RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 CACNB1Q02641 598 aaPredicted RBP17.25■□□□□ 0.35
CPSF1-205ENST00000531042 MCL1Q07820 350 aa17.25■□□□□ 0.35
CPSF1-205ENST00000531042 SLC10A6Q3KNW5 377 aa17.25■□□□□ 0.35
CPSF1-205ENST00000531042 SEZ6Q53EL9 994 aa17.25■□□□□ 0.35
CPSF1-205ENST00000531042 VARS2Q5ST30 1063 aaKnown RBP17.25■□□□□ 0.35
CPSF1-205ENST00000531042 SLC8B1Q6J4K2 584 aa17.25■□□□□ 0.35
CPSF1-205ENST00000531042 PARM1Q6UWI2 310 aa17.25■□□□□ 0.35
CPSF1-205ENST00000531042 CCDC105Q8IYK2 499 aa17.25■□□□□ 0.35
CPSF1-205ENST00000531042 ZNF461Q8TAF7 563 aa17.25■□□□□ 0.35
CPSF1-205ENST00000531042 ITFG1Q8TB96 612 aa17.25■□□□□ 0.35
CPSF1-205ENST00000531042 GPR152Q8TDT2 470 aa17.25■□□□□ 0.35
CPSF1-205ENST00000531042 FGF13Q92913 245 aa17.25■□□□□ 0.35
CPSF1-205ENST00000531042 FGF14Q92915 247 aa17.25■□□□□ 0.35
CPSF1-205ENST00000531042 HCFC1R1Q9NWW0 138 aa17.25■□□□□ 0.35
CPSF1-205ENST00000531042 LARSQ9P2J5 1176 aaKnown RBP17.25■□□□□ 0.35
CPSF1-205ENST00000531042 DNMT3BQ9UBC3 853 aaKnown RBP17.25■□□□□ 0.35
CPSF1-205ENST00000531042 CA14Q9ULX7 337 aa17.25■□□□□ 0.35
CPSF1-205ENST00000531042 DMDP11532 3685 aa17.25■□□□□ 0.35
CPSF1-205ENST00000531042 MYH15Q9Y2K3 1946 aa17.24■□□□□ 0.35
CPSF1-205ENST00000531042 STK25O00506 426 aa17.24■□□□□ 0.35
CPSF1-205ENST00000531042 SYN3O14994 580 aa17.24■□□□□ 0.35
CPSF1-205ENST00000531042 CLDN3O15551 220 aa17.24■□□□□ 0.35
CPSF1-205ENST00000531042 NBL1P41271 181 aa17.24■□□□□ 0.35
CPSF1-205ENST00000531042 NCKAP1LP55160 1127 aa17.24■□□□□ 0.35
CPSF1-205ENST00000531042 ROR1Q01973 937 aa17.24■□□□□ 0.35
CPSF1-205ENST00000531042 MRPL58Q14197 206 aaKnown RBP17.24■□□□□ 0.35
CPSF1-205ENST00000531042 KCNN1Q92952 543 aa17.24■□□□□ 0.35
CPSF1-205ENST00000531042 TBC1D32Q96NH3 1257 aa17.24■□□□□ 0.35
CPSF1-205ENST00000531042 RPP25Q9BUL9 199 aaKnown RBP17.24■□□□□ 0.35
CPSF1-205ENST00000531042 HAPLN2Q9GZV7 340 aa17.24■□□□□ 0.35
CPSF1-205ENST00000531042 SLC2A4RGQ9NR83 387 aa17.24■□□□□ 0.35
CPSF1-205ENST00000531042 ODF2LQ9ULJ1 636 aa17.24■□□□□ 0.35
CPSF1-205ENST00000531042 NUB1Q9Y5A7 615 aa17.24■□□□□ 0.35
CPSF1-205ENST00000531042 VPS13AQ96RL7 3174 aa17.24■□□□□ 0.35
CPSF1-205ENST00000531042 H0YCG3 227 aa17.23■□□□□ 0.35
CPSF1-205ENST00000531042 ABLIM3O94929 683 aa17.23■□□□□ 0.35
CPSF1-205ENST00000531042 UBA7P41226 1012 aa17.23■□□□□ 0.35
CPSF1-205ENST00000531042 PABPC1LQ4VXU2 614 aaKnown RBP17.23■□□□□ 0.35
CPSF1-205ENST00000531042 MTSS1LQ765P7 747 aa17.23■□□□□ 0.35
CPSF1-205ENST00000531042 HAUS6Q7Z4H7 955 aa17.23■□□□□ 0.35
CPSF1-205ENST00000531042 GPBP1Q86WP2 473 aa17.23■□□□□ 0.35
CPSF1-205ENST00000531042 DTWD2Q8NBA8 298 aa17.23■□□□□ 0.35
CPSF1-205ENST00000531042 LRRC15Q8TF66 581 aa17.23■□□□□ 0.35
CPSF1-205ENST00000531042 CALML4Q96GE6 196 aa17.23■□□□□ 0.35
CPSF1-205ENST00000531042 SUSD3Q96L08 255 aa17.23■□□□□ 0.35
CPSF1-205ENST00000531042 TBC1D17Q9HA65 648 aa17.23■□□□□ 0.35
CPSF1-205ENST00000531042 KCNH3Q9ULD8 1083 aa17.23■□□□□ 0.35
CPSF1-205ENST00000531042 ARHGEF37A1IGU5 675 aa17.22■□□□□ 0.35
CPSF1-205ENST00000531042 WDR27A2RRH5 827 aa17.22■□□□□ 0.35
CPSF1-205ENST00000531042 H7C4K7 107 aa17.22■□□□□ 0.35
CPSF1-205ENST00000531042 BMP15O95972 392 aa17.22■□□□□ 0.35
CPSF1-205ENST00000531042 CXCL8P10145 99 aa17.22■□□□□ 0.35
CPSF1-205ENST00000531042 ATF2P15336 505 aa17.22■□□□□ 0.35
CPSF1-205ENST00000531042 RFX1P22670 979 aa17.22■□□□□ 0.35
CPSF1-205ENST00000531042 MATR3P43243 847 aaKnown RBP eCLIP17.22■□□□□ 0.35
CPSF1-205ENST00000531042 GPC5P78333 572 aa17.22■□□□□ 0.35
CPSF1-205ENST00000531042 PHLDB3Q6NSJ2 640 aa17.22■□□□□ 0.35
CPSF1-205ENST00000531042 BRAPQ7Z569 592 aa17.22■□□□□ 0.35
CPSF1-205ENST00000531042 BICD1Q96G01 975 aa17.22■□□□□ 0.35
CPSF1-205ENST00000531042 REEP2Q9BRK0 252 aa17.22■□□□□ 0.35
CPSF1-205ENST00000531042 PLEKHA5Q9HAU0 1116 aa17.22■□□□□ 0.35
CPSF1-205ENST00000531042 ARHGEF3Q9NR81 526 aa17.22■□□□□ 0.35
CPSF1-205ENST00000531042 BLOC1S4Q9NUP1 217 aa17.22■□□□□ 0.35
CPSF1-205ENST00000531042 TUBGCP4Q9UGJ1 667 aa17.22■□□□□ 0.35
CPSF1-205ENST00000531042 FBXL5Q9UKA1 691 aa17.22■□□□□ 0.35
CPSF1-205ENST00000531042 TTC26A0AVF1 554 aa17.21■□□□□ 0.35
CPSF1-205ENST00000531042 RHOP08100 348 aa17.21■□□□□ 0.35
CPSF1-205ENST00000531042 CLTAP09496 248 aa17.21■□□□□ 0.35
CPSF1-205ENST00000531042 ELF1P32519 619 aa17.21■□□□□ 0.35
CPSF1-205ENST00000531042 MCM4P33991 863 aa17.21■□□□□ 0.35
CPSF1-205ENST00000531042 LONP1P36776 959 aaKnown RBP17.21■□□□□ 0.35
CPSF1-205ENST00000531042 ZNF131P52739 623 aa17.21■□□□□ 0.35
CPSF1-205ENST00000531042 ARPP19P56211 112 aa17.21■□□□□ 0.35
CPSF1-205ENST00000531042 GRIN1Q05586 938 aa17.21■□□□□ 0.35
CPSF1-205ENST00000531042 DHX8Q14562 1220 aaKnown RBP17.21■□□□□ 0.35
CPSF1-205ENST00000531042 ANGPT1Q15389 498 aa17.21■□□□□ 0.35
CPSF1-205ENST00000531042 CTXN3Q4LDR2 81 aa17.21■□□□□ 0.35
CPSF1-205ENST00000531042 NPAS3Q8IXF0 933 aa17.21■□□□□ 0.35
CPSF1-205ENST00000531042 TCEAL8Q8IYN2 117 aa17.21■□□□□ 0.35
CPSF1-205ENST00000531042 AVENQ9NQS1 362 aaPredicted RBP17.21■□□□□ 0.35
CPSF1-205ENST00000531042 TBX20Q9UMR3 447 aa17.21■□□□□ 0.35
CPSF1-205ENST00000531042 MRPS23Q9Y3D9 190 aaKnown RBP17.21■□□□□ 0.35
CPSF1-205ENST00000531042 CFAP54Q96N23 3096 aa17.21■□□□□ 0.35
CPSF1-205ENST00000531042 PRRG1O14668 218 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 FAM13AO94988 1023 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 SEC24AO95486 1093 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 PIGRP01833 764 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 LRG1P02750 347 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 PTPN2P17706 415 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 PLCG1P19174 1290 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 SCP2P22307 547 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 LRPAP1P30533 357 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 TNFSF9P41273 254 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 LIG4P49917 911 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 SPAG1Q07617 926 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 MCM6Q14566 821 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 KARSQ15046 597 aaKnown RBP17.2■□□□□ 0.34
CPSF1-205ENST00000531042 SF3A1Q15459 793 aaKnown RBP17.2■□□□□ 0.34
CPSF1-205ENST00000531042 ZBTB6Q15916 424 aa17.2■□□□□ 0.34
CPSF1-205ENST00000531042 SLC5A9Q2M3M2 681 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms