RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 SLC28A3Q9HAS3 691 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 TBC1D13Q9NVG8 400 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 DPP3Q9NY33 737 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 FAN1Q9Y2M0 1017 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 HES2Q9Y543 173 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 NUB1Q9Y5A7 615 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 CEP290O15078 2479 aa8.56□□□□□ -1.04
SSBP3-211ENST00000528787 SF3B1O75533 1304 aaKnown RBP eCLIP8.55□□□□□ -1.044e-6■■■■■ 130.7
SSBP3-211ENST00000528787 TTLL13PA6NNM8 815 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 POMCP01189 267 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 EDN1P05305 212 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 KRT19P08727 400 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 CCDC172P0C7W6 258 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 IBSPP21815 317 aaPredicted RBP8.55□□□□□ -1.04
SSBP3-211ENST00000528787 TNFSF9P41273 254 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 TAF6P49848 677 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 MYL7Q01449 175 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 SHHQ15465 462 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 LRIT3Q3SXY7 679 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 ZACNQ401N2 412 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 VWA3BQ502W6 1294 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 CLLU1OSQ5K130 101 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 JADE1Q6IE81 842 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 C11orf57Q6ZUT1 292 aaPredicted RBP8.55□□□□□ -1.04
SSBP3-211ENST00000528787 METTL23Q86XA0 190 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 TRIM59Q8IWR1 403 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 CRIPAKQ8N1N5 446 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 TMEM86AQ8N2M4 240 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 APPL2Q8NEU8 664 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 SP7Q8TDD2 431 aaPredicted RBP8.55□□□□□ -1.04
SSBP3-211ENST00000528787 LINC01599Q8WXQ3 324 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 CLP1Q92989 425 aaKnown RBP8.55□□□□□ -1.04
SSBP3-211ENST00000528787 CASD1Q96PB1 797 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 PPP1R10Q96QC0 940 aaKnown RBP8.55□□□□□ -1.04
SSBP3-211ENST00000528787 NUP58Q9BVL2 599 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 NDST4Q9H3R1 872 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 CBX8Q9HC52 389 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 PDE11AQ9HCR9 933 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 FANCLQ9NW38 375 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 SPG21Q9NZD8 308 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 LIMA1Q9UHB6 759 aaKnown RBP8.55□□□□□ -1.04
SSBP3-211ENST00000528787 DPP7Q9UHL4 492 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 LZTS1Q9Y250 596 aa8.55□□□□□ -1.04
SSBP3-211ENST00000528787 NLRC5Q86WI3 1866 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 TISP43B9A030 160 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 PODXLO00592 558 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 SYN3O14994 580 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 HUS1O60921 280 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 TADA2AO75478 443 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 FGFR1P11362 822 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 ODC1P11926 461 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 ZNF18P17022 549 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 PIK3CAP42336 1068 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 OR1G1P47890 313 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 FMO5P49326 533 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 SCNN1GP51170 649 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 PMS1P54277 932 aaKnown RBP8.54□□□□□ -1.04
SSBP3-211ENST00000528787 TNNC1P63316 161 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 DEFB103AP81534 67 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 DSC1Q08554 894 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 KCNH2Q12809 1159 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 NCOA4Q13772 614 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 TRIM14Q14142 442 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 IQCB1Q15051 598 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 ZBTB6Q15916 424 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 PTPROQ16827 1216 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 UPP1Q16831 310 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 EXOC3L4Q17RC7 722 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 ZNF699Q32M78 642 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 ZNF667Q5HYK9 610 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 GPR153Q6NV75 609 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 TRAPPC11Q7Z392 1133 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 DHX40Q8IX18 779 aaKnown RBP8.54□□□□□ -1.04
SSBP3-211ENST00000528787 CEP120Q8N960 986 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 LPPQ93052 612 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 SLC35C1Q96A29 364 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 BORCS6Q96GS4 357 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 ZFP42Q96MM3 310 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 TGS1Q96RS0 853 aaKnown RBP8.54□□□□□ -1.04
SSBP3-211ENST00000528787 HAPLN2Q9GZV7 340 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 LMAN2LQ9H0V9 348 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 NUCKS1Q9H1E3 243 aaKnown RBP8.54□□□□□ -1.04
SSBP3-211ENST00000528787 VRTNQ9H8Y1 702 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.54□□□□□ -1.04
SSBP3-211ENST00000528787 RAB20Q9NX57 234 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 KLK14Q9P0G3 267 aa8.54□□□□□ -1.04
SSBP3-211ENST00000528787 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.54□□□□□ -1.04
SSBP3-211ENST00000528787 GOLGA6L3A6NEY3 463 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 LRRIQ3A6PVS8 624 aaPredicted RBP8.53□□□□□ -1.04
SSBP3-211ENST00000528787 LGALS16A8MUM7 142 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 C5orf67F2Z3F1 127 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 H7C4K7 107 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 PIRO00625 290 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 PTGESO14684 152 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 B3GAT3O94766 335 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 C1RP00736 705 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 NFICP08651 508 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 BMPR1AP36894 532 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 LHX1P48742 406 aa8.53□□□□□ -1.04
SSBP3-211ENST00000528787 CASP4P49662 377 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms