■□□ 18.4
SRPRA-206ENST00000532259 RBBP8NLQ8NC74 664 aaPredicted RBP16.26■□□□□ 0.19
SRPRA-206ENST00000532259 ACTRT1Q8TDG2 376 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 NLRP7Q8WX94 980 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 RNPC3Q96LT9 517 aaKnown RBP16.26■□□□□ 0.19
SRPRA-206ENST00000532259 CELF4Q9BZC1 486 aaKnown RBP16.26■□□□□ 0.19
SRPRA-206ENST00000532259 IMPG2Q9BZV3 1241 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 ABHD16BQ9H3Z7 469 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 PCDHB2Q9Y5E7 798 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 THAP12O43422 761 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 SPOPO43791 374 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 GJB6O95452 261 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 TMEM191BP0C7N4 346 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 RRM1P23921 792 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 TNNC1P63316 161 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 ENOSF1Q7L5Y1 443 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 RASAL3Q86YV0 1011 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 EMID1Q96A84 441 aaPredicted RBP16.26■□□□□ 0.19
SRPRA-206ENST00000532259 JPH2Q9BR39 696 aaPredicted RBP16.26■□□□□ 0.19
SRPRA-206ENST00000532259 C11orf70Q9BRQ4 267 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 NXF1Q9UBU9 619 aaKnown RBP16.26■□□□□ 0.19
SRPRA-206ENST00000532259 TMEM59LQ9UK28 342 aa16.26■□□□□ 0.19
SRPRA-206ENST00000532259 KAT6AQ92794 2004 aa16.25■□□□□ 0.19
SRPRA-206ENST00000532259 SART1O43290 800 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms