RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 ZNF568Q3ZCX4 644 aa15.81■□□□□ 0.12
ECHDC1-220ENST00000528402 LIN9Q5TKA1 542 aa15.81■□□□□ 0.12
ECHDC1-220ENST00000528402 MTHFD1LQ6UB35 978 aa15.81■□□□□ 0.12
ECHDC1-220ENST00000528402 ZNF410Q86VK4 478 aa15.81■□□□□ 0.12
ECHDC1-220ENST00000528402 DNAAF5Q86Y56 855 aa15.81■□□□□ 0.12
ECHDC1-220ENST00000528402 ZNF564Q8TBZ8 553 aaPredicted RBP15.81■□□□□ 0.12
ECHDC1-220ENST00000528402 AENQ8WTP8 325 aaKnown RBP15.81■□□□□ 0.12
ECHDC1-220ENST00000528402 ZNF653Q96CK0 615 aa15.81■□□□□ 0.12
ECHDC1-220ENST00000528402 C16orf70Q9BSU1 422 aa15.81■□□□□ 0.12
ECHDC1-220ENST00000528402 ASB7Q9H672 318 aa15.81■□□□□ 0.12
ECHDC1-220ENST00000528402 TUT1Q9H6E5 874 aaKnown RBP15.81■□□□□ 0.12
ECHDC1-220ENST00000528402 RRAGCQ9HB90 399 aa15.81■□□□□ 0.12
ECHDC1-220ENST00000528402 DMGDHQ9UI17 866 aaKnown RBP15.81■□□□□ 0.12
ECHDC1-220ENST00000528402 COG5Q9UP83 839 aa15.81■□□□□ 0.12
ECHDC1-220ENST00000528402 KRIT1O00522 736 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 TMEM191BP0C7N4 346 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 HARSP12081 509 aaKnown RBP15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 ADCYAP1R1P41586 468 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 NSFP46459 744 aaKnown RBP15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 DNA2P51530 1060 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 WNT7BP56706 349 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 INHBEP58166 350 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 CENPCQ03188 943 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 PAK2Q13177 524 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 HSP90B2PQ58FF3 399 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 ZBTB41Q5SVQ8 909 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 LMBRD2Q68DH5 695 aaPredicted RBP15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 NT5DC4Q86YG4 428 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 CD302Q8IX05 232 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 MCOLN2Q8IZK6 566 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 OR5B17Q8NGF7 314 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 CAVIN3Q969G5 261 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 PKNOX2Q96KN3 472 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 RUNDC3BQ96NL0 473 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 KRT12Q99456 494 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 NUP85Q9BW27 656 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 ZNF518BQ9C0D4 1074 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 MRPL47Q9HD33 250 aaKnown RBP15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 RNF216Q9NWF9 866 aaPredicted RBP15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 CNOT8Q9UFF9 292 aaKnown RBP15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 NOC2LQ9Y3T9 749 aaKnown RBP15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 PTPRJQ12913 1337 aa15.8■□□□□ 0.12
ECHDC1-220ENST00000528402 AARSP49588 968 aaKnown RBP eCLIP15.79■□□□□ 0.12
ECHDC1-220ENST00000528402 CLCN3P51790 818 aa15.79■□□□□ 0.12
ECHDC1-220ENST00000528402 CUL1Q13616 776 aa15.79■□□□□ 0.12
ECHDC1-220ENST00000528402 UBR7Q8N806 425 aa15.79■□□□□ 0.12
ECHDC1-220ENST00000528402 OR6J1Q8NGC5 347 aa15.79■□□□□ 0.12
ECHDC1-220ENST00000528402 TRAPPC12Q8WVT3 735 aa15.79■□□□□ 0.12
ECHDC1-220ENST00000528402 PTPN18Q99952 460 aa15.79■□□□□ 0.12
ECHDC1-220ENST00000528402 NIF3L1Q9GZT8 377 aa15.79■□□□□ 0.12
ECHDC1-220ENST00000528402 IFT122Q9HBG6 1241 aa15.79■□□□□ 0.12
ECHDC1-220ENST00000528402 APOBEC3GQ9HC16 384 aaKnown RBP15.79■□□□□ 0.12
ECHDC1-220ENST00000528402 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.79■□□□□ 0.122e-6■■■■■ 96.1
ECHDC1-220ENST00000528402 EHD2Q9NZN4 543 aa15.79■□□□□ 0.12
ECHDC1-220ENST00000528402 HEXIM1O94992 359 aaKnown RBP15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 MMP3P08254 477 aa15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 SMPD1P17405 629 aa15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 GNA15P30679 374 aa15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 ATICP31939 592 aa15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 TNFSF9P41273 254 aa15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 MAP2K5Q13163 448 aa15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 MESDQ14696 234 aa15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 TMEM270Q6UE05 265 aa15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 PHF13Q86YI8 300 aaPredicted RBP15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 RBBP8NLQ8NC74 664 aaPredicted RBP15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 WHAMMQ8TF30 809 aa15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 ZSWIM1Q9BR11 485 aa15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 CDT1Q9H211 546 aa15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 GOLPH3Q9H4A6 298 aa15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 SMARCAL1Q9NZC9 954 aa15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 AKT3Q9Y243 479 aa15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 Q9Y3F1 56 aa15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 NUB1Q9Y5A7 615 aa15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 PCDHA3Q9Y5H8 950 aa15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 SCINQ9Y6U3 715 aa15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 TRPM7Q96QT4 1865 aa15.78■□□□□ 0.12
ECHDC1-220ENST00000528402 TTLL13PA6NNM8 815 aa15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 SART1O43290 800 aaKnown RBP15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 LSM8O95777 96 aaKnown RBP15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 CST3P01034 146 aaPredicted RBP15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 COMTP21964 271 aa15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 TNNT3P45378 269 aaPredicted RBP15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 ZNF132P52740 706 aa15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 IGBP1P78318 339 aa15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 C1QBPQ07021 282 aaKnown RBP15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 MKRN3Q13064 507 aaKnown RBP15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 PPFIA1Q13136 1202 aa15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 MORN1Q5T089 497 aa15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 TMEM63BQ5T3F8 832 aa15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 SEL1L2Q5TEA6 688 aa15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 ALS2CLQ60I27 953 aa15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 EFCAB13Q8IY85 973 aa15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 THNSL1Q8IYQ7 743 aa15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 TTC39CQ8N584 583 aa15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 FAM71BQ8TC56 605 aa15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 HDAC7Q8WUI4 952 aa15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 MAIP1Q8WWC4 291 aa15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 RNPC3Q96LT9 517 aaKnown RBP15.77■□□□□ 0.12
ECHDC1-220ENST00000528402 EPB41L5Q9HCM4 733 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms