RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 FZD8Q9H461 694 aa8.63□□□□□ -1.03
NXF1-212ENST00000531872 C2orf42Q9NWW7 574 aa8.63□□□□□ -1.03
NXF1-212ENST00000531872 SNTG2Q9NY99 539 aa8.63□□□□□ -1.03
NXF1-212ENST00000531872 SMG1Q96Q15 3661 aaKnown RBP8.63□□□□□ -1.03
NXF1-212ENST00000531872 SDK1Q7Z5N4 2213 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 IGF2RP11717 2491 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 PKD1L2Q7Z442 2459 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 TTLL13PA6NNM8 815 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 C1QTNF9BB2RNN3 333 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 ZNF263O14978 683 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 TBX3O15119 743 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 AXIN1O15169 862 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 RECQL4O94761 1208 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 B3GAT3O94766 335 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 EPN2O95208 641 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 LYPLA2O95372 231 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 C1QTNF9P0C862 333 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 ATF2P15336 505 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 TKTP29401 623 aaKnown RBP8.62□□□□□ -1.03
NXF1-212ENST00000531872 HOXC13P31276 330 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 VIPR2P41587 438 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 RAP1GAPP47736 663 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 EVCP57679 992 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 CYP4A11Q02928 519 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 CTTNQ14247 550 aaKnown RBP8.62□□□□□ -1.03
NXF1-212ENST00000531872 FAM187BQ17R55 369 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 DGKKQ5KSL6 1271 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 HEATR6Q6AI08 1181 aaKnown RBP8.62□□□□□ -1.03
NXF1-212ENST00000531872 GALNT17Q6IS24 598 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 Q6ZS52 159 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 PDZD4Q76G19 769 aaPredicted RBP8.62□□□□□ -1.03
NXF1-212ENST00000531872 CEP68Q76N32 757 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 KRT25Q7Z3Z0 450 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 TCEAL8Q8IYN2 117 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 FAM177A1Q8N128 213 aaPredicted RBP8.62□□□□□ -1.03
NXF1-212ENST00000531872 C12orf50Q8NA57 414 aaPredicted RBP8.62□□□□□ -1.03
NXF1-212ENST00000531872 KCNB2Q92953 911 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 TMEM121BQ9BXQ6 578 aaPredicted RBP8.62□□□□□ -1.03
NXF1-212ENST00000531872 PDZD7Q9H5P4 517 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 C8orf33Q9H7E9 229 aaPredicted RBP8.62□□□□□ -1.03
NXF1-212ENST00000531872 RBM12Q9NTZ6 932 aaKnown RBP8.62□□□□□ -1.03
NXF1-212ENST00000531872 ANKEF1Q9NU02 776 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 PRMT7Q9NVM4 692 aaPredicted RBP8.62□□□□□ -1.03
NXF1-212ENST00000531872 WASF3Q9UPY6 502 aa8.62□□□□□ -1.03
NXF1-212ENST00000531872 SPAG17Q6Q759 2223 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 CCDC163A0A0D9SF12 145 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 MYBPHLA2RUH7 354 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 HEPACAM2A8MVW5 462 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 N4BP3O15049 544 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 CHADO15335 359 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 TRAPPC3O43617 180 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 SEC24AO95486 1093 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 GCFC2P16383 781 aaKnown RBP8.61□□□□□ -1.03
NXF1-212ENST00000531872 PDIA3P30101 505 aaKnown RBP8.61□□□□□ -1.03
NXF1-212ENST00000531872 ELF1P32519 619 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 RARRES1P49788 294 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 CLCNKBP51801 687 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 EPHA5P54756 1037 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 FCHO2Q0JRZ9 810 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 CCDC6Q16204 474 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 UPP1Q16831 310 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 CYP4A22Q5TCH4 519 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 CDCA2Q69YH5 1023 aaPredicted RBP8.61□□□□□ -1.03
NXF1-212ENST00000531872 NCAPH2Q6IBW4 605 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 TXNDC11Q6PKC3 985 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 CACNA2D4Q7Z3S7 1137 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 C3orf58Q8NDZ4 430 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 ZSCAN18Q8TBC5 510 aaPredicted RBP8.61□□□□□ -1.03
NXF1-212ENST00000531872 GAB3Q8WWW8 586 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 E2F7Q96AV8 911 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 UROC1Q96N76 676 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 PPP1R10Q96QC0 940 aaKnown RBP8.61□□□□□ -1.03
NXF1-212ENST00000531872 HSD17B14Q9BPX1 270 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 POLR3FQ9H1D9 316 aaPredicted RBP8.61□□□□□ -1.03
NXF1-212ENST00000531872 NCOA5Q9HCD5 579 aaKnown RBP8.61□□□□□ -1.03
NXF1-212ENST00000531872 PCDHGA5Q9Y5G8 931 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 INSL5Q9Y5Q6 135 aa8.61□□□□□ -1.03
NXF1-212ENST00000531872 PDCD11Q14690 1871 aaKnown RBP8.6□□□□□ -1.03
NXF1-212ENST00000531872 TMEM8BA6NDV4 472 aa8.6□□□□□ -1.03
NXF1-212ENST00000531872 I3L4J1 428 aa8.6□□□□□ -1.03
NXF1-212ENST00000531872 PRRG1O14668 218 aa8.6□□□□□ -1.03
NXF1-212ENST00000531872 DEXIO95424 95 aa8.6□□□□□ -1.03
NXF1-212ENST00000531872 BRCC3P46736 316 aa8.6□□□□□ -1.03
NXF1-212ENST00000531872 SOX9P48436 509 aa8.6□□□□□ -1.03
NXF1-212ENST00000531872 CCT2P78371 535 aaKnown RBP8.6□□□□□ -1.03
NXF1-212ENST00000531872 SSRP1Q08945 709 aaKnown RBP8.6□□□□□ -1.03
NXF1-212ENST00000531872 CCINQ13939 588 aa8.6□□□□□ -1.03
NXF1-212ENST00000531872 MRPL58Q14197 206 aaKnown RBP8.6□□□□□ -1.03
NXF1-212ENST00000531872 TPGS2Q68CL5 300 aa8.6□□□□□ -1.03
NXF1-212ENST00000531872 PSAPL1Q6NUJ1 521 aa8.6□□□□□ -1.03
NXF1-212ENST00000531872 NEK8Q86SG6 692 aa8.6□□□□□ -1.03
NXF1-212ENST00000531872 KBTBD6Q86V97 674 aa8.6□□□□□ -1.03
NXF1-212ENST00000531872 RALGPS2Q86X27 583 aaPredicted RBP8.6□□□□□ -1.03
NXF1-212ENST00000531872 NOSTRINQ8IVI9 506 aa8.6□□□□□ -1.03
NXF1-212ENST00000531872 TPH2Q8IWU9 490 aa8.6□□□□□ -1.03
NXF1-212ENST00000531872 TRIM22Q8IYM9 498 aa8.6□□□□□ -1.03
NXF1-212ENST00000531872 HS6ST3Q8IZP7 471 aa8.6□□□□□ -1.03
NXF1-212ENST00000531872 SYNPOQ8N3V7 929 aa8.6□□□□□ -1.03
NXF1-212ENST00000531872 LEMD2Q8NC56 503 aa8.6□□□□□ -1.03
NXF1-212ENST00000531872 CSGALNACT1Q8TDX6 532 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms