RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 RFPL2O75678 378 aa13.15□□□□□ -0.3
COPB1-206ENST00000529210 YEATS4O95619 227 aa13.15□□□□□ -0.3
COPB1-206ENST00000529210 RPL17P18621 184 aaKnown RBP13.15□□□□□ -0.3
COPB1-206ENST00000529210 LIG4P49917 911 aa13.15□□□□□ -0.3
COPB1-206ENST00000529210 MRPL58Q14197 206 aaKnown RBP13.15□□□□□ -0.3
COPB1-206ENST00000529210 DHX8Q14562 1220 aaKnown RBP13.15□□□□□ -0.3
COPB1-206ENST00000529210 SPECC1Q5M775 1068 aa13.15□□□□□ -0.3
COPB1-206ENST00000529210 SLC8B1Q6J4K2 584 aa13.15□□□□□ -0.3
COPB1-206ENST00000529210 SLC39A4Q6P5W5 647 aa13.15□□□□□ -0.3
COPB1-206ENST00000529210 SV2BQ7L1I2 683 aa13.15□□□□□ -0.3
COPB1-206ENST00000529210 ZNF720Q7Z2F6 126 aa13.15□□□□□ -0.3
COPB1-206ENST00000529210 PALB2Q86YC2 1186 aa13.15□□□□□ -0.3
COPB1-206ENST00000529210 HSCBQ8IWL3 235 aa13.15□□□□□ -0.3
COPB1-206ENST00000529210 CD302Q8IX05 232 aa13.15□□□□□ -0.3
COPB1-206ENST00000529210 DDX12PQ92771 950 aa13.15□□□□□ -0.3
COPB1-206ENST00000529210 STAMQ92783 540 aa13.15□□□□□ -0.3
COPB1-206ENST00000529210 SUSD3Q96L08 255 aa13.15□□□□□ -0.3
COPB1-206ENST00000529210 OLFML3Q9NRN5 406 aa13.15□□□□□ -0.3
COPB1-206ENST00000529210 EPS15L1Q9UBC2 864 aa13.15□□□□□ -0.3
COPB1-206ENST00000529210 MYMKA6NI61 221 aa13.14□□□□□ -0.31
COPB1-206ENST00000529210 KRT18P05783 430 aaKnown RBP13.14□□□□□ -0.31
COPB1-206ENST00000529210 CXCL8P10145 99 aa13.14□□□□□ -0.31
COPB1-206ENST00000529210 GAP43P17677 238 aa13.14□□□□□ -0.31
COPB1-206ENST00000529210 PAX3P23760 479 aa13.14□□□□□ -0.31
COPB1-206ENST00000529210 TKTP29401 623 aaKnown RBP13.14□□□□□ -0.31
COPB1-206ENST00000529210 BRCC3P46736 316 aa13.14□□□□□ -0.31
COPB1-206ENST00000529210 AARSP49588 968 aaKnown RBP eCLIP13.14□□□□□ -0.314e-7■□□□□ 11.3
COPB1-206ENST00000529210 MTMR3Q13615 1198 aa13.14□□□□□ -0.31
COPB1-206ENST00000529210 ATL3Q6DD88 541 aa13.14□□□□□ -0.31
COPB1-206ENST00000529210 CEP57Q86XR8 500 aa13.14□□□□□ -0.31
COPB1-206ENST00000529210 SMG7Q92540 1137 aaKnown RBP13.14□□□□□ -0.31
COPB1-206ENST00000529210 NXPE3Q969Y0 559 aa13.14□□□□□ -0.31
COPB1-206ENST00000529210 C18orf25Q96B23 403 aaPredicted RBP13.14□□□□□ -0.31
COPB1-206ENST00000529210 BICD1Q96G01 975 aa13.14□□□□□ -0.31
COPB1-206ENST00000529210 ZNF396Q96N95 335 aaPredicted RBP13.14□□□□□ -0.31
COPB1-206ENST00000529210 TSHZ2Q9NRE2 1034 aa13.14□□□□□ -0.31
COPB1-206ENST00000529210 RAPGEFL1Q9UHV5 662 aa13.14□□□□□ -0.31
COPB1-206ENST00000529210 CPSF3Q9UKF6 684 aaKnown RBP13.14□□□□□ -0.31
COPB1-206ENST00000529210 UBQLN1Q9UMX0 589 aaKnown RBP13.14□□□□□ -0.31
COPB1-206ENST00000529210 MUC6Q6W4X9 2439 aa13.13□□□□□ -0.31
COPB1-206ENST00000529210 ANK1P16157 1881 aa13.13□□□□□ -0.31
COPB1-206ENST00000529210 A0A087X0B3 334 aa13.13□□□□□ -0.31
COPB1-206ENST00000529210 M0QZQ0 153 aa13.13□□□□□ -0.31
COPB1-206ENST00000529210 SPTLC2O15270 562 aa13.13□□□□□ -0.31
COPB1-206ENST00000529210 ADAM12O43184 909 aa13.13□□□□□ -0.31
COPB1-206ENST00000529210 XPOTO43592 962 aaKnown RBP13.13□□□□□ -0.31
COPB1-206ENST00000529210 N4BP1O75113 896 aaKnown RBP13.13□□□□□ -0.31
COPB1-206ENST00000529210 ABLIM3O94929 683 aa13.13□□□□□ -0.31
COPB1-206ENST00000529210 HARSP12081 509 aaKnown RBP13.13□□□□□ -0.31
COPB1-206ENST00000529210 SP100P23497 879 aaPredicted RBP13.13□□□□□ -0.31
COPB1-206ENST00000529210 NMT1P30419 496 aaKnown RBP13.13□□□□□ -0.31
COPB1-206ENST00000529210 OR1D2P34982 312 aa13.13□□□□□ -0.31
COPB1-206ENST00000529210 PLA2G5P39877 138 aa13.13□□□□□ -0.31
COPB1-206ENST00000529210 CEBPZQ03701 1054 aaKnown RBP13.13□□□□□ -0.31
COPB1-206ENST00000529210 PPP2R3AQ06190 1150 aa13.13□□□□□ -0.31
COPB1-206ENST00000529210 ENOX2Q16206 610 aaKnown RBP13.13□□□□□ -0.31
COPB1-206ENST00000529210 LIN9Q5TKA1 542 aa13.13□□□□□ -0.31
COPB1-206ENST00000529210 SLFN12LQ6IEE8 588 aa13.13□□□□□ -0.31
COPB1-206ENST00000529210 CNNM4Q6P4Q7 775 aa13.13□□□□□ -0.31
COPB1-206ENST00000529210 RSPO2Q6UXX9 243 aaPredicted RBP13.13□□□□□ -0.31
COPB1-206ENST00000529210 SFR1Q86XK3 245 aa13.13□□□□□ -0.31
COPB1-206ENST00000529210 TNMDQ9H2S6 317 aa13.13□□□□□ -0.31
COPB1-206ENST00000529210 CUEDC2Q9H467 287 aa13.13□□□□□ -0.31
COPB1-206ENST00000529210 RPF1Q9H9Y2 349 aaKnown RBP13.13□□□□□ -0.31
COPB1-206ENST00000529210 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.13□□□□□ -0.311e-34■■■■□ 19.8
COPB1-206ENST00000529210 IGSF9Q9P2J2 1179 aa13.13□□□□□ -0.31
COPB1-206ENST00000529210 MAFFQ9ULX9 164 aa13.13□□□□□ -0.31
COPB1-206ENST00000529210 DERAQ9Y315 318 aa13.13□□□□□ -0.31
COPB1-206ENST00000529210 ZFP37Q9Y6Q3 630 aaPredicted RBP13.13□□□□□ -0.31
COPB1-206ENST00000529210 ZDBF2Q9HCK1 2354 aa13.13□□□□□ -0.31
COPB1-206ENST00000529210 KMT2EQ8IZD2 1858 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 ARHGEF37A1IGU5 675 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 LACTBL1A8MY62 500 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 H7C4K7 107 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 C8AP07357 584 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 SPATA31D3P0C874 917 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 ZSCAN22P10073 491 aaPredicted RBP13.12□□□□□ -0.31
COPB1-206ENST00000529210 TNFSF9P41273 254 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 STAT6P42226 847 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 ALCAMQ13740 583 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 POSTNQ15063 836 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 STK38Q15208 465 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 E2F4Q16254 413 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 SEZ6Q53EL9 994 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 VARS2Q5ST30 1063 aaKnown RBP13.12□□□□□ -0.31
COPB1-206ENST00000529210 SPATA1Q5VX52 437 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 SPATA31D4Q6ZUB0 917 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 DYMQ7RTS9 669 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 GLYCTKQ8IVS8 523 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 FBXL6Q8N531 539 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 ZNF461Q8TAF7 563 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 PBXIP1Q96AQ6 731 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 KIF12Q96FN5 646 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 MSTO1Q9BUK6 570 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 OXCT2Q9BYC2 517 aaPredicted RBP13.12□□□□□ -0.31
COPB1-206ENST00000529210 ASB7Q9H672 318 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 KBTBD4Q9NVX7 518 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 LIMD1Q9UGP4 676 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 C2CD2Q9Y426 696 aa13.12□□□□□ -0.31
COPB1-206ENST00000529210 CDY1Q9Y6F8 540 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms